Hdys005649.1
Basic Information
- Insect
- Hecatera dysodea
- Gene Symbol
- -
- Assembly
- GCA_905332915.1
- Location
- HG995290.1:3567546-3568407[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-07 6.6e-05 23.6 0.0 11 39 34 61 29 65 0.86
Sequence Information
- Coding Sequence
- ATGATAACCGTTGCTTTTTTCGTTCTAGATGCCCAGACAACGTATAAAAAAACTTCAAGAGGCGAGTGTGATATAACTCAGTACGAAAATGCGTATGAAGAAGTCAAAAAAGGGACTTCTTTACGAAAAGCTGCAGAGATGTACGGAGTTCACCATTCTTCTCTTCTGCGATACAAGGAAAAAAGAGATGCAGCGATCGAAGAAGGTAACCAGGCTGATGTTAGTATGGGGTATGTAGCCCACAACCGAGTATTTACCCCTGACCAGGAATttaaactgtcaaaatatttgaTCCGCTGTGCGGATATTTACTTTGGTCAATCTGTCAAGGAAGTTGCCGGAGAAGAGTGGTTTCGCTCTTTTATGAGAAGAAATGTGGAATTGTCGGTGCGCACAGCTCAGGCAACCAGTCTCTCCAGGGCAACAAGTTTTAACAAGACCAACGTGGATGCTTTTTACGATAACTTGCAAGTTGTCCTTGACCGTGACAACTTTGAACCACaagacatctacaatgttgACGAGACGGGCGTAACAACTGTACAAAAGCCCGACAGAGTTGTGGCAAAGCGAGGAACACGACTGGTAGGAGCTGTCACCTCTGCCGAACGTGGGACGTTAGTCACACTAGCCTTTGCGGCAAACGCGTTGGGCAATGCGATCCCCCAATGTTCGTGTTTCCAAGGGTTCGATACCAAGATCATTTTATTAGAGATGGTCCAGTGGGTTCTTTTGGAACTGCCAACCCATCAGGCTGGATGCAAGACGAACTATTTGTTGAGTTTCTGA
- Protein Sequence
- MITVAFFVLDAQTTYKKTSRGECDITQYENAYEEVKKGTSLRKAAEMYGVHHSSLLRYKEKRDAAIEEGNQADVSMGYVAHNRVFTPDQEFKLSKYLIRCADIYFGQSVKEVAGEEWFRSFMRRNVELSVRTAQATSLSRATSFNKTNVDAFYDNLQVVLDRDNFEPQDIYNVDETGVTTVQKPDRVVAKRGTRLVGAVTSAERGTLVTLAFAANALGNAIPQCSCFQGFDTKIILLEMVQWVLLELPTHQAGCKTNYLLSF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00951756; iTF_01031083; iTF_00374004; iTF_01062740; iTF_01264507; iTF_01264508; iTF_01117138;
- 90% Identity
- -
- 80% Identity
- -