Hcon000421.1
Basic Information
- Insect
- Heliconius congener
- Gene Symbol
- -
- Assembly
- GCA_018230605.1
- Location
- DWAO01000106.1:12763-21593[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.0039 0.43 12.1 1.0 3 23 268 289 267 289 0.96 2 22 0.037 4.2 9.0 0.6 1 22 681 702 681 702 0.95 3 22 5.4 6e+02 2.2 0.3 1 22 744 765 744 767 0.82 4 22 0.42 47 5.7 0.5 1 14 776 789 776 797 0.82 5 22 0.25 27 6.5 1.1 3 21 847 865 845 868 0.93 6 22 0.039 4.4 9.0 5.3 1 23 874 897 874 897 0.95 7 22 0.26 29 6.4 0.0 1 23 923 946 923 946 0.90 8 22 0.015 1.7 10.3 3.4 1 23 951 973 951 973 0.97 9 22 0.033 3.6 9.2 0.2 1 23 979 1002 979 1002 0.95 10 22 0.0019 0.21 13.1 1.3 1 23 1014 1036 1014 1036 0.97 11 22 0.0012 0.13 13.8 4.0 1 23 1079 1102 1079 1102 0.96 12 22 0.0041 0.46 12.1 1.7 1 23 1162 1185 1162 1185 0.96 13 22 0.00098 0.11 14.0 2.3 2 23 1208 1230 1207 1230 0.95 14 22 0.07 7.8 8.2 0.1 2 23 1236 1258 1235 1258 0.93 15 22 0.008 0.89 11.1 0.2 1 21 1302 1322 1302 1323 0.95 16 22 0.001 0.11 14.0 0.6 1 23 1333 1355 1333 1355 0.93 17 22 7.1e-05 0.0079 17.6 0.3 2 23 1443 1465 1443 1465 0.93 18 22 1.4e-07 1.6e-05 26.1 1.1 3 23 1472 1492 1471 1492 0.98 19 22 0.0023 0.26 12.8 0.5 1 23 1509 1532 1509 1532 0.94 20 22 0.098 11 7.7 0.0 1 23 1555 1577 1555 1577 0.97 21 22 0.022 2.5 9.7 0.6 1 23 1583 1606 1583 1606 0.95 22 22 0.00021 0.023 16.1 0.4 1 23 1614 1637 1614 1637 0.96
Sequence Information
- Coding Sequence
- ATGGTTGACGACCTCTGGAATTGGTTATATTTCGTGTGCGTAATGTTGGCTCGCCTGACGCCATTTTACGCGCACATGCGCAGAACGACAGGTGGTCGGCGAGTGGCGACTCGACCCAGCTATTCCGACCGAACATCGACTTCTCATGCTCATCATCAGCCGCTATCGTGCTCAAGCAAGAACGACATGCAGTGCTTTGTGTTCAAACTGTGCTTGTCATCTCGATGCGAATTACTACCGATATTTCCTACCACCAGTTCGGATGACTCCGAACCTCCTGTCCTCGCCTCGAAAATCAAAGATTGCGTGTCAGTGCAGataagCGAAAATGACGACCTGCCAACTAATGTCTGCAGGAAATGCTTGGACAATGTTAATAACTGGCATATTTTCAAGACAATATGTGAAAGGACACAAAATAGGTTACAGTCTTTCATTAATAAGGACAGCAACCTACTAGAAGAGgtcaaaataaaaaatgaaccaATGTCAGATGAAGCCTATGATGATGGAGTGGTTATTGATGGATCATACCCTGACATTGAGaatGCTGgaccattaaataaaatacaacctGAAGGTCCACCCATATTGGCTTCATTGGGACTCACACCGAGGAGTGATAAGGGCATGGAAAGCGAAAAAGAAGAGGATTATGAAGAGGAAGATGAACAAGAATTGCTAGAGCCTCGCTCATACACAAATGTACCAAATATGCCTGAAGTGTCGATCACAGTGATGCGCCCAACTGGAGAAACCTTGCATGCACGTCAAGGTATACAGCAGCTTGCGTCTAAAGACTGTCTAGTCTGTGGAAGATCCTACAGATATTCGCATAATGCAAGAAGACACGAGCTTACTGCTCATGGCTTTGATAGATACACAAATAAGGTCACAAACTTGAAATCTCGAGCTCACATGCAACCTAAGTTTAGACCTAACCCATTCAATCCGAAGGCGCGCCTCATGCCAAACCCAATTAGTCATAAAATGCAGTATCACCCCAAGTCCATGCCAAACAAAATGATACCGCATAAAGTTGTTGCACAACCAAAGCCAATACCTATTCGGACCGCAAAGACTcctcaaaataatttaccgTATCCTCTTAGGATAAAAGCTCTAAAAGATttgcaaataaagaaaaaagaacctCAAATTTTGAAAACTTTATTGACATCCAAACCTGAGGTGTTAGTTTCTGAacctgaaataataaattcggGCCCAGAAAGCCCTGAAACATTGATTTCGGAACCCGAAATAGCCTCTTTCCAAGTAGAAACAATTCTGTCGGAGCCGGATACTTTTGTTAATACGCATCCGGATGATGAAGACGAAAATAACCAAGGGCAGAATTATGACACTGTTGATATGGATTCAGacaatgaaattgaaattgccCGCCAGGAAGAAAATAAGAGGCATGCAGAAGGGGAGGAAAATTGTGTGGAAATCGATGGCGATGATAATACACAAGACGAGAataatttacaagaaaatCATGACGATAATGGAAAAGATGATCACAATGATAACGTTGAAAGTCAAGATCTTGATACGGAGAACAATGTTGATGGAGATGAGAATTACAATGATGCCAAAGAAAATGAGTATGAGAGTAATGACAAGGTAGGTGAAGCAATGAATCACGAAGAAAATGACGACGATGACGATCTACCTCCTATGAGTATTGCGCCTGTCGTCgaaataaatgaagaaatacaaacaaattccTATAATAGTGATGGAAATGAGGAAGAGTTGGACGAAACGGTTGACCCCAATGATACCGTCGACGGAGACGGTGAAGCCGACGGGGAGGGTGACGCTGAAGGGGAAGAAGGGGAAGGTGAAGATATAAAAGACCTTGATCCTAATAAAGTTTATGTGACGAAAACACAACGAGATTTTATACTCAAATATAGAGATATTATAGAACAAATCAATACTAAACGTTGTTTATGTTGTAATAAAGAACATCCCCGCAGAAAAGCGGTCATTCAGCATTTGCAAAAGAATGGTCATAAAGTTCCAAAACATACATGCTACAATTGCGTTGTCACATTCACTCATATAGGAGCCTTATTAAGCCATATGCGATCAAACACGTGTACAGATCTATGGAAAATTATCTACAACGAAAATGGGATAACTGATGATATAGTACTGGAGGATGAACCCAAGGACTCGAAAGTTCAGTACAAGGACATCTTGAATGCGAGATCATATGCATGCAAGTTGTGTCCGgccaaatttcaattaaaacaatttattatgaaacatgTTCTCGATGTACATGAGGATGGGCAAACTCGCGTTCCTCATTCCTGCGTGCACTGCGGTTTGCGTTTCAAAGATAAAGCTATAGGAAAGAGACACATTCGTAATGGAGAATGTactgtttatatttcttgtgATTTATGTTCTGAAAAGTTTTTGAATTTACAAGATTTCAATGATCATGCCATAGCGGTGCATGCGGGTAGTTTTGATCCAGAAAATCAGAGCAAGTGCGTCGACGGCCGTCCCACAGACTGTCCCATATGTGGAAAGAAGAACAACAGTTACCCTAATTTGGTGAAACATTTGAAGTGTATACACAACGAGGAGAAACCTCATCATTGTCAACATTGTGATTCCAAATTTGAGCAAACTGCTGATCTTAACAAGCACATCTATATGGAACACTCTGATAGGACGCTTGGCATGCAGACTTCCGAGCCTGATATGACTCTCGTGAAAGAAGAGGCAGAAGAGTACCACTACTCGTGTACAGAATGCAATTCTATTTTTGAAACCGTCGATGCATGGACAGATCACCAGGTCGCTGAACACAATCAAGTGGCTCACCATTGTGATCAATGCGAGAAGAAATTTTTACGCCCGTCAGAACTTGCGGAGCATAAGAACACGCATTTAAGAGTTAAATTCTATCCTTGCAGTATTTGTACTAATTCTTACAGCACACCTCTAAAGTTATCTGAACATGTACAGCAGGTCCACCCTGGAGCAGGGAAGACCCCAGGAGACACGGAATTCTTTTGTGACATTTGTATAAGATCATTCAAAAGCCGCCAAGCTTATTCTAATCATATGCGTATTCATGCGAAAGTGCCTACCACTAATAGAAAACCTGGAGAAAATAAAGGTTTTGCGCCGCAAATTATAGGGAAGCCAATACGCCAATTCTCTATGCAACCAGGTTTTAGTCCATATGTTCCAAATGCTCCTTATTGCTGTGATATTTGTGGAAAAGGATTTATGcacaaaaagaatatatgGAAACATAAGAAGGTGCTACATGCCGATCTACTCGCTGATAGAAACGACAGCGAGGAGAACACAATGCAAGCATCTACTGAAGAAGATGAATACAATATTGATGAAAATGGCGCTATTTTGTCGACTCCGCAatttaacagttttaatttCACTAATTTGTCGAATAATATGCAACAAACATCTCAAGATGCTTTACCATACTCTTGTGAATTATGTTACAAGAAGTTCCCTCTACGAACAAGCCTTTGGAAACACAAACGGGCAAAGCATGGAATTAATGCAAGTGCCGGTACATCGGAAACTCAACCACAACCTTCCAACGAAGGCACGAGATCTAGCTGtactatatgtaaaataacctTCACAGACAAAAAATCGTACTACCGTCATAGAAAAAATGTTCACAAATCATCAGTACAGATGTGCAAAATATGCGGAAAACCACTTAATTCGACATTAGAACTTTACGAACATCTGAAGGCGGCGCACGCTCGGGAACTGCTAGGGTATAATTCAAACCAGAGTTCAAGTAAATCACAAGACGTAAGTCAAGACTTGGACGTGGAGGACGACGGAGATCACGACTCCGTCGATCCCAGCATCGACTACCAGGCACGATACCCCTGCGACACTTGTGGAAAACAGTTTGTGGGACTGTTAGCTTTACAGAACCATCAGTGTATCAATCAGATACAAAGCCAACCGCAAACATTTGATTGTGAAATATGTCACAAGAGCTACACTTCCATTGCGGCCCTGAAAAGTCACCGCGGCTGGCACTTGCGATCTCCCGACGGCAAGGCCGCTGCTAACAATTCAGGGCTTTGGATGCCTCAAAACAAGGTAACCAGCAAAGTCAGCAAACACGAAGTGATTGACATTCCTCAAAATACTCGCTCATCGACATCAGCAAACTTAGCCAAGAGACGGTTACCGCCCGAAGTGGAAGTGACCGTAGTTAACCCTAATAAGAAATTACGATCTGACGATTCCATAGACTTGGATcatcaaaacaatttttctggAGGGCCAGAAGATAGGTACTGTAATATTTGCGACAAGGAGTTCACCAAGCGAGCCGCGTACCAGCGTCATATGGACGAGGTGCACCAACCGAATTCGGTATTCTGTCCAGTTTGCGACAAGTCGTTTACACGAAAGTCCACCTTAATTGTTCATATGAAGAAACATTACGAGGGCGGAGAGGGCAGCTCCGGCACACAAATAGACGAGGACGTCCACGCGTGTGAAGTGTGCGGCGCGCAGTTCGAAACCGCGAAGGATTTGAACACCCACCACGCGATGGAGCATGGGGACGAAGTGGACGACACGGGCGAATCTGAGGACGACGGTGGAGCTGTGGCACAACCAGGGGAGTTCACTTGCGGCCAGTGCGGGGACGGAGTGGCGACCCCTCGCGACCTGATAGCTCACCGGACAATGCACTCGACTCCCACCAAGTTCTTCTGCAACATATGCAAGGTCTACTTCGCGAGAGCCCTCGACCTGTCCTCGCACACGCGGGCAAGGCACTCCGACAACGAAAAAGTGTTCTTCCCTTGCGCCATGTGCGACCGGttttatatgaacaaaaaGAGTTTACAGAGACACATCGAGATGGCCCACTGA
- Protein Sequence
- MVDDLWNWLYFVCVMLARLTPFYAHMRRTTGGRRVATRPSYSDRTSTSHAHHQPLSCSSKNDMQCFVFKLCLSSRCELLPIFPTTSSDDSEPPVLASKIKDCVSVQISENDDLPTNVCRKCLDNVNNWHIFKTICERTQNRLQSFINKDSNLLEEVKIKNEPMSDEAYDDGVVIDGSYPDIENAGPLNKIQPEGPPILASLGLTPRSDKGMESEKEEDYEEEDEQELLEPRSYTNVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRSYRYSHNARRHELTAHGFDRYTNKVTNLKSRAHMQPKFRPNPFNPKARLMPNPISHKMQYHPKSMPNKMIPHKVVAQPKPIPIRTAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDTFVNTHPDDEDENNQGQNYDTVDMDSDNEIEIARQEENKRHAEGEENCVEIDGDDNTQDENNLQENHDDNGKDDHNDNVESQDLDTENNVDGDENYNDAKENEYESNDKVGEAMNHEENDDDDDLPPMSIAPVVEINEEIQTNSYNSDGNEEELDETVDPNDTVDGDGEADGEGDAEGEEGEGEDIKDLDPNKVYVTKTQRDFILKYRDIIEQINTKRCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDSKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQTRVPHSCVHCGLRFKDKAIGKRHIRNGECTVYISCDLCSEKFLNLQDFNDHAIAVHAGSFDPENQSKCVDGRPTDCPICGKKNNSYPNLVKHLKCIHNEEKPHHCQHCDSKFEQTADLNKHIYMEHSDRTLGMQTSEPDMTLVKEEAEEYHYSCTECNSIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICTNSYSTPLKLSEHVQQVHPGAGKTPGDTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGENKGFAPQIIGKPIRQFSMQPGFSPYVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLADRNDSEENTMQASTEEDEYNIDENGAILSTPQFNSFNFTNLSNNMQQTSQDALPYSCELCYKKFPLRTSLWKHKRAKHGINASAGTSETQPQPSNEGTRSSCTICKITFTDKKSYYRHRKNVHKSSVQMCKICGKPLNSTLELYEHLKAAHARELLGYNSNQSSSKSQDVSQDLDVEDDGDHDSVDPSIDYQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTSKVSKHEVIDIPQNTRSSTSANLAKRRLPPEVEVTVVNPNKKLRSDDSIDLDHQNNFSGGPEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGEGSSGTQIDEDVHACEVCGAQFETAKDLNTHHAMEHGDEVDDTGESEDDGGAVAQPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00897124;
- 90% Identity
- iTF_00775435;
- 80% Identity
- -