Efoe036304.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epiblema foenella
Gene Symbol
-
Assembly
GCA_963556455.1
Location
OY747119.1:7785880-7793118[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 0.0017 0.14 13.9 0.5 1 22 70 91 70 91 0.95
2 26 0.23 18 7.2 0.4 2 23 163 184 162 184 0.97
3 26 0.0039 0.31 12.8 0.1 1 23 188 210 188 210 0.96
4 26 0.28 22 6.9 0.4 1 15 215 229 215 238 0.78
5 26 0.018 1.4 10.7 0.9 1 23 244 267 244 267 0.95
6 26 0.00022 0.018 16.7 1.0 1 23 274 297 274 297 0.98
7 26 0.00012 0.0099 17.5 1.8 1 23 304 326 304 326 0.96
8 26 3.4e-06 0.00027 22.4 3.0 1 23 332 354 332 354 0.98
9 26 0.0018 0.15 13.8 0.4 3 23 359 380 359 380 0.97
10 26 0.45 36 6.3 0.2 1 17 463 479 463 480 0.87
11 26 0.27 22 7.0 0.1 1 23 519 541 519 541 0.94
12 26 0.0029 0.23 13.2 5.3 1 23 609 631 609 631 0.97
13 26 0.0062 0.49 12.1 0.3 3 23 637 657 636 657 0.95
14 26 0.00035 0.028 16.1 0.5 1 23 665 688 665 688 0.95
15 26 0.21 17 7.3 0.4 1 23 694 717 694 717 0.95
16 26 0.23 19 7.2 2.5 1 23 723 746 723 746 0.96
17 26 0.0012 0.096 14.4 0.1 1 20 752 771 752 773 0.95
18 26 2.1 1.7e+02 4.2 2.8 1 23 824 847 824 847 0.94
19 26 0.013 1.1 11.1 3.1 1 23 913 935 913 935 0.96
20 26 8.9e-05 0.0071 17.9 1.5 1 23 939 961 939 961 0.98
21 26 0.008 0.64 11.8 0.1 1 23 966 989 966 989 0.95
22 26 0.0015 0.12 14.1 2.7 1 23 995 1018 995 1018 0.98
23 26 0.025 2 10.2 1.6 1 23 1025 1048 1025 1048 0.95
24 26 0.00047 0.037 15.7 1.5 1 23 1054 1076 1054 1076 0.97
25 26 1.2e-05 0.00092 20.7 0.5 1 23 1082 1104 1082 1104 0.99
26 26 9.6e-06 0.00076 21.0 3.0 1 23 1110 1132 1110 1133 0.96

Sequence Information

Coding Sequence
ATGATTCTTGCTATACgACCCAGCCAAAGCGAACACGAAACTGTGATAAAGCTAGAGCCTAACGTTATACCAATAGAAAAGTTGCTCAATGACAAACCAAGATACCAGCGCAGCGCTCGAGCCGAGGCTAGGTGCGCCACGAAGAAAAATGCTACAGCCATACTCGAGTGCTGGGCCATGAGCCCCTTCCGGTGGAAGCGGAATCAATTCAAATGCGCCTACTGCGAAGCCAGTTTCACAGACTGCGCGCTACTGCGGCTTCATATAAGCACATGCTCACCGCAACATAGCGTTAAAGATATCTACAGCAAGTTTAAAGAGATGTCTCTCATCAACGTCGACGTGACCGAGGCAGTATGCCGTCTCTGCGCGCTGCCATACAGCGACGTGAAACAGATGCGAGATCACGTTATCGAACATGGATATGATTACGAAACAAACCAGCCTGATGGTGTTCTACCTTTTTTCCTTAATAAGGAATCCTGGAAATGCGTAATTTGCCAAGACACCTTTAACAACTTCTTAAAACTGTACGAACACATGAATATACATTATCAACATTACATTTGCCCCACATGTGGGAAGGGATATATGACTGCACCTAGACTAAGGAAGCATTCAGAAGTTCACATCACTGGAACGTTTCCATGCAATGAATGCCCCAAGATATTCAGAATGCGTGCTGCTAGGGACTATCACAAAGCACACGCTCACGCCAAAGCACCCAGATACGAATGTCCTCATTGTAATATGCGCTTTGACGGATACTACGACAGAATGAACCATCTCAATGAAGCCCACAGTGAGAAAGAAGTGTCATATCGTTGTCCGCACTGCGAGATTTCCTTTAAAACTTCAGGAAAGCGAGCCATTCATGTCCGAACGGTGCATTTTCCGCCGCAACGTGATTTCAGATGTTCAAGTTGCGAATGGAGTTTCAAAACTGCTTACGAACTAAAAAGGCACAAGGTGAAACATTCTGGAGAAAGAAATTTTCACTGTAATGTGTGTGATAAATCGTTTCCAAGAAATAGAGCTTTGAGAACTCATTTGAAAACTCACGATGACATGGGCTGTAAGTGGTGCGGGGCTTTGTTCAAGCAGCGAGTGCAATTATTGACTCACATGAGGGAAATGCATTCGGATATGTGCGAACTTGTTAATATAGgtTCCGCTAGTGCGGACGCGGAGGGGAAAGTAGGAGTTAGACGTGTTAGGAAGTTAAAGGAGAACGTAAGCGCTCGTCAGATGCGTCGGCGCCGCCGCGCGAACAACGAGTTGCCGGAGGAGTCCGAGAAACGCATTTCCAAAACTATGATGCGAAGGAACGCTATGACTCTTCTAGAATGTTCCACCGCTTGGGCTTTCCGCTGGTTCCACAGCGCTTTTTACTGCTCGTACTGCGATGCTAAGTTTGTTGACCCCGGACCACTGCggtCCATCGACCACAAACTTAAATGGAAACCGAAGCGCAAGTATAACGATCACAGAGACAATGCGGCTATTATTATAGAGTGTTCCAACGTGTGCCCGTTCAGGTGGAAACGAGGGACGTTCACTTGTGCCTTCTGTCCCATGTCCTTCGGGGACTTCAGCGGCGTCAGAGATCACGCACTCGAGCACCCAAACAGGGTCGAGGCGATGCGACTAGCACGCCCGTTAGATAACGTCAAAGTAGAGATCAGCGGGCTCCGCTGCGAGCTCTGTCTAGAACTCATTAAAGACGTCGAAACACTAAAGGAACACTTACTTCAAATCCACGATAAAGCTATTAGCAAAGATCACGCCATCGGTGTCACTCCCTTCCTAATAGAAGGAAAGGAATTTATGTGCACTCACTGTGGAGAACGCTTTGAGCTGTTTTCGAAATTAAATACGCATATGAATCACCATTATCCAAATAATATATGCTTCCAATGTGGCAAAGCGTTCTCTGCCGCACATAGACTCAAAGCTCACTTAGTTATACATGAAGCTTCCAATAGTATACAGTATAAATGTTCTAAATGCAACGAAGTGTTCACGACGCGGGCTTTAAAGAACAGTCACATGGCCTTAGCACACGGGCCGGAGTACCGCTATCGATGTCCATATTGCAACGACTCGTTCTTGAGATACGCAGATAGGGCTAAACATCTCAAAGTTGCACACGATAGGAAAATAGAGTATCCCTGTCATCTATGTACAGCCGTCTTCGCTATGTGTAATCAGAGAACTAAACATATACAACAAGTACACATAAGACACAAGCAGTTCTCCTGCGGATTGTGCCCTTACCAATTCGTGACGGCTGCCCAACTTAGGAATCATATGGTCAGACAAGTGTTGGCCGAGGCTGAGGATATTAACGCTGCATCCGCAGCCATCAAACGAGAGGAGGGAGAACGGAGACGAACCAACTTTAGGAATAATATCTCTACTATCATAGACTCAACTACAGTATACCCCTTCAAATATAGAAGAGGAATGTACCTCTGTTATTATTGCAAACACACGTTCCTAGAACCCGAAAAGCTGCGACAGCACAACCGTATCTACCATTCCGAATCAAAAGTATTGCCGAAACCCAGAAAGTATGAACCGATTAAAATGGACTTCTCGACTGCTTTATGCAAGCTTTGCTTAACTGAAATCCGCGACTATGCCATGATGAAAACACATTTGATCGAACACGGCAAAGAACTAGACACCACTTTCGGGGACAGCGTACTTCCTTACAAGTTGAGCAGAGACGAGCACGTCTGTCAAGTTTGTGGGAAGACATACGAGATGTTTTTAAGCTTGCATAAACATATGAACGACCACTATGAGCATTATATTTGCGAAAAATGTGGGAAAAGATTCGCGACATCCCAACGTATGCTAAACCACACTCGGACCCATGAACGCGGTGTATTTCCATGCAAGCAATGCGACCAGACATTCCCATCCTACGCGCCTTTATACACTCACGTTGCAAAAGTTCATAGATTTAATAAGAGATACAAATGTCCCATTTGTAACGAAAAATTTGTATCTTACAAACAGCGACTAAAGCATCTGCATACAGTCCATGAGCAGAAAACACCCGTTTTCCCTTGTCCCTCGTGTGACCGAGTTTTTGATCTGTGCAGTAAGAGAACGGCACATATCAGATTCCAACACTTGCAGGAACGCAACCATGTGTGCAGTGTGTGTGGCATGAAGTTCTTTAGTAATTATGAGCTTCAAGAACACACGATCAAGCATGGTGGTGAAAGGATATACCAATGCGACGTGTGCAAGAAGGCGTACGCTAGAATAAAGACGCTCAGGGAACACATGCGGATCCATAACAACGACAGGCGGTATACTTGCCCTGTGTGCGGACAAAGTTTTATTCAGAACTGTAGCATGAAACAGCATATTAGAGTGCATCATCCCACGCATTTGAAGGATGTATTTTAA
Protein Sequence
MILAIRPSQSEHETVIKLEPNVIPIEKLLNDKPRYQRSARAEARCATKKNATAILECWAMSPFRWKRNQFKCAYCEASFTDCALLRLHISTCSPQHSVKDIYSKFKEMSLINVDVTEAVCRLCALPYSDVKQMRDHVIEHGYDYETNQPDGVLPFFLNKESWKCVICQDTFNNFLKLYEHMNIHYQHYICPTCGKGYMTAPRLRKHSEVHITGTFPCNECPKIFRMRAARDYHKAHAHAKAPRYECPHCNMRFDGYYDRMNHLNEAHSEKEVSYRCPHCEISFKTSGKRAIHVRTVHFPPQRDFRCSSCEWSFKTAYELKRHKVKHSGERNFHCNVCDKSFPRNRALRTHLKTHDDMGCKWCGALFKQRVQLLTHMREMHSDMCELVNIGSASADAEGKVGVRRVRKLKENVSARQMRRRRRANNELPEESEKRISKTMMRRNAMTLLECSTAWAFRWFHSAFYCSYCDAKFVDPGPLRSIDHKLKWKPKRKYNDHRDNAAIIIECSNVCPFRWKRGTFTCAFCPMSFGDFSGVRDHALEHPNRVEAMRLARPLDNVKVEISGLRCELCLELIKDVETLKEHLLQIHDKAISKDHAIGVTPFLIEGKEFMCTHCGERFELFSKLNTHMNHHYPNNICFQCGKAFSAAHRLKAHLVIHEASNSIQYKCSKCNEVFTTRALKNSHMALAHGPEYRYRCPYCNDSFLRYADRAKHLKVAHDRKIEYPCHLCTAVFAMCNQRTKHIQQVHIRHKQFSCGLCPYQFVTAAQLRNHMVRQVLAEAEDINAASAAIKREEGERRRTNFRNNISTIIDSTTVYPFKYRRGMYLCYYCKHTFLEPEKLRQHNRIYHSESKVLPKPRKYEPIKMDFSTALCKLCLTEIRDYAMMKTHLIEHGKELDTTFGDSVLPYKLSRDEHVCQVCGKTYEMFLSLHKHMNDHYEHYICEKCGKRFATSQRMLNHTRTHERGVFPCKQCDQTFPSYAPLYTHVAKVHRFNKRYKCPICNEKFVSYKQRLKHLHTVHEQKTPVFPCPSCDRVFDLCSKRTAHIRFQHLQERNHVCSVCGMKFFSNYELQEHTIKHGGERIYQCDVCKKAYARIKTLREHMRIHNNDRRYTCPVCGQSFIQNCSMKQHIRVHHPTHLKDVF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00773072;
90% Identity
-
80% Identity
-