Hros008639.1
Basic Information
- Insect
- Hedychridium roseum
- Gene Symbol
- Hr39_1
- Assembly
- GCA_963989215.1
- Location
- OZ022312.1:7173172-7176956[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 4 1.9e+04 -7.1 8.0 122 157 67 95 21 122 0.44 2 6 0.56 2.6e+03 -2.5 6.0 54 163 299 408 257 429 0.62 3 6 4 1.9e+04 -5.8 7.6 72 162 445 539 417 553 0.58 4 6 7.8e-08 0.00037 20.1 0.0 1 21 620 640 620 647 0.92 5 6 0.71 3.4e+03 -2.8 0.0 86 113 676 703 654 710 0.60 6 6 4.7e-70 2.2e-66 225.0 0.0 197 408 806 1011 785 1011 0.95
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAATGGGCCCGGCGAGGGCCCGGGGCCGGGCCCGGGCCCCGGTTGGTGGCCAACCGCTGCTCAGCAGACATGGAAGTCCTCGTCCGGTACGTCCTCGAGCTCCTCGTCCTTGTCCGTCTCCGCGAATGTCGGGGGTTCCAGCTCCGTTTCTGCTGGGACTGGCGGCAATGCAGCCACCTCTGCCACCTCTACGTCTTCTGCCCCCGCGACGACCGTAGCGTCGTCCTCGTCCACCTGCTGTTCCTCGTCTTCCATGGCCGCGTCGTCTACGATGACGGCCGCACGTACCACCGAGACTGGAAAGAACGTATCCGTCACAACCATCAACGTACCGCCCACCCACGAAATGCACGACGGTAAAGGTGTATGCAAGTATTTAGGCGGGCAAAACGGTGTCACCGTATCCGTTGTGTCGAGTTGTGGATCTGTACTTGGTTGCGGAAATGCCGGTCCTGGTTCTGCTGGTCTTGGTTCGAGCGGTGGACAACACGGGGTAGGGATTGGCATTGGCATCCTGCCGCCGAACGCCAACGATATCGATGACGCGGAGGACAGTGATGGCGAGGTCAGCAAGATCGATTTCCGTGGCGTAAATCTTCGTACGAAGAAAAAACGGGACGCGAATGCCAGTCAGAATGGCGAGAAAATCGGTGATGGGGATGCCGATGACGGAAGTGTGGTTGTTGGTGGTTGCTGTGACAATGATGTCTCACAACAGCAACCTGAAAGGCCCATGTCCTGGGAAGGGGAACTCTCGGACCAAGAAATGTCTTCCAATACCATTACGAATCAGGATCAACACGAGGAAACGTCTATGGAAGGCGTGCAGGTTTGCGGTGCGAGTCCTGGGCCGATGGAACAGAAGTTCCCGATAAAACCGGAGCCGGACTTTCGGTCCAGCCCGGGATTCGCCATCGGATCGCTGCACGATGCAGGAATGCCTCTGACCCATGGGCAGCAAttgcagcagcaacagcaacaacaacggAACATCGAGAACCTCGAACAGACGCAGCAGAGCGATTTGCCTCTACTCGTAGGAAAACTTCTCGGCGGATATAATAGTTCAACGCCGAATCACAGTCCGGTGCTTAACCCGAGGCATCATTTAACGAAACACAGTCACACGAGGTCGCAGGTTCCGTCTCCGGATTCTGCAATTCATTCGGCGTACAGTGTCTTCAGCTCCCCGACACAGAGTCCTCATGCTGCTCGACACTCTGCCCTTGGAGCTGGTAGTCCAATACCGTCCTCGTCACTGTCTCTTTCACGGCACAGCTTCAACAATTCCACATCTTCGTTGTCCCTCTCGTTATCGCACTCGCTTTCTCGCAATAATTCTGACGCCTCGAGTAGTTGCTATAGTTACGGTTCTTTGAGCCCTCCAACTCATTCGCCCGTCCAGCAACCGCGACATCCACACGCGCATTCCCAACATCATCAACATCAGGTCGCACAGGGTAGTCCCCTGCATTTACCCAGTACAGCATCGACTGGTGTGACTGGTCATCATTACTCATCGGCGCCAGGATCAGAACTGTCTCCGGATGGTCATGTAGGCGGCGACGAGCAAGAGGATTGTAGAATCCCATCCGCCCCGTCGGGGATCTCGACGAGACAGCAACTGATCAACAGTCCATGTCCAATCTGCGGGGACAAGATAAGCGGCTTTCACTATGGAATCTTCTCCTGCGAGTCCTGCAAGGGCTTCTTCAAACGTACCGTCCAGAACCGCAAAAACTACGTGTGCCTCAGGGGCGCTGGTTGTCCTGTCACAGTCGCCACGCGGAAGAAGTGTCCCGCGTGTCGGTTTGATAAGTGCCTTAACATGGGCATGAAACTCGAGGCGATCAGGGAGGACCGTACCAGAGGCGGCAGAAGCACATATCAGTGCACTTACACGTTGCCGGCAAATCTTGTTGGTAGTCCTGCCGGCGGCATGCCGGGAGACAAGATTACGGCCACCGGTAACTGCAGTCCAGCGCCTTCCGGCGCGGAGCATCATTACTCCGTCAGACATCACTCAAATCACTCGCATAAGATGCAGGTCGTACCTCAGCTTCTTCAGGATATAATGGACGTCGAGCATCTTTGGCACTACAACGATAACGATCGTGTTACCGGGAGCCCGGCTGGCAGTGGTAGAGGCGGTTGCAGCGGAGATGCAATGCTCGTGGGCCAAGGTCAAGGCGGACTTCCAACCGGAGGAGGCGGTACTGGCGGTAACGTCGACGGGTCAAATGACGATAGCTCGCCAAACGGTACCGGCAACGGAAACGGAACGAACGGGCGGGTCGAACCCCCCAGGCCTTGTTCAACCGGTTCTGTTTGCTCCACCAGCGGACACGAGCAACGACCACCCACTACAATCGGCTCCAGCAATGGCAACTCCCACATTAGCAACAGCTCCAATGGCAATTCTACACAGCATCCTGACTTTCTTTCCAACCTCTGCAACATCGCGGATCATCGGCTTTATAAGATCGTTAAATGGTGCAAGAGCTTGCCGCTCTTTAAGAATATCTCTATAGATGACCAGATATGcctgttaattaattcatgGTGCGAACTGTTGCTTTTCTCCTGCTGCTTTCGCAGCATGAGCACCCCCGGCGAGATAAGGGTATCTCTCGGGAAGTCAATTACCCTTGAACAGGCGAGACAATTAGGTCTTGCCACCTGCATCGAGAGAATGCTGGCATTCACTAATAATCTGAGAAGGCTAAGAGTCGATCAATATGAATACGTGGCGATgaagGTAATAGTATTGCTGACATCAGATACGAGTGAATTGAAGGAGCCTGAGAAGGTTAGAGCTTCTCAAGAAAAGGCCCTTCAGGCACTACAGCAATACACTATTGCCAGGTATCCAGAGATGCCGGCAAAATTCGGTGAACTCCTACTCAGGATTCCAGATTTACAGCGAACGTGCCAAGCGGGAAAAGAGTTACTGAGCGCAAAGCGAGCCGAAGGCGAAGGCAGCTCGTTTAATCTGCTAATGGAACTCTTGAGAGGAGATCATTGA
- Protein Sequence
- MSEQNGPGEGPGPGPGPGWWPTAAQQTWKSSSGTSSSSSSLSVSANVGGSSSVSAGTGGNAATSATSTSSAPATTVASSSSTCCSSSSMAASSTMTAARTTETGKNVSVTTINVPPTHEMHDGKGVCKYLGGQNGVTVSVVSSCGSVLGCGNAGPGSAGLGSSGGQHGVGIGIGILPPNANDIDDAEDSDGEVSKIDFRGVNLRTKKKRDANASQNGEKIGDGDADDGSVVVGGCCDNDVSQQQPERPMSWEGELSDQEMSSNTITNQDQHEETSMEGVQVCGASPGPMEQKFPIKPEPDFRSSPGFAIGSLHDAGMPLTHGQQLQQQQQQQRNIENLEQTQQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHAHSQHHQHQVAQGSPLHLPSTASTGVTGHHYSSAPGSELSPDGHVGGDEQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMPGDKITATGNCSPAPSGAEHHYSVRHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRVTGSPAGSGRGGCSGDAMLVGQGQGGLPTGGGGTGGNVDGSNDDSSPNGTGNGNGTNGRVEPPRPCSTGSVCSTSGHEQRPPTTIGSSNGNSHISNSSNGNSTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00773880; iTF_00754671; iTF_00754838; iTF_00754681;
- 90% Identity
- iTF_00773880;
- 80% Identity
- iTF_00773880;