Basic Information

Insect: Heliconius nattereri
Gene Symbol: -
Assembly: GCA_013403645.1
Location: JAAIXI010000237.1:7684859-7693410[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0031 0.21 12.2 1.0 3 23 209 230 208 230 0.96

2 22 0.03 2 9.1 0.6 1 22 604 625 604 625 0.95

3 22 1.7 1.1e+02 3.6 0.2 1 23 667 690 667 690 0.89

4 22 0.33 23 5.8 0.5 1 14 699 712 699 720 0.82

5 22 0.086 5.9 7.7 1.0 3 21 770 788 768 791 0.93

6 22 0.031 2.1 9.0 5.3 1 23 797 820 797 820 0.95

7 22 0.21 14 6.5 0.0 1 23 846 869 846 869 0.90

8 22 0.012 0.83 10.3 3.4 1 23 874 896 874 896 0.97

9 22 0.026 1.8 9.3 0.2 1 23 902 925 902 925 0.95

10 22 0.0015 0.1 13.2 1.3 1 23 937 959 937 959 0.97

11 22 0.00093 0.064 13.8 4.0 1 23 1002 1025 1002 1025 0.96

12 22 0.0033 0.22 12.1 1.7 1 23 1085 1108 1085 1108 0.96

13 22 0.00078 0.053 14.1 2.3 2 23 1131 1153 1130 1153 0.95

14 22 0.056 3.8 8.2 0.1 2 23 1159 1181 1158 1181 0.93

15 22 0.0064 0.43 11.2 0.4 1 21 1225 1245 1225 1250 0.93

16 22 0.00079 0.054 14.1 0.6 1 23 1256 1278 1256 1278 0.93

17 22 5.7e-05 0.0039 17.7 0.3 2 23 1366 1388 1366 1388 0.93

18 22 1.2e-07 7.9e-06 26.1 1.1 3 23 1395 1415 1394 1415 0.98

19 22 0.01 0.68 10.6 0.6 1 23 1432 1455 1432 1455 0.94

20 22 0.078 5.3 7.8 0.0 1 23 1478 1500 1478 1500 0.97

21 22 0.018 1.2 9.8 0.6 1 23 1506 1529 1506 1529 0.95

22 22 0.00016 0.011 16.2 0.4 1 23 1537 1560 1537 1560 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0031	0.21	12.2	1.0	3	23	209	230	208	230	0.96
2	22	0.03	2	9.1	0.6	1	22	604	625	604	625	0.95
3	22	1.7	1.1e+02	3.6	0.2	1	23	667	690	667	690	0.89
4	22	0.33	23	5.8	0.5	1	14	699	712	699	720	0.82
5	22	0.086	5.9	7.7	1.0	3	21	770	788	768	791	0.93
6	22	0.031	2.1	9.0	5.3	1	23	797	820	797	820	0.95
7	22	0.21	14	6.5	0.0	1	23	846	869	846	869	0.90
8	22	0.012	0.83	10.3	3.4	1	23	874	896	874	896	0.97
9	22	0.026	1.8	9.3	0.2	1	23	902	925	902	925	0.95
10	22	0.0015	0.1	13.2	1.3	1	23	937	959	937	959	0.97
11	22	0.00093	0.064	13.8	4.0	1	23	1002	1025	1002	1025	0.96
12	22	0.0033	0.22	12.1	1.7	1	23	1085	1108	1085	1108	0.96
13	22	0.00078	0.053	14.1	2.3	2	23	1131	1153	1130	1153	0.95
14	22	0.056	3.8	8.2	0.1	2	23	1159	1181	1158	1181	0.93
15	22	0.0064	0.43	11.2	0.4	1	21	1225	1245	1225	1250	0.93
16	22	0.00079	0.054	14.1	0.6	1	23	1256	1278	1256	1278	0.93
17	22	5.7e-05	0.0039	17.7	0.3	2	23	1366	1388	1366	1388	0.93
18	22	1.2e-07	7.9e-06	26.1	1.1	3	23	1395	1415	1394	1415	0.98
19	22	0.01	0.68	10.6	0.6	1	23	1432	1455	1432	1455	0.94
20	22	0.078	5.3	7.8	0.0	1	23	1478	1500	1478	1500	0.97
21	22	0.018	1.2	9.8	0.6	1	23	1506	1529	1506	1529	0.95
22	22	0.00016	0.011	16.2	0.4	1	23	1537	1560	1537	1560	0.96

