Haoe011599.1
Basic Information
- Insect
- Heliconius aoede
- Gene Symbol
- -
- Assembly
- GCA_037355905.1
- Location
- JBAIZZ010000305.1:1854783-1858502[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-13 3.2e-10 39.7 0.0 1 36 184 220 184 221 0.93
Sequence Information
- Coding Sequence
- atgaacgaggacaataatataatgatatctgaatatttatgtagatgTAAATGTTGCTTAAATGATATAGAATTGAAAAGCTTATGGGAAGTGTATGTGAGTGATGGCGGTGTTGAAATATACGGAAATATGGTTGTTGAGTGTTTTGCTTTGACGtggGTACCATCTGATGAACCAGAACATATTTGTGAGATGTGTATATTGAAATTGCGACAAGCACTTGATTTTAAGAGGAATATATTGGCTATTGAAGATGTCCTATTAAATGgaaTAGATACAAAAGAAGAAATAGACGATCAGTCTGATATAACATCATCGACAACACTAGTAAAATATGTTCCAATTAATGAGGAATATGAGCATGTTGAATATTTGGAGCTTGAAGAAATGTCTGAAGAACAACCACATCTAAAAATCCTAACAGAATTAGTCAATATAAGTTCAGGTCCCTCAACACCAAGGGCCTCAAGTTCAGGGTCCCCCAGCCCATTACGAAAGTGGcctaaaaagaagaaaaagcatgaattaactaaattttataaacaatatactaAAGACGATTTAGCGGAAGCGATAAGAGTTGTTAGGAACGGCGAAATGAGTTGCGCATATGCAGCTAACAAGTATGGCATCCCCAAGAAGACTTTGACAGTTAAAGTTAACTTGTTTAGTGATGCTGATGgcGACGAATCCACCAACAagcattacaaattaatagaagaaattaaagtcCTCTTAACACACACTACAGCTATGCcgttcaaaacaaaaacaacaagaTATTACTGTTTCTACTGTTCCACCGAAGGCCCCTGCTTCGAAGATACTGACGAACTTAGAGAACATACGAAAACAAAACACGAACACGAATGgactaaaatagaattatatatgagACCGCAATGGCTAaatgaagttataaaaatggaTGTCCTAGatatacattgtaaaatatgtcAAACAATGTTGCCAGACTGGAATAATTTGTTTGTTCATTTGGCAGAAATACATAATTTGGAGTTTGATATGGCATACACTAAAATTATACCTTATGGTCTAAGTGCTAATTTAAAATGCTTTTTGTGTGGGCAAAGTTTTCACAATTTCGGACATTTGGACAGTCATATGAATAAtcattatagtaattatatttgttacgaGTGTGGCGACACCTTTCTTTCAGCCAGTCGTTTGGATAAACACTTGAGTGTACATAAAATTGGTAATTATCCTTGTGAATATTGTGATAAAGTAttcaaattagaaaaatatcgcTCAAAACATGTAAGCTTAGTACATATACAAGAAAATACAGTCAAATGTTTGTACTGTCCGGAGAAATTCCTAGGTATTTTTCAAAGGCACATTCATGTGACTGagaaacataaagaaaaacttaaatacaTGACTTGTGAATACTGTGGGAACAGTTATACGTGGAAGCCGTATTTTTTAGCCCATATGAAAAGAAGGCACGGTTCTGAGAAGaaatataagtgtaaatattGTGAGAAATGTTTCTTAATGAAGTATGAATTGAAGAACCACATGGTGAGACATACGGCGGAGAAGAAATTTGTATGTGGCTTATGTGGGCTAGGGTTTACTAGGATGGTTAGCTTAAAAAAGCATTGTCAGGCTCATGAAGAAGAGACTATTGAATga
- Protein Sequence
- MNEDNNIMISEYLCRCKCCLNDIELKSLWEVYVSDGGVEIYGNMVVECFALTWVPSDEPEHICEMCILKLRQALDFKRNILAIEDVLLNGIDTKEEIDDQSDITSSTTLVKYVPINEEYEHVEYLELEEMSEEQPHLKILTELVNISSGPSTPRASSSGSPSPLRKWPKKKKKHELTKFYKQYTKDDLAEAIRVVRNGEMSCAYAANKYGIPKKTLTVKVNLFSDADGDESTNKHYKLIEEIKVLLTHTTAMPFKTKTTRYYCFYCSTEGPCFEDTDELREHTKTKHEHEWTKIELYMRPQWLNEVIKMDVLDIHCKICQTMLPDWNNLFVHLAEIHNLEFDMAYTKIIPYGLSANLKCFLCGQSFHNFGHLDSHMNNHYSNYICYECGDTFLSASRLDKHLSVHKIGNYPCEYCDKVFKLEKYRSKHVSLVHIQENTVKCLYCPEKFLGIFQRHIHVTEKHKEKLKYMTCEYCGNSYTWKPYFLAHMKRRHGSEKKYKCKYCEKCFLMKYELKNHMVRHTAEKKFVCGLCGLGFTRMVSLKKHCQAHEEETIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457174;
- 90% Identity
- iTF_00780193; iTF_00781763; iTF_00777638; iTF_00783015; iTF_00774857; iTF_00782571; iTF_00779854; iTF_00777936; iTF_00779441; iTF_00777334; iTF_00780634; iTF_00777053; iTF_00782237; iTF_00778367; iTF_00776672; iTF_00457607; iTF_00457174;
- 80% Identity
- iTF_00774857;