Hmel010197.1
Basic Information
- Insect
- Heliconius melpomene
- Gene Symbol
- -
- Assembly
- None
- Location
- Hmel207001o:13860787-13866702[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 2.8e-08 33.5 0.0 4 39 138 174 137 178 0.90 2 4 8e-12 1.5e-08 34.3 0.2 2 39 190 227 189 230 0.92 3 4 5.4e-16 1.1e-12 47.6 0.0 2 45 245 289 244 289 0.96 4 4 2.3e-18 4.4e-15 55.2 0.0 1 38 296 334 296 338 0.94
Sequence Information
- Coding Sequence
- ATGACTGGGACGGAAACATTCCGAGTGAAATGCGAGCCGCTATCCGATGAAGAAGAGACAAGTTCACAGTTCACCAAAACTTATTTTAATAAGCATGGATTGGAGGAGCTCGCGCCCGCGCCCGCCGGCCCCGCCGCCACGCCCGTGCGGGACCAGCTGGCCGCGCCTTACGACACTTCTCTTGCTACTCTCGAGCCAGCGTCGGATACTCAGGTGGGGACGTCCCTCATTACTAGGCATATGGAAATGATAAATGAAGCGGCGGACTCGTCGGAGTTCGTACCACTGATGATCAAAGACGAGCCGACTTCAGAAGGCGAACAACCACATCTAAGCAGTGATGACACAGACTCAAACGGACCGACACAAGAAACGTTCAGCCGATCGAGTCCTAAGAGCTGGACTCAACTAGACATGGAGAAAGCTCTGGAAGCTCTGAGAAAACATCACATGAGTTTGACTAAGGCATCAGCAACCTACGGTATCCCATCAACTACCCTATGGCAAAGGGCACACAGGCTCGGTATAGATACTCCCAAAAAGGAAGGGGCTTCGAAGTCGTGGAGCGAAGCGGATTTAAAAGGAGCTTTACACGCTTTACGAGCCGGCGCTATATCTGCTAATAAGGCTAGCAAGGCTTATGGTATACCATCCAGCACTCTGTACAAGATAGCGCGGCGCGAAGGCATCCGCCTGGCCGCGCCGTTCAACGCCGCGCCCACCGCCTGGCGCCGCGCCGACCTCGAGCGCGCGCTGCTCGCCATCCGCGCCGGCGACGTGTCCGTGCAGCGCGCCGCGCACCTCTACGGCATACCTACCGGTACTCTATACGGAAGGTGTAAACGGGAGGGTATAGAGCTGTCCCGCTCTAATCCCACGCCGTGGTCGGAGGACGCCATGGAGGAGGCACTCGAGGCTGTCAGAATGGGTCAAATGTCGATAAATCAAGCGGCCATTCATTATAATTTGCCATACTCGTCGTTGTATGGTCGATTCAAGAGATGCAAATTTCAACCTGTTCAGAACCCGCCACTGATCACAACAGACGCTGAGCCCCGTGACGCCTCAGAGCCTGTTGACACCAGCGACCCGATTGACCCCTACCCCCAGTATGGCGTCGTGAACCCTCACGCGCAAACACAGGTCACTAATGTGTACCCACACGCGCATGTCTCTTATGAAACCTACCCATACGCAATGTATTACACGCAGTGTGACGTCACTAGCTGA
- Protein Sequence
- MTGTETFRVKCEPLSDEEETSSQFTKTYFNKHGLEELAPAPAGPAATPVRDQLAAPYDTSLATLEPASDTQVGTSLITRHMEMINEAADSSEFVPLMIKDEPTSEGEQPHLSSDDTDSNGPTQETFSRSSPKSWTQLDMEKALEALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALLAIRAGDVSVQRAAHLYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRMGQMSINQAAIHYNLPYSSLYGRFKRCKFQPVQNPPLITTDAEPRDASEPVDTSDPIDPYPQYGVVNPHAQTQVTNVYPHAHVSYETYPYAMYYTQCDVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00159746;
- 90% Identity
- iTF_00247098;
- 80% Identity
- -