Gfla003427.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Gonatopus flavifemur
Gene Symbol
Hr39
Assembly
GCA_018340375.1
Location
Contig2:36634766-36718152[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 4 2.3e+04 -6.5 7.0 127 153 36 60 19 89 0.45
2 4 4 2.3e+04 -13.6 17.7 59 153 407 502 227 520 0.70
3 4 6.3e-08 0.00036 20.4 0.1 1 22 613 634 613 679 0.88
4 4 6.9e-70 3.9e-66 224.5 0.0 194 408 788 1005 640 1005 0.84

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCGGTGAGGGACCACCACCCGGTACCGGACCGGGACCAGGCTCGGGGTGGTGGCCAACTGCGACCCAATCTTGGAAATCTTCCTCTTCATCCTCTACCTCCTCGTCGTCCATTTCATCTACTGCTTCATCCTCCGTTACGGGTGTATCGGCAACATCTTCGGCCTCAGCGGGTTCTTCAACGGCATCTTCGATCGCTACTGCCTGCTCTTCGTCTTCCATTGGTGGTGTTCATAATAGCACTATAACCGCTGCACGGACTTCGGAAACTGGGAAAAATGTGTCTGTGACAACGATCAATGTACCACCCAATCACGAAATGCACGACGGAAAAGGTATATGTAAATACTTGGGTGGGCAAAATGGAGTTACGGTATCGGTTGTATCGAGTTGCGGTCCCATACACGGTTGTGGAACTACCAATAGTTCCGGGACAAATATCCATACCAACGCTGGGTTGCTGCATGGTATTGGTATAGACGTTTTAAGACCCAATGCTGCAACCACGAATATCGATAATCCTGAAGATAGTGACGGAGAAGTGAGTAAAATCGATTTTCGAGGGGTTAATTTACGTACTAAAAAGAAGCGAGATAGTCAAAATGGGGAATCGAAGATTGGTGGAACTGATAGTGAAGTTGATGCAGAAGGCGGTTGCTGTGAAGATGCTTCACAGCAACAACCAGAAAGGCCAATGTCTTGGGAAGGTGAACTATCGGATCAAGAAATGTCTTCCAATACTATCACTAATCAGGATCAACATGAGGAAACGTCGATGGAAGGTGTTCAGGTATGCGGAGCAAGTCCTGGACCAATGGAACAGAAATTCCCGATCAAACCAGAACCTGATTTTCGGTCTAGTCCAGGATTTGGGATAGGATCGTTGCACGAGCCTAGTGGTCTACACCTTACACACAACCAACAACTTCGACATCAGCAACAGCAGCGTGGTGGCATCGAAGGTCTTGAACAAACACCACAGTCCGATTTGCCGTTGCTGGTTGGGAAATTACTTGGTGGTTACAATAGTTCAACCCCAAATCATAGTCCTGTTCTGAACCCACGGCATCATCTGACGAAGCACGGTCACACGAGATCACAGGTCCCCTCTCCAGATTCTGCAATCCATTCGGCGTACAGCGTATTCAGTTCACCGACGCAGAGTCCTCACGCCGCTCGACATTCGGCACTCGGTGCTGGTAGTCCAATACCTTCTTCATCCCTATCCCTCTCACGTCATAGTTTCAACAATTCGACATCCTCGTTATCACTTTCATTATCTCATTCATTATCACGTAATAATTCTGATGCCTCGAGTAGCTGCTACAGTTACGGATCTCTAAGTCCACCCACGCATTCACCCGTCCAACAGCCAAGGCATCCACACGCGCACTCACAACATCATCAACATCAGGCTCAAGGTAGTCCATTGCACATACCACCCGCATCTTCGACTGCAGCCGCTGTTCCAACGACTCATCATTATTCCACCACTCCCGGGGGAGCTGAACTGTCTCCGGATGGTCATTCGGTAGTGGAGGATCAAGAGGATTGCAGAATCCCATCAGCTCCAACGGGGATTTCGACTAGACAACAACTGATCAACAGTCCATGTCCGATTTGCGGTGACAAGATAAGCGGTTTCCATTATGGCATATTTTCTTGCGAATCCTGCAAAGGATTTTTCAAACGTACCGTCCAGAATCGTAAAAATTATGTTTGTTTACGGGGCGCCAGTTGTCCAGTGACCGTAGCTACGCGTAAAAAGTGCCCAGCTTGCCGCTTTGATAAGTGCCTTAACATGGGCATGAAGCTCGAAGCTATCCGGGAGGATCGCACCCGGGGTGGTAGAAGTACATATCAATGTACTTACACTCTACCTGCCAATTTGGTGGGTGGTTCGGCCAGTGGCATGTCCAGTGATAAGATAACAGGCGCTGGAAATTGTAGCCCCGCGCCGCCTGGTTCTGAACATCATTATTCTGTCAGACATCACTCGAGTCATTCCCACAAAGTACAAGTGGTACCGCAACTTTTGCAAGATATCATGGATGTGGAACATTTATGGCATTACAATGACAATGATCGTGTATCGGGTAGTTCCAGTATGTTAAGTGGTAGTGGAAGGGGTAGTGGAGATTCGTTATTGGGAAGTGTCGATACGGTGGGCGGAGGAGCAAGACCGCCCGTTGGAACTTTGAGTAGCAGCGGACAAGGAAGCACAGGCAGTCCGTCAAACGGAACGGATCAAACCAATAATAGAAGGCCTGATTCGAGACCTTGCAGCACAGGACCTTCCGGTACTGGTCACGAACACCGTAATGCAACTAATATTCCTAACAATACAAACAACGGCAATTCTCAAATCGGTACCGGCAATTCGCCTAACGGAAATCCAACGCAACACCCCGACTTCCTTTCGAATCTTTGCAATATTGCTGACCATCGACTTTATAAAATAGTTAAATGGTGTAAAAGTCTACCACTTTTCAAAAACATATCGATCGACGATCAAATCTGTTTATTAATCAATTCCTGGTGCGAATTATTGCTGTTCTCTTGCTGTTTCCGCAGCATGAGTACACCCGGAGAAATAAGAGTGTCTCTCGGCAAGTCTATAACACTGGAACAGGCCAGACAGCTTGGCTTGGCGACTTGCATCGAGAGGATGCTCGCATTCACCAATAATTTGAGAAGACTGAGGGTCGATCAGTACGAATACGTTGCTATGAAGGTTATAGTATTGCTCACTTCAGACACAAGCGAATTAAAAGAGCCTGAAAAAGTCCGAGCTTCTCAAGAAAAAGCTCTTCAAGCGTTGCAACAATATACGATCGCAAGGTACCCGGAAATGCCTGCTAAATTTGGTGAACTTCTGCTCAGGATTCCTGATCTGCAGAGAACTTGTCAGGCGGGTAAAGAATTGCTCAGCGCGAAACGAGCGGAAGGAGAAGGCAGCTCTTTTAATTTACTTATGGAACTGTTGAGGGGAGATCACTGA
Protein Sequence
MSEQNGPGEGPPPGTGPGPGSGWWPTATQSWKSSSSSSTSSSSISSTASSSVTGVSATSSASAGSSTASSIATACSSSSIGGVHNSTITAARTSETGKNVSVTTINVPPNHEMHDGKGICKYLGGQNGVTVSVVSSCGPIHGCGTTNSSGTNIHTNAGLLHGIGIDVLRPNAATTNIDNPEDSDGEVSKIDFRGVNLRTKKKRDSQNGESKIGGTDSEVDAEGGCCEDASQQQPERPMSWEGELSDQEMSSNTITNQDQHEETSMEGVQVCGASPGPMEQKFPIKPEPDFRSSPGFGIGSLHEPSGLHLTHNQQLRHQQQQRGGIEGLEQTPQSDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHGHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHAHSQHHQHQAQGSPLHIPPASSTAAAVPTTHHYSTTPGGAELSPDGHSVVEDQEDCRIPSAPTGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGASCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGGSASGMSSDKITGAGNCSPAPPGSEHHYSVRHHSSHSHKVQVVPQLLQDIMDVEHLWHYNDNDRVSGSSSMLSGSGRGSGDSLLGSVDTVGGGARPPVGTLSSSGQGSTGSPSNGTDQTNNRRPDSRPCSTGPSGTGHEHRNATNIPNNTNNGNSQIGTGNSPNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00773849;
90% Identity
iTF_00754671;
80% Identity
iTF_00754671;