Basic Information

Insect: Heliconius hermathena
Gene Symbol: -
Assembly: GCA_013403705.1
Location: JAAIXJ010000093.1:304724-309004[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0028 0.2 12.4 1.0 3 23 58 79 57 79 0.96

2 23 0.027 1.9 9.3 0.6 1 22 453 474 453 474 0.95

3 23 4 2.8e+02 2.5 0.3 1 22 516 537 516 539 0.82

4 23 0.31 22 6.0 0.5 1 14 548 561 548 569 0.82

5 23 9.1 6.4e+02 1.3 0.1 2 22 577 597 576 599 0.84

6 23 0.18 13 6.7 1.1 3 21 619 637 617 640 0.93

7 23 0.029 2 9.2 5.3 1 23 646 669 646 669 0.95

8 23 0.19 13 6.6 0.0 1 23 695 718 695 718 0.90

9 23 0.011 0.78 10.5 3.4 1 23 723 745 723 745 0.97

10 23 0.024 1.7 9.5 0.2 1 23 751 774 751 774 0.95

11 23 0.0014 0.096 13.4 1.3 1 23 786 808 786 808 0.97

12 23 0.00085 0.06 14.0 4.0 1 23 851 874 851 874 0.96

13 23 0.003 0.21 12.3 1.7 1 23 934 957 934 957 0.96

14 23 0.00071 0.05 14.2 2.3 2 23 980 1002 979 1002 0.95

15 23 0.051 3.6 8.4 0.1 2 23 1008 1030 1007 1030 0.93

16 23 0.0058 0.41 11.4 0.2 1 21 1074 1094 1074 1095 0.95

17 23 0.00073 0.051 14.2 0.6 1 23 1105 1127 1105 1127 0.93

18 23 5.2e-05 0.0037 17.8 0.3 2 23 1215 1237 1215 1237 0.93

19 23 1.1e-07 7.4e-06 26.3 1.1 3 23 1244 1264 1243 1264 0.98

20 23 0.0091 0.64 10.8 0.6 1 23 1281 1304 1281 1304 0.94

21 23 0.071 5 8.0 0.0 1 23 1327 1349 1327 1349 0.97

22 23 0.016 1.1 10.0 0.6 1 23 1355 1378 1355 1378 0.95

23 23 0.00015 0.011 16.4 0.4 1 23 1386 1409 1386 1409 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0028	0.2	12.4	1.0	3	23	58	79	57	79	0.96
2	23	0.027	1.9	9.3	0.6	1	22	453	474	453	474	0.95
3	23	4	2.8e+02	2.5	0.3	1	22	516	537	516	539	0.82
4	23	0.31	22	6.0	0.5	1	14	548	561	548	569	0.82
5	23	9.1	6.4e+02	1.3	0.1	2	22	577	597	576	599	0.84
6	23	0.18	13	6.7	1.1	3	21	619	637	617	640	0.93
7	23	0.029	2	9.2	5.3	1	23	646	669	646	669	0.95
8	23	0.19	13	6.6	0.0	1	23	695	718	695	718	0.90
9	23	0.011	0.78	10.5	3.4	1	23	723	745	723	745	0.97
10	23	0.024	1.7	9.5	0.2	1	23	751	774	751	774	0.95
11	23	0.0014	0.096	13.4	1.3	1	23	786	808	786	808	0.97
12	23	0.00085	0.06	14.0	4.0	1	23	851	874	851	874	0.96
13	23	0.003	0.21	12.3	1.7	1	23	934	957	934	957	0.96
14	23	0.00071	0.05	14.2	2.3	2	23	980	1002	979	1002	0.95
15	23	0.051	3.6	8.4	0.1	2	23	1008	1030	1007	1030	0.93
16	23	0.0058	0.41	11.4	0.2	1	21	1074	1094	1074	1095	0.95
17	23	0.00073	0.051	14.2	0.6	1	23	1105	1127	1105	1127	0.93
18	23	5.2e-05	0.0037	17.8	0.3	2	23	1215	1237	1215	1237	0.93
19	23	1.1e-07	7.4e-06	26.3	1.1	3	23	1244	1264	1243	1264	0.98
20	23	0.0091	0.64	10.8	0.6	1	23	1281	1304	1281	1304	0.94
21	23	0.071	5	8.0	0.0	1	23	1327	1349	1327	1349	0.97
22	23	0.016	1.1	10.0	0.6	1	23	1355	1378	1355	1378	0.95
23	23	0.00015	0.011	16.4	0.4	1	23	1386	1409	1386	1409	0.96

