Hera001304.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Heliconius erato
Gene Symbol
-
Assembly
None
Location
Hel:1119079-1140765[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 3.3e-05 0.0025 17.8 2.2 1 23 221 243 221 243 0.97
2 17 0.0024 0.18 12.0 0.7 1 20 249 268 249 271 0.94
3 17 9e-06 0.00069 19.6 5.4 1 23 290 312 290 312 0.98
4 17 7.7e-05 0.0059 16.7 4.7 1 23 318 340 318 340 0.99
5 17 4.2e-05 0.0032 17.5 6.7 1 23 374 396 374 396 0.97
6 17 9.4e-05 0.0072 16.4 5.6 1 23 402 424 402 424 0.97
7 17 2e-07 1.5e-05 24.8 1.9 1 23 430 452 430 452 0.98
8 17 1.9e-05 0.0015 18.6 8.1 1 23 458 480 458 480 0.98
9 17 3.2e-06 0.00025 21.0 6.6 1 23 486 508 486 508 0.98
10 17 2.8e-06 0.00021 21.2 5.8 1 23 514 536 514 536 0.98
11 17 1.7e-05 0.0013 18.8 6.1 1 23 542 564 542 564 0.97
12 17 9e-06 0.00069 19.6 7.1 1 23 570 592 570 592 0.97
13 17 1.2e-06 9.6e-05 22.3 6.0 1 23 598 620 598 620 0.98
14 17 1.2e-05 0.00094 19.2 7.8 1 23 626 648 626 648 0.97
15 17 1e-06 7.7e-05 22.6 4.1 1 23 654 676 654 676 0.96
16 17 0.00052 0.039 14.1 0.6 1 23 683 705 683 705 0.96
17 17 0.00069 0.053 13.7 3.8 1 23 716 738 716 738 0.99

Sequence Information

Coding Sequence
ATGCAGCAGCAGCTGATGGCGGCCGCGCGTCCCGAACACGCAAACCAACAGATTCAACTGACAGTAAGCGAGGATGGCATAGTGACAGTGGTGGAGCCTGGCGGTGGTAGCGGGAAGCTCGTCGAGAAGGAAGAGCTCCATGAAACAATCAAAATGCCTACAGACCACACGCTCACTGTGCACCAGTTGCAACAGATCGTTGGACATCACCAGGTGATCGACAGCGTGGTGCGCATCGAGCAGGCGACGGGCGAACCCGCCAACATACTGGTGACGCAGAACCCCGACGGCACCACCTCCATAGAGACCAGCGCCGCAGACCCGCTCCTCGTCAAAGATGAGAAAAATGTCGCTAAGATTGAGTCCGCCCAATTTGCTATACCGGCGGAAATTAAAGATATTAAAGGAATCGATTTAAAGAGTGTTGGAGCTATGGGCATGGAGGGAGCGGTGGTCAAGATTTCAGCGGCAACTGAGCACGACCTGCAACATGCCATGTATAAAGTGAATGTAGAAGATCTCTCGCAACTATTGGCCTACCACGAAGTATTTGGGAAACTTAATAATGATAATCCACAACAGCCTAAGGTAATAACTGAAGTAGACGTGGAGGCCAGCACCAGCGCCGCCATGTCGGAGGCGGAGTCGTCTCCCGGACATCACTCTTGCGACATATGCGGGAAGATATTCCAATTCCGATACCAACTTATTGTTCATAGGCGCTACCACGGAGAGAGCAAACCCTTTACGTGTCAAGTATGTGGGTCCGCATTTGCTAATCCGGTGGAATTGTCAAAACACGGAAAATGTCACTTGGCCGGTGATCCCGCTGAGCGTCAAGCAAAGAGACTGGCACAAGATAAGCCCTACGCATGCTCCACTTGCCATAAGACATTCTCACGTAAGGAACACCTGGACAACCATGTACGGAGTCACACTGGGGAAACTCCTTACAGATGTCAGTTCTGCGCGAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACCGGCGAGACGCCGCACGCGCTGCGAGATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCAACCGGTGAAACTCCACATCGATGCGACTTCTGCTCTAAAACCTTCACTCGTAAAGAGCACCTGTTAAACCATGTGCGTCAGCATACAGGGGAATCACCGCATCGATGCAATTTCTGTGCGAAGTCCTTCACAAGACGAGAACATTTGGTTAATCATGTGCGACAACACACCGGTGAAACGCCTTTCCAGTGCGGATATTGCCCTAAAGCTTTTACAAGGAAAGATCATTTAGTAAATCATGTTCGTCAACATACGGGAGAGTCCCCACATAAATGTACATTCTGTACGAAATCTTTTACACGCAAAGAGCATTTAACAAATCATGTGCGACAACACACCGGGGAATCCCCTCATCGATGTACATACTGCGCCAAGTCTTTCACTAGAAAGGAACATCTTACAAATCATATAAGACAGCATACGGGCGAGACTCCCCACAAGTGCACGTACTGCCCGCGCGAGTTCTCGCGCAAGGACCACCTGCAGCAGCACGTGCGCCAGCACACGGGCGACGCGCCGCACACCTGCAGCTACTGCAGCAAGAGCTTCACCAGGAAGGAGCACCTCGTCACGCACGCCAGACAACATACTGGCGAAACTCCATTCAAATGCACGTACTGCTCGAAGTCGTTTTCGCGTAAGGAGCACCTCACGAACCACGTGCATCTTCACACTGGTGAAACACCGCACAAGTGTCCGTTCTGTACTAAGACTTTCTCTAGGAAGGAACACTTAACTAACCATGTCAGAATACACACAGGCGAATCTCCTCACAGATGCGAGTTCTGTAACAAAACATTCACAAGAAAGGAGCATTTGACCAATCACTTGAAGCAGCACACAGGTGATACGCCGCACGCGTGCAAGATATGCTCCAAACCGTTCACCAGGAAAGAACATTTAGTAACGCATATGAGATCCCACAGTTGTGGAGAGAGACCACACGTTTGCGGTGAATGTGGAAAATCCTTCCCCCTCAAGGGTAATCTGCTGTTCCACGAGCGGTCACACAATAAAGGCGCTAACGCGTCAAACAAGACGTTCCGTTGTGACGTGTGCTCCAAGGAGTTTATGTGCAAAAGTAATTTAGCATCCCATCGAAGAACCCACACAGAAACGGGCGAGGGCACTACAACTACAGAGCCCACGCCTGAAAATGAAGATTGCGGAGATTGCACCAAGTGCGATAAAGAGTCACCAGAAAGACCTGAGAGGAAACACGATACAAGAGCGTCATCAGAAAGNAGAGCTACAGAAGCAACTGCTACACAAAATCCATCGCCAAATCCAAACCCAACTGTCATGCAAATTAACAGCCAGCAAGTGCGAACGGGCGCTGCAACGACTACGAGCGTATCAACAGGCACGTTCACCCACACTGCCACCACACAGCACCACGCCTCTACCAGTATAGCCCACCATCCTGTTACTGTGAATTACTAG
Protein Sequence
MQQQLMAAARPEHANQQIQLTVSEDGIVTVVEPGGGSGKLVEKEELHETIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLLVKDEKNVAKIESAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAATEHDLQHAMYKVNVEDLSQLLAYHEVFGKLNNDNPQQPKVITEVDVEASTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHALRDLQEELHAQGALHEPRHVATGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTYCPREFSRKDHLQQHVRQHTGDAPHTCSYCSKSFTRKEHLVTHARQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCNKTFTRKEHLTNHLKQHTGDTPHACKICSKPFTRKEHLVTHMRSHSCGERPHVCGECGKSFPLKGNLLFHERSHNKGANASNKTFRCDVCSKEFMCKSNLASHRRTHTETGEGTTTTEPTPENEDCGDCTKCDKESPERPERKHDTRASSEXRATEATATQNPSPNPNPTVMQINSQQVRTGAATTTSVSTGTFTHTATTQHHASTSIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00781994; iTF_00780413;
90% Identity
-
80% Identity
-