Basic Information

Insect: Heliconius cydno
Gene Symbol: -
Assembly: GCA_036379175.1
Location: FAPN01010420.1:7570-11853[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.0029 0.37 12.4 1.0 3 23 58 79 57 79 0.96

2 22 0.028 3.6 9.3 0.6 1 22 454 475 454 475 0.95

3 22 1.6 2e+02 3.8 0.2 1 23 517 540 517 540 0.89

4 22 0.31 40 6.0 0.5 1 14 549 562 549 570 0.82

5 22 0.08 10 7.8 1.0 3 21 620 638 618 641 0.93

6 22 0.029 3.7 9.2 5.3 1 23 647 670 647 670 0.95

7 22 0.19 25 6.6 0.0 1 23 696 719 696 719 0.90

8 22 0.011 1.4 10.5 3.4 1 23 724 746 724 746 0.97

9 22 0.024 3.1 9.5 0.2 1 23 752 775 752 775 0.95

10 22 0.0014 0.18 13.4 1.3 1 23 787 809 787 809 0.97

11 22 0.00087 0.11 14.0 4.0 1 23 852 875 852 875 0.96

12 22 0.0032 0.41 12.2 1.7 1 23 935 958 935 958 0.96

13 22 0.00073 0.093 14.2 2.3 2 23 981 1003 980 1003 0.95

14 22 0.052 6.7 8.4 0.1 2 23 1009 1031 1008 1031 0.93

15 22 0.0059 0.76 11.4 0.4 1 21 1075 1095 1075 1100 0.93

16 22 0.00074 0.095 14.2 0.6 1 23 1106 1128 1106 1128 0.93

17 22 5.3e-05 0.0068 17.8 0.3 2 23 1216 1238 1216 1238 0.93

18 22 1.1e-07 1.4e-05 26.3 1.1 3 23 1245 1265 1244 1265 0.98

19 22 0.0093 1.2 10.8 0.6 1 23 1282 1305 1282 1305 0.94

20 22 0.073 9.3 8.0 0.0 1 23 1328 1350 1328 1350 0.97

21 22 0.017 2.1 10.0 0.6 1 23 1356 1379 1356 1379 0.95

22 22 0.00015 0.02 16.4 0.4 1 23 1387 1410 1387 1410 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.0029	0.37	12.4	1.0	3	23	58	79	57	79	0.96
2	22	0.028	3.6	9.3	0.6	1	22	454	475	454	475	0.95
3	22	1.6	2e+02	3.8	0.2	1	23	517	540	517	540	0.89
4	22	0.31	40	6.0	0.5	1	14	549	562	549	570	0.82
5	22	0.08	10	7.8	1.0	3	21	620	638	618	641	0.93
6	22	0.029	3.7	9.2	5.3	1	23	647	670	647	670	0.95
7	22	0.19	25	6.6	0.0	1	23	696	719	696	719	0.90
8	22	0.011	1.4	10.5	3.4	1	23	724	746	724	746	0.97
9	22	0.024	3.1	9.5	0.2	1	23	752	775	752	775	0.95
10	22	0.0014	0.18	13.4	1.3	1	23	787	809	787	809	0.97
11	22	0.00087	0.11	14.0	4.0	1	23	852	875	852	875	0.96
12	22	0.0032	0.41	12.2	1.7	1	23	935	958	935	958	0.96
13	22	0.00073	0.093	14.2	2.3	2	23	981	1003	980	1003	0.95
14	22	0.052	6.7	8.4	0.1	2	23	1009	1031	1008	1031	0.93
15	22	0.0059	0.76	11.4	0.4	1	21	1075	1095	1075	1100	0.93
16	22	0.00074	0.095	14.2	0.6	1	23	1106	1128	1106	1128	0.93
17	22	5.3e-05	0.0068	17.8	0.3	2	23	1216	1238	1216	1238	0.93
18	22	1.1e-07	1.4e-05	26.3	1.1	3	23	1245	1265	1244	1265	0.98
19	22	0.0093	1.2	10.8	0.6	1	23	1282	1305	1282	1305	0.94
20	22	0.073	9.3	8.0	0.0	1	23	1328	1350	1328	1350	0.97
21	22	0.017	2.1	10.0	0.6	1	23	1356	1379	1356	1379	0.95
22	22	0.00015	0.02	16.4	0.4	1	23	1387	1410	1387	1410	0.96