Sequence Information

Coding Sequence: atgaATGTGAATTTTGACCGTGTTTGTAGACTGTGCTTGTCATCTCGATGCGAATTACTACCGATATTTCCTACCACCAGTTCGGATGACTCCGAACCTCCTGTCCTCGCCTCCAAAATCCAAGATTGCGTGTCTGTACAGataagCGAAAATGACGACCTGCCGACTAACGTCTGCAGGAAATGTTTGGACAATGTTAATAACTGGCATATTTTCAAGACAATATGTGAAAGGACACAAAATAGGTTACAGTCTTTCATTAATAAGGACAGCAACCTACTAGAAGAGgtcaaaataaaaaatgaaccaATGTCAGATGAAGCCTATGATGATGGAGTGGTTATTGATGGATCTTACCCTGATATTGAGaaTGCTGGAccatcaaataaaatacaacctGAAGGTCCACCCATATTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGGGCATGGAAAGCGAAAAAGAAGAGGATTATGAAGAGGAAGATGAACAAGAATTGCTAGAGCCTCGCTCTTACACAAATGTACCAAATATGCCTGAAGTATCGATCACGGTGATGCGCCCAACTGGAGAAACCTTGCATGCACGTCAAGGTATACAGCAACTTGCGTCCAAAGACTGCCTAGTCTGTGGAAGATCCTACAGGTATTCTCATAATGCAAGAAGACACGAGCTTACTGCTCATGGCTTTGATAGATACACAAATAAGGTCACAAACTTGAAATCTCGAACTCACATGCAACCTAAGTTTAGACCTAATCCATTTAATCCGAAGGCGCGCCTCATGCCAAACCCAATTAGTCATAAAATGCAATATCATCCCAAGTCCATGCCAAACAAAATGATACCGCATAAAGTTGTTGCACAACCAAAGCCAATACCTATTCGGACCGCAAAGACTcctcaaaataatttaccgTATCCTCTTAGAATAAAAGCTCTAAAAGATttgcaaataaagaaaaaagaacctcaaattttaaaaactttattgacTTCCAAACCTGAGGTGTTAGTTTCTGAAccggaaataataaattcggGCCCAGAGAGTCCTGAAACATTGATTTCGGAACCCGAAATTGCGTCTTTCCAAGTAGAAGCAATTCTGTCGGAACCGGATACGTTTGTTAATACACATCCGGATGatgaagatgaaaataatcaGGGGCAGAATTATGACACTGTTGACATGGATTCAGATAACGAAATTGAAATTGCACGCCAAGAAGAAAATGAGAGAAATGCAGAAGGGGAGGAAAATTGTGTGGAAATCGATGGCGATGATAATACACAAGACGAGAATAATCTACAAGAAAATCATGACGATACTGAGAAAGATCATCACAATGACAATGTTGAAAGTCAAGATATTGATACGGAGAACAATGTTGATGGAGATGGGAATTACAATGACGCCAAAGAAAATGAGTATGAGAATAACGAAAAGGAGGGAGAAGCAATCAATCATGAAGAAAATGACGACGATGATGATCTACCTCCTATGAATATTGCGCCTGTCGTCGAAATAAATGAGATGCAAACAAATTCCTATAATAGTGATGGAAATGAGGAAGAGTTGGACGAAACGGTTGACCCCAATGATACCGTCGATAGAGACGATACAAAAGATCTCGACCCCAATAAAGTTTACGTAACGAAAACACAACGAGATTTTATACTCAAATATAGAGATATtatagaacaaataaatactaaacgTTGCTTATGTTGTAACAAAGAGCATCCCCGCAGAAAAGCGGTTATtcaacatttacaaaaaaatggcCATAAGGTTCCTAAACATACATGCTATAATTGCGTTGTCACATTCACTCATATAGGAGCCTTATTAAGCCATATGCGATCAAATACGTGTACAGATCTATGGAAAATTATCTACAACGAAAATGGGATAACTGATGATATAGTACTGGAAGACGAACCCAAGGACACAAAAGTTCAGTACAAGGACATCTTGAATGCGAGATCATATGCATGCAAGTTGTGTCCGgccaaatttcaattaaaacaatttattatgaaacataTTCTTGATGTACATGAGGATGGACAATCTCGCGTTCCTCATTCATGCGTGCATTGCGGTTTGCGTTTCAAAGATAAAGCTATAGGAAAAAGACACATTCGTAATGGAGAATGtactgtttatatttcttgtgATTTATGTTCCGAAAAGTTTTTGAATTTACAAGATTTCAATGATCATGCCGTAGCAGAGCACGCGGGTAGTTTTGATCCTGATAGTCAGAGCAAGTGCGTCGACGGCCGTCCCACAGACTGCCCCATATGTGGAAAGAAGAACAGCAGTTACCCTAATTTGGTGAAACATTTGAAGTGTATACACAATGAGGAGAAACCTCATCATTGTCAACATTGCGACTCCAAATTCGAGCAAACTGCTGACCTTAACAAGCACATCTATATGGAACACTCTGATAGGACGCTGGGCATGCAGTCTTCCGAGCCCGATATGACTCTCGTGAAAGAAGAAGCAGAAGAGTACCACTACTCGTGTACAGAATGCAACTCTATTTTTGAAACCGTAGATGCATGGACAGACCACCAGGTCGCTGAACATAATCAAGTAGCTCACCATTGTGATCAATGCGAGAAGAAATTTTTACGCCCGTCAGAACTTGCGGAGCATAAGAACACCCATTTAAGAGTTAAATTCTATCCTTGTAGTATTTGTACGAATTCTTACAGCACACCATTAAAATTATCTGAACATGTACAGCAAGTCCATCCTGGAGCAGGTAAGACGCCGGGAGACACGGAATTCTTTTGTGACATTTGTATAAGATCATTCAAAAGCCGCCAAGCTTATTCTAATCATATGCGTATTCATGCGAAAGTGCCTACCACTAATAGAAAACCTGGAGAAAATAAAGGTTTTGCGCCCCAAATTATAGGGAAACCAATACGCCAGTTTTCTATGCAACCAGGTTTTAGTCCATATGTTCCAAATGCTCCTTATTGCTGTGATATTTGTGGAAAAGGATTTATGCACAAAAAGAATATATGGAAACATAAGAAGGTGCTACATGCTGATCTTCTTGCGGATAGAAACGACAGCGAGGAGAACACAATGCAAGCGTCTACTGAAGaagatgaatataatatagatgaaAATGGCGCTATTTTGTCTACTCCGCAATTTAACAGtttcaattttacaaatttgtcAAATAATATGCAACAGACATCTCAAGATGCTTTACCATACTCTTGTGAGTTATGCTACAAGAAGTTCCCTCTAAGAACCAGTCTTTGGAAACACAAACGGGCAAAGCACGGAATTAATGCGAGTGCTGGTACAACGGAAACTCAAACACAACCATCCAATGAAGGCACGAGGTCTAGCTGcactatatgtaaaataaccttcacagacaaaaaatcttactaccgtcatagaaaaaatgttCACAAATCATCAGTACAGATGTGCAAAATATGTGGAAAGCCACTGAATTCGACATTAGAACTTTATGAACATCTGAAGGCGGCGCACGCTCGGGAACTACTAGGTTATAATTCAAACCAGAGTTCAAATAAATCCCAAGACGTAAGTCAAGACATGGACGGGGAGGACGACGGAGATCAAGACTCTGTCGATCCCAGCATTGACTACCAAGCACGATACCCCTGCGACACTTGTGGAAAACAGTTTGTGGGACTGTTAGCTTTACAGAACCATCAGTGTATCAATCAGATTCACAGTCAACCACAAACATTTGATTGTGAAATATGCCACAAGAGCTACACTTCCATTGCGGCCCTGAAAAGTCACCGCGGCTGGCACTTGCGATCTCCTGACGGCAAGGCCGCTGCTAACAACTCGGGGCTTTGGATGCCTCAAAACAAAGTAACCAGCAAAGTCAGCAAACACGAAGTCGTAGATATTGTTCAAAACACTCGCTCCTCGACATCAGCAAACTTAGCCAAGAGACGGTTACCTCCCGAAGTGGAAGTGACCGTAGTCAACCCTAATAAGAAATTACGATCTGACGATTCCATAGACTTGGatcatcaaaataattattctggAGGGCCAGAAGACAGGTACTGCAATATTTGTGACAAGGAGTTCACCAAGCGAGCTGCATACCAGCGCCACATGGACGAGGTGCACCAGCCGAACTCTGTATTCTGTCCAGTTTGCGACAAGTCGTTTACACGAAAATCCACCTTAATTGTACATATGAAGAAACATTACGAGGGCGGCGAGGGCAGCTCCGGCACACAAATAGATGAGGACGTCCACGCGTGTGAAGTGTGCGGCGCGCAGTTCGACACCGTGAAGGATTTGAACACCCACCACGCGATGGAGCACGGGGACGAGGGGGACGACACGGGGGAGTCCGAGGACGACGGAGGAGCTGTGGCACCACCTGGAGAGTTCACTTGCGGCCAGTGCGGGGATGGGGTGGCGACCCCTCGCGACCTGATAGCTCACCGGACAATGCACTCGACTCCCACCAAGTTTTTCTGCAACATATGCAAGGTTTACTTCGCGAGAGCCCTCGACCTGTCGTCGCACACGCGGGCGAGGCACTCTGATAACGAAAAAGTGTTTTTCCCTTGCGCCATGTGCGACCGGttttatatgaacaaaaagagTTTACAGAGACACATCGAGATGGCCCACTGA
Protein Sequence: MNVNFDRVCRLCLSSRCELLPIFPTTSSDDSEPPVLASKIQDCVSVQISENDDLPTNVCRKCLDNVNNWHIFKTICERTQNRLQSFINKDSNLLEEVKIKNEPMSDEAYDDGVVIDGSYPDIENAGPSNKIQPEGPPILASLGLTPRSDKGMESEKEEDYEEEDEQELLEPRSYTNVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHGFDRYTNKVTNLKSRTHMQPKFRPNPFNPKARLMPNPISHKMQYHPKSMPNKMIPHKVVAQPKPIPIRTAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDTFVNTHPDDEDENNQGQNYDTVDMDSDNEIEIARQEENERNAEGEENCVEIDGDDNTQDENNLQENHDDTEKDHHNDNVESQDIDTENNVDGDGNYNDAKENEYENNEKEGEAINHEENDDDDDLPPMNIAPVVEINEMQTNSYNSDGNEEELDETVDPNDTVDRDDTKDLDPNKVYVTKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDTKVQYKDILNARSYACKLCPAKFQLKQFIMKHILDVHEDGQSRVPHSCVHCGLRFKDKAIGKRHIRNGECTVYISCDLCSEKFLNLQDFNDHAVAEHAGSFDPDSQSKCVDGRPTDCPICGKKNSSYPNLVKHLKCIHNEEKPHHCQHCDSKFEQTADLNKHIYMEHSDRTLGMQSSEPDMTLVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPLKLSEHVQQVHPGAGKTPGDTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGENKGFAPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDEYNIDENGAILSTPQFNSFNFTNLSNNMQQTSQDALPYSCELCYKKFPLRTSLWKHKRAKHGINASAGTTETQTQPSNEGTRSSCTICKITFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQSSNKSQDVSQDMDGEDDGDQDSVDPSIDYQARYPCDTCGKQFVGLLALQNHQCINQIHSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVDIVQNTRSSTSANLAKRRLPPEVEVTVVNPNKKLRSDDSIDLDHQNNYSGGPEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQIDEDVHACEVCGAQFDTVKDLNTHHAMEHGDEGDDTGESEDDGGAVAPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897124;
90% Identity: iTF_00775435;
80% Identity: -