Sequence Information

Coding Sequence: ATGGAAAGTGAAAAAGAAGAGGATTATGAAGAGGAAGATGAACAAGAATTGCTAGAGCCTCGCTCTTACACAAATGTACCAAATATGCCTGAAGTATCGATCACAGTGATGCGCCCAACTGGAGAAACCTTGCATGCACGTCAAGGTATACAGCAGCTTGCGTCTAAAGACTGTCTAGTCTGTGGAAGATCCTACAGATATTCCCATAATGCAAGAAGACACGAGCTTACTGCTCATGGCTTTGATAGATACACAAACAAGGTCACAAACTTGAAATCTCGAGCTCACATGCAACCTAAGTTTAGACCTAACCCATTCAATCCGAAGGCGCGCCTCATGCCAAACCCAATTAGTCATAAAATGCAGTATCATCCCAAATCCATGCCAAACAAAATGATACCGCATAAAGTTGTTGCACAACCAAAGCCTATACCTATTCGGACAGCAAAGACTCCTCAAAATAATTTACCATACCCTCTTAGAATAAAAGCTCTAAAAGATttgcaaataaagaaaaaagaacctcaaattttaaaaactttattgaCATCCAAACCTGAGGTGTTAGTTTCTGAACCCGAAATAATAAATTCGGGCCCAGAAAGTCCCGAAACATTGATTTCGGAACCCGAAATTGCTTCTTTCCAAGTAGAAACAATTCTGTCGGAGCCGGATACGTTTGTTAATACACATCCGGATGATGAAGATGAAAATAACCAAGGGCAGAATTATGACACTGTTGACATGGATTCAGACAACGAAATTGAAATTGCACGCCAGGAAGAAAATGAGAGACATGTAGAAGGGGAGGAAAATTGTGTGGAAATCGATGGCGATGATACACAAGACGAGAATAATTTACAAGAAAATCATGACGATATTGGAAACGATCATCACAATGACAATGTTGAAAGTCAAGATGTTGATACGGACAACAATGTTGACGGAAATGAGAATTACAATGACGCCAAAGAAAATGAGTATGAGAGTAATGACAAGGAAGGTGAAGCAATGAATCACGAAGAAAATGACGACGATGATGATCTACCTCCTATGAGTATTGCGCCTGTCGTCGAAATAAATGAAGAAATGCAAACAAATTCCTATAATAGTGATGGAAATGAGGAAGAGTTGGACGAAACGGTTGACCCCAATGATACCGTTGACGGAGACGATATAAAAGACCTTGATCCTAATAAAGTTTATGTTACGAAAACACAACGAGATTTTATACTCaaatatagagatattataGAACAAATCAATACTAAACGTTGTTTATGTTGTAATAAAGAGCATCCCCGCAGAAAAGCGGTCATTCAGCACTTGCAAAAGAATGGCCATAAAGTTCCTAAACATACATGCTACAATTGCGTTGTCACATTTACTCATATAGGAGCCTTATTAAGCCATATGCGATCAAACACGTGTACAGATCTatggaaaattatttacaaCGAAAATGGGATAACTGATGATATAGTACTGGAGGATGAACCCAAGGACTCGAAAGTTCAGTACAAGGACATCTTGAATGCGAGATCATATGCATGCAAGTTGTGTCCGgccaaatttcaattaaaacaatttattatgaaacatGTTCTAGATGTACATGAGGATGGACAATCTCGCGTTCCTCATTCATGCGTGCACTGCGGTTTGCGTTTCAAAGATAAAGCTATAGGAAAGAGACACATTCGTAATGGAGAATGTACTGTTTATATTTCTTGTGATTTATGTTCTGAAAAGTTTTTGAATTTACAAGATTTCAATGATCATGCCATAGCGGTGCACGCGGGTAGTTTTGATCCCGACAGTCAGAGCAAGTGCGTCGACGGGCGTCCCACAGACTGTCCCATATGTGGAAAGAAGAACAACAGTTACCCTAATTTGGTGAAACATTTGAAGTGTATACACAACGAGGAGAAACCTCATCATTGTCAACATTGTGATTCCAAATTTGAGCAAACTGCTGATCTTAACAAGCACATCTATATGGAACACTCTGATAGGACGCTTGGCATGCAGACTTCTGAGCCTGATATGACTCTCGTGAAAGAAGAAGCAGAAGAGTACCACTACTCGTGTACAGAATGCAATTCTATTTTTGAAACCGTCGATGCATGGACAGATCATCAGGTTGCTGAACACAATCAAGTGGCTCATCATTGTGATCAATGTGAGAAGAAATTTTTACGCCCGTCAGAACTTGCGGAGCATAAGAACACGCATTTAAGAGTTAAATTCTATCCTTGTAGTATTTGTACTAATTCTTACAGCACACCTCTAAAATTATCTGAACATGTACAGCAGGTTCACCCCGGAGCAGGGAAGACACCAGGAGACACGGAATTCTTTTGTGACATTTGTATAAGATCATTCAAAAGCCGCCAAGCTTATTCTAATCATATGCGTATTCATGCGAAAGTGCCTACCACTAATAGAAAACCTGGAGAAAATAAAGGTTTTGCGCCACAAATTATAGGGAAGCCAATACGCCAGTTCTCTATGCAACCAGGTTTTAGTCCATACGTTCCAAATGCTCCTTATTGCTGTGATATTTGTGGAAAAGGATTTATgcataaaaagaatatatggaAACATAAAAAGGTGCTACATGCCGATCTACTCGCTGATAGAAACGACAGCGAGGAGAACACAATGCAAGCATCTACTGAAGAAGATGAATACAATATTGATGAAAATGGCGCTATTTTGTCAACTCCGcaatttaacagttttaattttactaatttgTCGAATAATATGCAACAAACATCTCAAGATGCTTTACCATACTCTTGTGAATTATGCTACAAGAAGTTCCCTCTACGAACAAGTCTTTGGAAGCACAAACGGGCAAAGCATGGAATTAATGCAAGTGCCGGTACATCGGAAACTCAAACACAACCTTCCAACGAAGGCACGAGATCTAGCTGCACTATATGTAAAATAACCTTCACAGACAAAAAATCTTACTACCGTCATAGAAAAAATGTTCACAAATCATCAGTACAGATGTGCAAAATATGTGGAAAACCACTTAATTCGACATTAGAACTTTATGAACATCTGAAGGCGGCGCACGCTCGGGAACTACTAGGGTATAATTCAAACCAGAGTTCAAGTAAATCACAAGACGTAAGTCAAGACATGGACGTGGAGGACGACGGAGATCACGACTCTGTCGATCCCAGCATTGACTACCAGGCACGATACCCCTGCGACACTTGTGGGAAACAGTTTGTGGGACTGTTAGCTTTACAGAACCATCAATGTATCAATCAGATACAAAGCCAACCACAAACATTTGATTGTGAAATATGTCACAAGAGCTACACTTCCATTGCGGCCCTGAAAAGTCACCGCGGCTGGCACTTGCGATCTCCCGATGGCAAGGCCGCTGCTAACAATTCGGGGCTTTGGATGCCTCAAAACAAAGTAACCAGCAAAGTCAGCAAACACGAAGTGGTAGACATTCCTCAAAATACTCGCTCATCGACCTCAGCAAACTTAGCCAAGAGACGGTTACCGCCCGAAGTGGAAGTGACCGTAGTGAACCCGAATAAGAAATTACGATCTGACGATTCCATAGACTTGGATCATCAAAACAATTTTTCTGGAGGCCCAGAAGATAGGTACTGTAATATTTGTGACAAGGAGTTCACCAAGCGAGCCGCATACCAGCGCCACATGGACGAGGTGCACCAACCGAATTCTGTATTCTGTCCAGTTTGCGACAAGTCGTTTACACGAAAGTCCACCTTAATTGTACATATGAAGAAACATTACGAGGGCGGAGAGGGCAGCTCCGGCACGCAAATAGACGAGGACGTCCACGCGTGTGAAGTGTGCGGCGCGCAGTTCGACACCGTGAAGGATTTGAACACCCACCACGCGATGGAGCATGGAGACGAAGTGGACGACACGGGCGAATCTGACGACGACGGAGGAGCTGTGGCACCACCAGGGGAGTTCACTTGCGGCCAGTGCGGGGACGGAGTGGCGACTCCTCGCGACCTGATAGCTCACCGGACAATGCACTCTACTCCCACTAAGTTCTTCTGCAACATATGCAAGGTCTACTTCGCGAGAGCCCTCGACCTGTCCTCGCACACGCGGGCGAGGCACTCCGACAACGAAAAAGTGTTCTTCCCTTGCGCCATGTGCGACCGGTTTTATATGAACAAAAAGAGTTTACAGAGACACATCGAGATGGCCCACTGA
Protein Sequence: MESEKEEDYEEEDEQELLEPRSYTNVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHGFDRYTNKVTNLKSRAHMQPKFRPNPFNPKARLMPNPISHKMQYHPKSMPNKMIPHKVVAQPKPIPIRTAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDTFVNTHPDDEDENNQGQNYDTVDMDSDNEIEIARQEENERHVEGEENCVEIDGDDTQDENNLQENHDDIGNDHHNDNVESQDVDTDNNVDGNENYNDAKENEYESNDKEGEAMNHEENDDDDDLPPMSIAPVVEINEEMQTNSYNSDGNEEELDETVDPNDTVDGDDIKDLDPNKVYVTKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDSKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPHSCVHCGLRFKDKAIGKRHIRNGECTVYISCDLCSEKFLNLQDFNDHAIAVHAGSFDPDSQSKCVDGRPTDCPICGKKNNSYPNLVKHLKCIHNEEKPHHCQHCDSKFEQTADLNKHIYMEHSDRTLGMQTSEPDMTLVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPLKLSEHVQQVHPGAGKTPGDTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGENKGFAPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDEYNIDENGAILSTPQFNSFNFTNLSNNMQQTSQDALPYSCELCYKKFPLRTSLWKHKRAKHGINASAGTSETQTQPSNEGTRSSCTICKITFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQSSSKSQDVSQDMDVEDDGDHDSVDPSIDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVDIPQNTRSSTSANLAKRRLPPEVEVTVVNPNKKLRSDDSIDLDHQNNFSGGPEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQIDEDVHACEVCGAQFDTVKDLNTHHAMEHGDEVDDTGESDDDGGAVAPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897124;
90% Identity: iTF_00775435;
80% Identity: -