Basic Information

Insect: Hedya salicella
Gene Symbol: -
Assembly: GCA_905404275.1
Location: FR990097.1:49161310-49167702[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0025 0.28 13.1 0.3 1 20 72 91 72 93 0.95

2 26 0.016 1.8 10.5 0.6 2 23 165 186 164 186 0.97

3 26 0.0033 0.37 12.7 0.1 1 23 190 212 190 212 0.96

4 26 0.23 26 6.9 0.4 1 15 217 231 217 240 0.78

5 26 0.031 3.5 9.6 0.3 1 23 246 269 246 269 0.95

6 26 0.0013 0.15 13.9 1.1 1 23 276 299 276 299 0.97

7 26 0.00011 0.012 17.4 1.7 1 23 306 328 306 328 0.96

8 26 3.1e-06 0.00034 22.2 2.5 1 23 334 356 334 356 0.98

9 26 0.00072 0.081 14.8 0.1 3 23 361 382 359 382 0.95

10 26 0.27 31 6.6 0.1 1 23 504 526 504 526 0.94

11 26 0.0055 0.62 12.0 3.7 1 23 594 616 594 616 0.98

12 26 0.013 1.5 10.8 0.2 3 23 622 642 621 642 0.95

13 26 0.0056 0.63 12.0 0.4 1 23 650 673 650 673 0.95

14 26 0.18 20 7.3 0.4 1 23 679 702 679 702 0.95

15 26 0.045 5.1 9.1 3.2 1 23 708 731 708 731 0.96

16 26 0.00041 0.046 15.5 0.2 1 23 737 759 737 759 0.96

17 26 5.3e-06 0.0006 21.5 1.8 1 23 765 787 765 787 0.99

18 26 0.00083 0.093 14.6 4.8 1 23 793 815 793 816 0.96

19 26 0.025 2.8 9.9 2.3 1 23 978 1000 978 1000 0.96

20 26 7.5e-05 0.0084 17.8 1.5 1 23 1004 1026 1004 1026 0.98

21 26 0.0068 0.76 11.7 0.1 1 23 1031 1054 1031 1054 0.95

22 26 0.0013 0.14 14.0 2.7 1 23 1060 1083 1060 1083 0.98

23 26 0.021 2.4 10.1 1.6 1 23 1090 1113 1090 1113 0.95

24 26 0.00039 0.044 15.6 1.5 1 23 1119 1141 1119 1141 0.97

25 26 9.8e-06 0.0011 20.6 0.5 1 23 1147 1169 1147 1169 0.99

26 26 8.1e-06 0.0009 20.9 3.0 1 23 1175 1197 1175 1198 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0025	0.28	13.1	0.3	1	20	72	91	72	93	0.95
2	26	0.016	1.8	10.5	0.6	2	23	165	186	164	186	0.97
3	26	0.0033	0.37	12.7	0.1	1	23	190	212	190	212	0.96
4	26	0.23	26	6.9	0.4	1	15	217	231	217	240	0.78
5	26	0.031	3.5	9.6	0.3	1	23	246	269	246	269	0.95
6	26	0.0013	0.15	13.9	1.1	1	23	276	299	276	299	0.97
7	26	0.00011	0.012	17.4	1.7	1	23	306	328	306	328	0.96
8	26	3.1e-06	0.00034	22.2	2.5	1	23	334	356	334	356	0.98
9	26	0.00072	0.081	14.8	0.1	3	23	361	382	359	382	0.95
10	26	0.27	31	6.6	0.1	1	23	504	526	504	526	0.94
11	26	0.0055	0.62	12.0	3.7	1	23	594	616	594	616	0.98
12	26	0.013	1.5	10.8	0.2	3	23	622	642	621	642	0.95
13	26	0.0056	0.63	12.0	0.4	1	23	650	673	650	673	0.95
14	26	0.18	20	7.3	0.4	1	23	679	702	679	702	0.95
15	26	0.045	5.1	9.1	3.2	1	23	708	731	708	731	0.96
16	26	0.00041	0.046	15.5	0.2	1	23	737	759	737	759	0.96
17	26	5.3e-06	0.0006	21.5	1.8	1	23	765	787	765	787	0.99
18	26	0.00083	0.093	14.6	4.8	1	23	793	815	793	816	0.96
19	26	0.025	2.8	9.9	2.3	1	23	978	1000	978	1000	0.96
20	26	7.5e-05	0.0084	17.8	1.5	1	23	1004	1026	1004	1026	0.98
21	26	0.0068	0.76	11.7	0.1	1	23	1031	1054	1031	1054	0.95
22	26	0.0013	0.14	14.0	2.7	1	23	1060	1083	1060	1083	0.98
23	26	0.021	2.4	10.1	1.6	1	23	1090	1113	1090	1113	0.95
24	26	0.00039	0.044	15.6	1.5	1	23	1119	1141	1119	1141	0.97
25	26	9.8e-06	0.0011	20.6	0.5	1	23	1147	1169	1147	1169	0.99
26	26	8.1e-06	0.0009	20.9	3.0	1	23	1175	1197	1175	1198	0.96

Sequence Information

Coding Sequence: ATGTTTCCTAATGAACAGTGGCgaCGCAGCCAAACCGAACATGACACTGTGATAAAGGTAGAGCCTAGCGATATACAAATAGAAAATTTGCTTAGAGAAAAACCAAGATACCAGCGGAGCGCTCGGGCAGAGGCCAGGTTCGCCACGAAGAGAAATGCTACGGCCATACTCGAGTGCTGGTCCGTCAACCCCTTCAGGTGGAAGCGCAACCAGTTCAAATGCGCCTACTGCGAAGCCAGTTTCACAGACTGCGCGCTGCTGCGGCTTCACATAGGGACTTGCTCCTCCCAACACAGCGTCAAAGACATCTATAGCAAGTTCAAAGAGATGTCCCTCATCAACATCGACGTGACGGAGGCTGTATGCCGTCTCTGCGCACTACCGTACAGCGACGTTAAACAGATGCGAGAGCACGTCATCGAACACGGCTACGATTTCGAAATAAACCAACCTGACGGCGTCCTCCCGTTCTTCCTCAATAAAGAATCGTGGAGATGCCTGATCTGTCAAGAAAAATTCAACAACTTCCTAAAACTTTATGAGCATATGAACATACATTACCAACATTACATTTGTCCAACGTGTGGGAAGGGATACATGACGGCTCCAAGACTGAGGAAGCATTCAGAAGTTCACATCACTGGGACGTTTCCTTGCAACGAATGCCCCAAGATATTCAGAATGCGCGCAGCTAGAGACTATCACAAGGCACACGCTCATGCGAAAGCACCCAGATACGAATGCCCTCAATGTAACATGCGCTTCGACGGATACTACGACAGAATGAATCACCTCAATGAAGCCCATAGTGAAAAAGAAGTCTTATACAGCTGTCCGCACTGTGAACTTTCTTTTAAAACCTCAGGAAAGCGAGCATTACACGTCCGATCAGTGCATTTCCCGCCGCAACGTGACTTCAGATGTTCGAGCTGTGAATGGAGTTTCAAAACTGCTTACGAACTTAGACGGCATAAAGTGAAACATTCCGGTGAAAGAAATTTTCACTGTGACGTGTGTGATAAATCGTTTCCGAGGAATAGGGCGTTGAGAACACATTTGAAAACGCACGACGATTTGGCCTGTAAATGGTGCGGAGCGTTGTTCAAACAGCGGGTGCAATTAGTAACACACATGAGAGAAATTCATTCGGATGTGCgttCCGCTAGTGCGGACGCGGAGGCAAAAGTAGGAGTTAGACGTGTTAGACAGTTAAAGGAGAATGTAAGCGCTCGCCAGATGCGTCGGCGCCGCCGCGCCAACAACGAGTTGCCGGAAGAATCCGAGAAACGTATTTCTAAAACTATGATGCGAAGGAACGCTATGATGCTTTTACAATGTTCTACCGCGTGGGCCTTCCGCTGGTTCCACAGCGCTTTTTACTGCTCTTACTggtccATCGACCTCAATCTTAAATGGAAACCGAAGCGCAAGTATAACGATCACAGAGACAATGCGGCTATTATAATAGAGTGTTCCAACGTCTGCCCGTTCAGGTGGAAACGGGGGGCATTCACCTGCGCCTTCTGTCCCATTTCATTCGGGGATTTCAGCGGCGTCAGAGACCACGCACTCGAACACCCTAACCGGGTCGAGGCGATGCGTCTGGCCCGCCCCTTAGACAACGTCAAAGTAGAGATCAGCGGCCTCCGCTGCGAACTCTGCTTGGAACTCATTAAAGACGTTGAAACACTAAAGGAACACTTACTTGAAATCCACAATAAGCCTATTAGCAAAGACCACGCTATCGGTGTCACTCCTTTCCTTATAAAAGGAAAGGACTTCGTTTGCACACATTGTAAAGAACAGTTTGAGCTGTTTTCCAAATTAAATACCCATATGAATCAACATTATCCAAATAACATATGCTTCCAATGTGGCAAAGCGTTTGCCGCCGCCCACAGGCTTAAGGCTCACTTAGTTATACACGAAGCTTCGAATAGTCTCCAATATAAATGTTCTAAATGCGACGACGTGTTCACGACACGGGCTTTGAGGAACAGTCACATGGCGTTAGCACACGGTCCCGAGTACCGCTATAGATGTCCGTATTGTAACGACTCGTTCTTAAGATATGCAGATAGGGCTAAACATCTCAAGGTTGCGCACGATAGGAAAGTAGAGTATCCTTGTCATCTGTGCAATGCTGTCTTCTCAATGTGCAATCAAAGAACTAAGCATATACAACAAGTTCACATACGGCATAAGCAGTTTTTCTGCGCGCTGTGTCCATACCAATTTGTCACGGCGGCACAACTTAGGAATCACATGGTGAAACATATAGGGGAGAGAAAGTACCAATGTCAGGTCTGCAAGAAATCATACGCGAGAACGAAGACGCTAAGGGAACATATGCGTATACATAATAATGATAAGCGGTTCGTTTGCGAGTTTTGTAACAACGCATACGTGCAGAAATGTAGTCTTCAGAGTCATATGAGGACGCACCATCCTAACGCTGAGCCGCTAAAGAAACTCAGATTGCctaatAAAGGTGAAGAGGTCGTTCAGGTCAAACAAGAATTTGCTGACACAGAGGATATTAACGCTGCGTCCGCAGCCGCCAAACGAGAGGAGGGTGAACGCAGGCGGACCAACTTTAGAAATAATATATCTACTATCATAGACACGACCACAGTATACCCCTTTAAATATAGAAGAGGGATGTACCTCTGCTACTACTGCAAACATACATTCCTGGAACCCGAAAAGCTCCGACAACACAACCGTCACTACCATTCCGAGTCTAAAGTATTGCCTAAACCCAGAAAATATGAACCGGTCAAAATGGATTTCGCGACAGCTTTATGCAAACTTTGCTTCACTGAAATCCGCGACTACGCCATGATGAAAACTCATCTGATTGAACACGGTAAAGAGATAGACACGACTTACGGTGACAGTGTTCTTCCCTACAAATTAAGTAAAGATGAACACGTCTGTCAGGTATGCGGGAAGATATACGAGATGTTTTTAAGCCTACATAAACATATGAACGATCATTACGAGCATTATATTTGCGAGAAATGCGGGAAAAGGTTCGCGACATCCCAGCGAATGCTTAACCACACCCGCACGCACGAGCGCGGCGTGTTTCCGTGTAAACAGTGCGATCAGACCTTCCCGTCGTACGCACCTCTGTACACTCACGTCGCAAAAGTACACAGATCCAATAAGAGATACAAATGCCCCATATGTAACGAGAAATTCGTCTCTTACAAACAGAGGCTAAAGCATCTGCATACAGTTCACGAGCAGAAAACGCCCGTTTTCCCTTGTCCTTCTTGTGACCGTGTCTTTGATTTGTGCAGCAAAAGAACTGCTCATATCAGGTTTCAACACCTCCAAGAACGGAATCACGTGTGCAGCGTCTGTGGTATGAAGTTCTTTAGTAATTACGAACTTCAAGAGCACACTATCAAACATGGCGGCGAGCGGATCTACCAGTGTGATGTTTGCAAGAAGGCTTACGCGAGAATAAAAACGCTGCGGGAACACATGCGGATCCATAATAATGACAGGCGGTACACATGTCCCGTGTGTGGGCAGAGTTTTATACAGAACTGTAGCATGAAGCAGCATATTAGGGTGCATCACCCTACGCAAATGAAAGATGTATTTTAA
Protein Sequence: MFPNEQWRRSQTEHDTVIKVEPSDIQIENLLREKPRYQRSARAEARFATKRNATAILECWSVNPFRWKRNQFKCAYCEASFTDCALLRLHIGTCSSQHSVKDIYSKFKEMSLINIDVTEAVCRLCALPYSDVKQMREHVIEHGYDFEINQPDGVLPFFLNKESWRCLICQEKFNNFLKLYEHMNIHYQHYICPTCGKGYMTAPRLRKHSEVHITGTFPCNECPKIFRMRAARDYHKAHAHAKAPRYECPQCNMRFDGYYDRMNHLNEAHSEKEVLYSCPHCELSFKTSGKRALHVRSVHFPPQRDFRCSSCEWSFKTAYELRRHKVKHSGERNFHCDVCDKSFPRNRALRTHLKTHDDLACKWCGALFKQRVQLVTHMREIHSDVRSASADAEAKVGVRRVRQLKENVSARQMRRRRRANNELPEESEKRISKTMMRRNAMMLLQCSTAWAFRWFHSAFYCSYWSIDLNLKWKPKRKYNDHRDNAAIIIECSNVCPFRWKRGAFTCAFCPISFGDFSGVRDHALEHPNRVEAMRLARPLDNVKVEISGLRCELCLELIKDVETLKEHLLEIHNKPISKDHAIGVTPFLIKGKDFVCTHCKEQFELFSKLNTHMNQHYPNNICFQCGKAFAAAHRLKAHLVIHEASNSLQYKCSKCDDVFTTRALRNSHMALAHGPEYRYRCPYCNDSFLRYADRAKHLKVAHDRKVEYPCHLCNAVFSMCNQRTKHIQQVHIRHKQFFCALCPYQFVTAAQLRNHMVKHIGERKYQCQVCKKSYARTKTLREHMRIHNNDKRFVCEFCNNAYVQKCSLQSHMRTHHPNAEPLKKLRLPNKGEEVVQVKQEFADTEDINAASAAAKREEGERRRTNFRNNISTIIDTTTVYPFKYRRGMYLCYYCKHTFLEPEKLRQHNRHYHSESKVLPKPRKYEPVKMDFATALCKLCFTEIRDYAMMKTHLIEHGKEIDTTYGDSVLPYKLSKDEHVCQVCGKIYEMFLSLHKHMNDHYEHYICEKCGKRFATSQRMLNHTRTHERGVFPCKQCDQTFPSYAPLYTHVAKVHRSNKRYKCPICNEKFVSYKQRLKHLHTVHEQKTPVFPCPSCDRVFDLCSKRTAHIRFQHLQERNHVCSVCGMKFFSNYELQEHTIKHGGERIYQCDVCKKAYARIKTLREHMRIHNNDRRYTCPVCGQSFIQNCSMKQHIRVHHPTQMKDVF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00411689; iTF_00654504;
90% Identity: iTF_00411689;
80% Identity: -