Hnat015075.1
Basic Information
- Insect
- Heliconius nattereri
- Gene Symbol
- -
- Assembly
- GCA_013403645.1
- Location
- JAAIXI010000232.1:455055-460562[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-11 3e-08 33.3 0.0 4 39 167 203 166 207 0.90 2 4 7e-12 1.7e-08 34.1 0.2 2 39 219 256 218 259 0.92 3 4 1.5e-16 3.6e-13 49.1 0.0 2 45 274 318 273 318 0.96 4 4 4.1e-18 9.7e-15 54.1 0.0 1 38 325 363 325 367 0.94
Sequence Information
- Coding Sequence
- ATGACTGGGACGGAAACATTCCAAGTGAAATGCGAGCCGCTATCCGATGAAGAAGAGACAAGTTCACAGTTCaccaaaacttattttaataagCTTTCAAACGAATACGTCCCCATCAAATTGGAGCACATTTCGCAAGCTGACGAAAATGTTCCATCGAACCTTCTACATCATTTGcagCATGGGTTGGAGGAGCTCGCGCCCGCGCCCGCCGGCCCCGCCGCCACGCCCGTGCGGGACCAGCTGGCCGCGCCTTATGACACTTCTCTTGCTACTCTCGAGCCAGCGTCGGATCCTCAGATGGGGACGTCCCTTATTACTAGGCATATGGAAATGATGAATGAAGCGGCGGACTCGTCGGAGTTCGTACCGCTGATGATCAAAGACGAGCCGAGTTCAGAAGGCGAACAACCACATCTAAGCAGTGACGACACAGACTCAAACGGACCGACACAAGAAACGTTCAGCCGGTCGAGTCCCAAAAGCTGGACTCAACTAGACATGGAGAAAGCTCTGGAAGCTTTGAGAAAACATCACATGAGTTTGACTAAGGCATCAGCAACCTACGGTATCCCATCAACTACCCTGTGGCAAAGGGCACACAGGCTCGGTATAGATACTCCCAAAAAGGAAGGTGCTTCGAAGTCGTGGAGCGAAGCGGACTTAAAAGGAGCTTTACATGCTTTACGAGCCGGCGCCATATCTGCTAATAAGGCTAGCAAAGCTTATGGTATACCATCCAGCACTCTGTACAAGATAGCGCGGCGCGAGGGCATCCGCCTGGCCGCGccgttcaacgccgcgcccaCCGCCTGGCGCCGCGCCGACCTCGAGCGCGCGCTGCTCGCCATCCGCACCGGCGACGTGTCCGTGCAGCGCGCCGCGCACCTCTACGGCATACCTACCGGTACTTTATACGGGAGGTGTAAACGGGAGGGTATAGAGCTGTCCCGCTCTAATCCCACGCCGTGGTCGGAGGACGCCATGGAGGAGGCACTCGAGGCTGTCAGAATTGGTCAAATGTCGATAAATCAAGCGgccattcattataatttgcCATATTCGTCGTTGTATGGTCGATTCAAGAGATGCAAATTTCAACCTGTTCAgaacCCGCCACCGACCACAACAGACGCTGAGCCCCGTGACGCCTCAGAGCCTGTTGACCCCAGCGACCCGATTGACCCCTACCCCCAGTATGGCGTCGTGAACCCTCACGCGCAAACACAGGTCACTAATGTGTACCCACACGCGCATGTCTCTTATGAAACCTACCCATACGCAATGTATTACACGCAGTGTGACGTCACTAGCTGA
- Protein Sequence
- MTGTETFQVKCEPLSDEEETSSQFTKTYFNKLSNEYVPIKLEHISQADENVPSNLLHHLQHGLEELAPAPAGPAATPVRDQLAAPYDTSLATLEPASDPQMGTSLITRHMEMMNEAADSSEFVPLMIKDEPSSEGEQPHLSSDDTDSNGPTQETFSRSSPKSWTQLDMEKALEALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALLAIRTGDVSVQRAAHLYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKFQPVQNPPPTTTDAEPRDASEPVDPSDPIDPYPQYGVVNPHAQTQVTNVYPHAHVSYETYPYAMYYTQCDVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00159746;
- 90% Identity
- iTF_00774429;
- 80% Identity
- -