Hera013231.1
Basic Information
- Insect
- Heliconius erato
- Gene Symbol
- bab1
- Assembly
- None
- Location
- Hel:4151606-4153722[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-18 7.5e-15 54.1 0.0 1 43 28 71 28 73 0.95 2 3 1.7 2.7e+03 -2.1 0.0 12 22 140 150 138 150 0.67 3 3 1.4 2.2e+03 -1.9 1.6 6 15 170 179 166 181 0.83
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAATACCAACCAGAGTCTAGTGCACAACCTGCGGTTCCGCGAGCGCGGCCCTCTCAAATCCTGGCGTCCCGAAACCATGGCCGAGGCTATATTCTCCGTTCTTAAAGAGGGGCTCTCTCTCTCCCAGGCTGCCAGAAAATACGACATACCGTATCCGACGTTCGTGCTGTACGCTAACAGAGTCCACAACATGCTGGGTCCCAGCAGCGACGGTGGAGCAGATTTGAGACCAAAAGGTCGTGGACGACCGCAACGCATCCTCCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTCATCCGCGCCGTCGTCTTCCGCGACTCGCACACGCCGCACGCCGCCCACCACATCAAGGAGGAGGTGCTCCCCGTCTATCCTCCCATCACGTGTGGCGAACGCGTGTTGCAGGACGGCATGAGCGTGCAGAACGCATATCCCGTGGGGTGCGGCAACGGGCGCGAGGGCGGGGTGTCGCCCAACGCCGCCGCCGCTGCCGCCGTGGCCGCCGTCGCGCACGGCTTGCGCCGCCAGATGTGCAACATGGTGGTGGCCGCGCAGCGCCCGCCCGACCACCCGCCACACCTGGGCCTGCCGCCGCTGCCACTGCAGTCGCCGCGCCTGCCCTCCCCGCTCTCTGCCGGCCTGGAGTCCCCGCTGTGCTCGCCGCCGCCGCCGGGCCACGCCCTCGAGCCGCCCAAGCCCGCTGACCCCTTCCGACCTTTCGCTTCGCCTCGACCGGACAGTCGTTACGGAGAACGTGATGTCGTTTCCGAGATGACCGAAATGGGCCCGCCTAAGACACCGGTATCGATCGCCAAGAACGGCAAGGACCTGACGACTCCGCTGCCACTGCCGCTGCCGGTGAAGATGGAGCTGCCGCCGGCAGAGGCTCGCGCTGAGAACATTTGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSSDGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHTPHAAHHIKEEVLPVYPPITCGERVLQDGMSVQNAYPVGCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYGERDVVSEMTEMGPPKTPVSIAKNGKDLTTPLPLPLPVKMELPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079819;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -