Basic Information

Insect: Heliconius erato
Gene Symbol: -
Assembly: None
Location: Hel:2956223-2978778[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.6e-11 2.5e-08 33.1 0.0 4 39 215 251 214 255 0.90

2 4 9e-12 1.4e-08 34.0 0.2 2 39 267 304 266 307 0.92

3 4 5.6e-16 8.9e-13 47.4 0.0 2 45 322 366 321 366 0.96

4 4 5.2e-18 8.3e-15 53.9 0.0 1 38 373 411 373 415 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.6e-11	2.5e-08	33.1	0.0	4	39	215	251	214	255	0.90
2	4	9e-12	1.4e-08	34.0	0.2	2	39	267	304	266	307	0.92
3	4	5.6e-16	8.9e-13	47.4	0.0	2	45	322	366	321	366	0.96
4	4	5.2e-18	8.3e-15	53.9	0.0	1	38	373	411	373	415	0.94

Sequence Information

Coding Sequence: ATGCGCCACGCAGCGGCGCGCGGGGGGTGCGGGGGGAGCGGGGGTGGCGGGCCACTGCCGGATTCACTTTCATTTGCGACATCCCAGCCTCCCCCGAAGGTCACGGTGCAGGCGAGCGCCCCGTGGCCTGCCGCCGACCAGGAAATGACTGGGACGGAAACATTCCGAGTGAAATGCGAGCCACTGTCCGACGAAGAAGAGACAAGTTCACAGTTCACCAAAAGTTATTTTAATAAGCTTTCAACTGAATACGCCCCGATCAAATTGGAGCATATCTCGCAAGCTGACGAAAATGTTTCATCGAACCTTCTACACCATTTGCAGCACGGGCTGGAGGAGCTGGCGCCCGCGCCCGCCGGCCCCGCCGCCACGCCCGTGCGCGAGCAGCTGTGCGCGCCGCGCCACGCCGCGCTCGCCACGCTCGAGCCCGCGGCGGACCACCACGCGGGGTCTTCCCTTATTAGTAGACATATGGAAATGATGAATGAAGTGGCGGACTCGTCGGAGTTCGTACCGCTGATGATCAAAGACGAGCCGAGTTCTGAAGGCGAACAACCACATATAAGCAGTGATGACACAGACTCAAACGGACCAACACAAGAAACGTTCAGCCGATCGAGCCCNAAAAGCTGGACTCAACTAGACATGGAGAAAGCTCTGGAAGCTTTGAGAAAACATCACATGAGTTTGACTAAGGCATCAGCAACCTACGGTATCCCATCTACTACCCTGTGGCAAAGGGCGCACAGGCTCGGTATAGATACTCCCAAAAAGGAAGGGGCTTCGAAGTCGTGGAGCGAAGCGGACTTAAAGGGAGCTTTACACGCTTTACGAGCCGGTGCCATATCTGCTAATAAAGCCAGCAAGGCTTATGGCATCCCGTCCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGCCTGGCCGCGCCCTTCAACGCCGCGCCCACCGCCTGGCGCCGCGCCGACCTCGAGCGCGCGCTGCTCGCCATCCGCGCCGGCCACGTGTCCGTGCAGCGCGCCGCGCACCTCTACGGCATACCCACCGGTACTCTATACGGAAGGTGTAAGCGGGAAGGTATAGAGCTGTCCCGCTCTAACCCCACGCCGTGGTCGGAGGACGCCATGGAGGAGGCTCTCGAGGCGGTCAGAATTGGTCAAATGTCGATAAATCAAGCGGCCATTCACTATAATTTGCCATACTCGTCGTTGTATGGTCGATTCAAAAGATGTAAATTTCAACCTGTTCAGAACCAGCCACCGATCACAACAGACGCTGAGCCCCGTGACGCCTCTGACCCTGTGGACCCCAGCGACCCCCTCGACCCCTACCCTCAGTATGGCGTCGTGAACCCTCACGCGCAAACTCAGGTCACCGACGTGTACCCACACGCGCATGTCTCATATGAAACTTACCCATACGCAATGTATTACACGCAGTGTGACGTCACTAGCTGA
Protein Sequence: MRHAAARGGCGGSGGGGPLPDSLSFATSQPPPKVTVQASAPWPAADQEMTGTETFRVKCEPLSDEEETSSQFTKSYFNKLSTEYAPIKLEHISQADENVSSNLLHHLQHGLEELAPAPAGPAATPVREQLCAPRHAALATLEPAADHHAGSSLISRHMEMMNEVADSSEFVPLMIKDEPSSEGEQPHISSDDTDSNGPTQETFSRSSPKSWTQLDMEKALEALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALLAIRAGHVSVQRAAHLYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKFQPVQNQPPITTDAEPRDASDPVDPSDPLDPYPQYGVVNPHAQTQVTDVYPHAHVSYETYPYAMYYTQCDVTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00159746;
90% Identity: iTF_00774429;
80% Identity: -