Sequence Information

Coding Sequence: ATGGAAAGCGAAAAAGAAGAGGATTATGAAGAGGAAGATGAACAAGAATTGCTAGAGCCTCGCTCTTACACAAATGTACCAAATATGCCTGAAGTATCGATCACGGTGATGCGGCCAACTGGGGAAACCTTGCACGCACGTCAAGGTATACAGCAACTTGCGTCCAAAGACTGCCTAGTCTGTGGAAGATCCTACAGATATTCTCATAATGCAAGAAGACATGAGCTTACTGCTCATGGCTTTGATAGATACACAAATAAGGTCACAAACTTGAAATCTCGAACTCACATGCAACCTAAGTTTAGACCTAACCCATTCAATCCGAAGGCGCGCCTCATGCCAAACCCAATTAGTCATAAAATGCAGTATCACCCCAAGTCCATGCCAAACAAAATGATACCGCATAAAGTTGTTGCACAACCAAAGCCAATACCTATTCGGACCGCAAAAACTcctcaaaataatttaccgTATCCTCTTAGAATAAAAGCTCTAAAAGATttgcaaataaagaaaaaagaacctcaaattttaaaaactttattgacTTCCAAACCTGAGGTGTTAGTTTCTGAAccggaaataataaattcggGCCCAGAGAGTCCTGAAACATTGATTTCGGAACCCGAAATTGCGTCTTTCCAAGTAGAAGCAATTCTGTCGGAACCGGATACGTTTGTTAATACACATCCGGATgatgaagatgaaaataatcagGGGCAGAATTATGACACTGTTGACATGGATTCAGATAACGAAATTGAAATTGCACGCCAGGAAGAAAATGAGAGAAATGCAGAAGGGGAGGAAAATTGTGTGGAAATCGATGGCGATGATAATACACAAGACGAGAATAATCTACAAGAAAATCATGACGATACTGGGAAAGATCATCACAATGACAATGTTGAAAGTCAAGATATTGATACGGAGAACAATGTTGATGGAGATGGTAATTACAATGACGCCAAAGAAAATGAGTATGAGAATAACGAAAAGGAGGGTGAAGCAATGAATCATGAAGAAAATGACGACGATGATGATCTACCTCCTATGAATATTGCGCCTGTCGTCGAAATAAATGAGGAGATGCAAACAAATTCCTATAATAGTGATGGAAATGAGGAAGAGTTGGACGAAACGGTTGACCCCAATGATACCGTCGATAGAGACGATACAAAAGATCTTGACCCTAATAAAGTTTACGTAACGAAAACACAACGAGattttatactgaaatatagagatattatagaacaaataaatactaaacgtTGCTTATGTTGTAACAAAGAGCATCCCCGCAGAAAAGCGGTCATTCAACATTTGCAAAAGAATGGCCATAAGGTTCCTAAACATACATGCTATAATTGCGTAGTCACATTCACTCATATAGGAGCCTTATTAAGCCATATGCGATCAAATACGTGTACAGATCTGTGGAAAATTATCTACAACGAAAATGGGATAACTGATGATATAGTACTGGAAGACGAACCCAAGGACACGAAAGTTCAGTACAAGGACATCTTGAATGCGAGATCATATGCATGCAAGTTGTGTCCGgccaaatttcaattaaaacaatttattatgaaacataTTCTTGATGTACATGAGGATGGACAATCTCGCGTTCCTCATTCATGCGTGCACTGCGGTTTGCGTTTCAAAGATAAAGCTATAGGAAAAAGACACATTCGTAATGGAGAATGtactgtttatatttcttgtgATTTATGTTccgaaaagtttttaaatttacaagatTTCAATGATCATGCCGTAGCAGTGCACGCGGGTAGTTTTGATCCCGACAGTCAGAGCAAGTGCGTCGACGGCCGTCCCACAGACTGCCCCATATGTGGAAAGAAGAACAGCAGTTACCCTAATTTGGTAAAACATTTGAAGTGTATACATAACGAGGAGAAACCTCATCATTGTCAACATTGCGACTCCAAATTCGAGCAAACTGCTGATCTTAACAAGCACATCTATATGGAACACTCTGATAGGACGCTGGGCATGCAGTCTTCCGAGCCCGATATGACTCTCGTGAAAGAAGAAGCAGAAGAGTACCACTACTCGTGTACAGAATGCAACTCTATTTTTGAAACCGTCGATGCATGGACAGACCACCAGGTCGCTGAACACAATCAAGTAGCTCACCATTGTGATCAATGCGAGAAGAAATTTTTACGCCCGTCAGAACTTGCGGAGCATAAGAACACTCATTTAAGAGTTAAATTCTATCCTTGTAGTATTTGTACGAATTCTTACAGCACACCTTTAAAATTATCTGAACATGTACAGCAGGTCCATCCTGGAGCAGGTAAGACGCCAGGAGACACGGAATTCTTTTGTGACATTTGTATAAGATCATTCAAAAGCCGCCAAGCTTATTCTAATCATATGCGTATTCATGCGAAAGTGCCTACCACTAATAGAAAACCTGGAGAAAATAAAGGTTTTGCGCCCCAAATTATAGGGAAACCAATACGCCAGTTTTCTATGCAACCAGGTTTTAGTCCATATGTTCCAAATGCTCCTTATTGCTGTGATATTTGTGGAAAAGGATTTATGcacaaaaagaatatatgGAAACATAAGAAGGTGCTACATGCCGATCTTCTCGCTGATAGAAACGACAGCGAGGAGAACACAATGCAAGCGTCTACTGAAGaagatgaatataatattgatgaaAATGGCGCTATTTTGTCGACTCCGCAATTtaacagttttaattttacaaatttgtctaataatatacaacaaaCATCTCAAGATGCTTTACCATACTCTTGTGATTTATGCTACAAGAAATTCCCTCTAAGAACCAGTCTTTGGAAACACAAACGGGCAAAGCACGGAATTAATGCGAGTGCTGGTACAACGGAAACTCAAACACAACCTTCCAATGAAGGCACGAGGTCTAGCTGcactatatgtaaaataacctTCACAGACAAAAAATCTTACTACCGTCATAGAAAAAATGTTCACAAATCATCAGTACAGATGTGCAAAATATGTGGAAAGCCACTGAATTCGACATTAGAACTTTATGAACATCTGAAGGCAGCGCACGCTCGGGAACTGCTAGGTTATAATTCAAACCAGAGTTCAAATAAATCCCAAGACGTAAGTCAAGACATGGACGTGGAGGACGACGGAGATCAAGACTCTGTCGATCCCAGCATTGACTACCAGGCACGATACCCCTGCGACACTTGTGGAAAACAGTTTGTGGGACTGTTAGCTTTACAGAACCATCAGTGTATCAATCAGATTCATAGTCAACCACAAACATTTGATTGTGAAATATGCCACAAGAGCTACACTTCCATTGCGGCCCTGAAAAGTCACCGCGGCTGGCACTTGCGATCTCCTGACGGCAAGGCCGCTGCTAACAACTCGGGGCTTTGGATGCCTCAAAACAAAGTAACCAGCAAAGTCAGCAAACACGAAGTCGTAGATATTGTTCAAAACACTCGCTCCTCGACATCAGCAAACTTAGCCAAGAGACGGTTACCGCCCGAAGTGGAAGTGACCGTAGTCAaccctaataaaaaattacgatCTGACGATTCCATAGACTTGGatcatcaaaataattattctggAGGGCCAGAAGACAGGTACTGTAATATTTGTGACAAGGAGTTCACCAAGCGAGCTGCATACCAGCGCCACATGGACGAGGTGCACCAGCCGAACTCTGTATTCTGTCCAGTTTGCGACAAGTCGTTTACACGAAAATCCACCTTAATTGTACATATGAAGAAACATTACGAGGGCGGAGAGGGCAGCTCCGGCACACAAATAGATGAGGACGTCCACGCGTGTGAAGTGTGCGGCGCGCAGTTCGACACCGTGAAGGATTTGAACACCCACCACGCGATGGAGCATGGGGACGAGGCGGACGACACGGGGGAGTCTGAGGACGACGGAGGAGCTGTGGCACCACCTGGAGAGTTCACTTGCGGCCAGTGCGGGGACGGGGTGGCGACCCCTCGCGACCTGATAGCTCACAGGACAATGCACTCGACTCCCACCAAATTCTTCTGCAACATATGCAAGGTTTACTTCGCGAGAGCCCTCGACCTGTCGTCGCACACGCGGGCGAGGCACTCTGATAACGAAAAAGTGTTTTTCCCTTGCGCCATGTGCGACcggttttatatgaataaaaagagTTTACAGAGACACATCGAGATGGCCCACTGA
Protein Sequence: MESEKEEDYEEEDEQELLEPRSYTNVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHGFDRYTNKVTNLKSRTHMQPKFRPNPFNPKARLMPNPISHKMQYHPKSMPNKMIPHKVVAQPKPIPIRTAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDTFVNTHPDDEDENNQGQNYDTVDMDSDNEIEIARQEENERNAEGEENCVEIDGDDNTQDENNLQENHDDTGKDHHNDNVESQDIDTENNVDGDGNYNDAKENEYENNEKEGEAMNHEENDDDDDLPPMNIAPVVEINEEMQTNSYNSDGNEEELDETVDPNDTVDRDDTKDLDPNKVYVTKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDTKVQYKDILNARSYACKLCPAKFQLKQFIMKHILDVHEDGQSRVPHSCVHCGLRFKDKAIGKRHIRNGECTVYISCDLCSEKFLNLQDFNDHAVAVHAGSFDPDSQSKCVDGRPTDCPICGKKNSSYPNLVKHLKCIHNEEKPHHCQHCDSKFEQTADLNKHIYMEHSDRTLGMQSSEPDMTLVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPLKLSEHVQQVHPGAGKTPGDTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGENKGFAPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDEYNIDENGAILSTPQFNSFNFTNLSNNIQQTSQDALPYSCDLCYKKFPLRTSLWKHKRAKHGINASAGTTETQTQPSNEGTRSSCTICKITFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQSSNKSQDVSQDMDVEDDGDQDSVDPSIDYQARYPCDTCGKQFVGLLALQNHQCINQIHSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVVDIVQNTRSSTSANLAKRRLPPEVEVTVVNPNKKLRSDDSIDLDHQNNYSGGPEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQIDEDVHACEVCGAQFDTVKDLNTHHAMEHGDEADDTGESEDDGGAVAPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00897124;
90% Identity: iTF_00775435;
80% Identity: -