Hcha010828.1
Basic Information
- Insect
- Heliconius charithonia
- Gene Symbol
- -
- Assembly
- GCA_030704555.1
- Location
- CM060820.1:4980482-4990702[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-11 1.9e-06 28.0 0.0 3 77 40 116 38 125 0.86
Sequence Information
- Coding Sequence
- ATGTCACTTGACAGGTACGACAAGTGGGACCGGGGcgggggcggcggcgcgggcggcgcgtggGCGGGCCGCGAGCCGCGCGACGCCCGCGAGCCCCGCGCCGAGCCGCGCGACACGCGCGACCGCGAGCGCGACCGGGAGCGCGAGCGGCAGGCGCGCGCGCACCAGATGTCGAACGCGCACGCCGCCGAGCCTGATGCCTCGTCCCTGTTCCCGGCGCCGTTTAGAGTGACGGGCAATAGGGATCGAGTGAGTCAGCAAATTCAAATCAAACTCGGCGACTACCGGCTCGCGCAAACCCTACTCGACGACCCCAGCAAGTCCATCGGAATATGCGCTGAACCCCCAAGTCCCGCTCCATGCGAACTGAAGACTTTTGGCTTTTAA
- Protein Sequence
- MSLDRYDKWDRGGGGGAGGAWAGREPRDAREPRAEPRDTRDRERDRERERQARAHQMSNAHAAEPDASSLFPAPFRVTGNRDRVSQQIQIKLGDYRLAQTLLDDPSKSIGICAEPPSPAPCELKTFGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01079903;
- 90% Identity
- iTF_00781033;
- 80% Identity
- iTF_00778015;