Cpyr011444.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- -
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010000370.1:229857-230891[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-07 4.2e-05 24.5 0.0 8 40 22 53 20 56 0.87
Sequence Information
- Coding Sequence
- ATGCCCAGACAACGTACCAAAAAAACATCAAGAGGCGAGTGTGATATAACTCGGTACGAAAATGCGTGTGAAGAAGTCAAAAAAGGGACTTCTTTACGAAAAGCTGCAGAGATGTACGGAGTTCACCATTCTTCTCTTCTGCGATACAAGAAAAAAAGAGATGCAGCGATCGAAGAAGGTAACCAGGCTTATGTTAGTATGGGGTATGTAGCCCACAACCGAGTATTTACCCCTGACCAGGaatttaaactgtcaaaatattTGATGCGCTGTGCGAATATTTACTTTGGTCTATCTGTCAAGGAAGTAAGAAAATTAGCATTCCAGCTCGCtgtcaaatataatttaaacacaCCTCCTACGTGGAACGAAAATCAGGTTGCCGGAGAAGAGTGGTTTCGCTCTTTTATGAGAAGAAATGTGGAATTGTCGGTGCGCACAGCTCAGGCAACCAGTCTCTCCAGGGCAACAAGTATTAACAAGACCAACGTGGATGCTTTTTACGATGACTTGCAAGTTTTCCTTGACCATGACCACTATGAACCACAAGACATCTACAATGTTGACGAGACAGGTGTCACAACTTTACAAAAGCCCGACAGAGTTGTGGCAAAGCGTGGAACGCGACAGGTAGGAGCTGTCACCTCCGCCGAACGTGGGACTTTAGTCACACTAGCCTTTGCGGCAAACGCGTTGGGCAATGCGATTCCCCCAATGTTCGTGTTTCCAAGGGTTCGATACCAAGATCATTTTATTAGAGATGGTCCAGTGGGTTCTATTGGAACTGCCAACCCATCAGGCTGGATGCAAGACGAACTATTTGTTGAGTTTCTGAAACATTTCAAGAAACATTCAAATGCCTCTACATCCCATAAAGTACTGCTTGTTCTAGACAATCATTCTTCACACGTCCACATAAATTCTCTGGATTTCTGCAAAGAAAACGGTATCGTTTTACTTTCATTTCCACCCCACTGCTCGCACAAGTTGCAGCCTTTAGATCGATCTGTTTACGGCCCGTTAAAAAAGCTATAA
- Protein Sequence
- MPRQRTKKTSRGECDITRYENACEEVKKGTSLRKAAEMYGVHHSSLLRYKKKRDAAIEEGNQAYVSMGYVAHNRVFTPDQEFKLSKYLMRCANIYFGLSVKEVRKLAFQLAVKYNLNTPPTWNENQVAGEEWFRSFMRRNVELSVRTAQATSLSRATSINKTNVDAFYDDLQVFLDHDHYEPQDIYNVDETGVTTLQKPDRVVAKRGTRQVGAVTSAERGTLVTLAFAANALGNAIPPMFVFPRVRYQDHFIRDGPVGSIGTANPSGWMQDELFVEFLKHFKKHSNASTSHKVLLVLDNHSSHVHINSLDFCKENGIVLLSFPPHCSHKLQPLDRSVYGPLKKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00771856;
- 90% Identity
- iTF_01031083;
- 80% Identity
- -