Basic Information

Insect: Harpagoxenus sublaevis
Gene Symbol: -
Assembly: GCA_030770355.1
Location: JASTWR010000012.1:1875844-1880139[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4e-06 0.00072 21.2 3.1 1 23 406 428 406 428 0.98

2 16 5.5e-07 9.9e-05 23.9 1.0 1 23 434 457 434 457 0.96

3 16 1e-05 0.0018 20.0 0.9 1 23 463 485 463 485 0.99

4 16 2.5e-05 0.0046 18.7 0.9 1 23 491 513 491 513 0.97

5 16 3.1e-05 0.0056 18.4 2.7 1 23 519 541 519 541 0.96

6 16 5.7e-05 0.01 17.6 0.3 3 23 549 569 547 569 0.97

7 16 3.1e-06 0.00056 21.6 1.3 1 23 575 598 575 598 0.96

8 16 0.00015 0.027 16.3 7.1 1 21 699 719 699 723 0.93

9 16 0.053 9.6 8.3 0.2 1 23 778 801 778 801 0.93

10 16 0.00018 0.032 16.1 1.7 1 23 831 853 831 853 0.98

11 16 1.9e-05 0.0034 19.1 1.9 1 23 859 882 859 882 0.96

12 16 2.6e-05 0.0047 18.7 0.2 2 23 889 910 888 910 0.97

13 16 1.9e-07 3.5e-05 25.4 1.1 1 23 916 938 916 938 0.99

14 16 4.6e-05 0.0083 17.9 2.2 1 23 944 966 944 966 0.98

15 16 2.7e-05 0.005 18.6 1.6 1 23 972 994 972 994 0.96

16 16 0.00049 0.088 14.7 1.9 2 23 1001 1023 1000 1023 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4e-06	0.00072	21.2	3.1	1	23	406	428	406	428	0.98
2	16	5.5e-07	9.9e-05	23.9	1.0	1	23	434	457	434	457	0.96
3	16	1e-05	0.0018	20.0	0.9	1	23	463	485	463	485	0.99
4	16	2.5e-05	0.0046	18.7	0.9	1	23	491	513	491	513	0.97
5	16	3.1e-05	0.0056	18.4	2.7	1	23	519	541	519	541	0.96
6	16	5.7e-05	0.01	17.6	0.3	3	23	549	569	547	569	0.97
7	16	3.1e-06	0.00056	21.6	1.3	1	23	575	598	575	598	0.96
8	16	0.00015	0.027	16.3	7.1	1	21	699	719	699	723	0.93
9	16	0.053	9.6	8.3	0.2	1	23	778	801	778	801	0.93
10	16	0.00018	0.032	16.1	1.7	1	23	831	853	831	853	0.98
11	16	1.9e-05	0.0034	19.1	1.9	1	23	859	882	859	882	0.96
12	16	2.6e-05	0.0047	18.7	0.2	2	23	889	910	888	910	0.97
13	16	1.9e-07	3.5e-05	25.4	1.1	1	23	916	938	916	938	0.99
14	16	4.6e-05	0.0083	17.9	2.2	1	23	944	966	944	966	0.98
15	16	2.7e-05	0.005	18.6	1.6	1	23	972	994	972	994	0.96
16	16	0.00049	0.088	14.7	1.9	2	23	1001	1023	1000	1023	0.94

Sequence Information

Coding Sequence: ATGGACTCGATGTCGCCGGAAATGGAGTCATCCGACGAGGACATTATGCTGATCGAAACCGTGAAGGGTATAGTGACGCATGAAGAGCGCAACGAGTCGGAGGGAATGGAGGGAACCGACGAGGATTTCTTTCTGATATCCCAGGACCAGCCAGTGCAGTATCCCGAGGAGCACGTCGTGGAAACGGTGTCCAGGACGGAGGTGACATTAGCATGGATGCACCTCTGCAGGATATGCGCTAACGCGAACGATCGCATGGTACCCATCTTCGAGGGCGGCGGAGCGGAGCATGACTTGTCCAGCAAAATACTCAAGTACCTGCCGATACACGTATCCGAAAGCGACACTCTACCGTTGCAACTGTGCGAGAATTGTGCAAACATCCTATTAACCTGGCACGAGTTGAGCGAGGGATGCTTAAGGGCGGAGAGAAAGCTGCTGGAAATGCAGGATATGGAACTGCGAAATAAGCAACAGTATTACAACCCTACTCCTTTGGATAATTTAGAAGTTACTACGCCGATGCTTACGACAGCCAGCACGATCATTGCGTCTAATATTACAAACTCACTGCCAAATCATCAGGATAATAACAAAGATGAAACGCGTgatacagaaaaaattaataaatccaaCAGCCCCGGGGTGGTTGACTTTAACGATTTACCTAGAAAACCGAGCGGCTGTGATAACCGAAACTCGAAATCGCAATCGTCCGCTGCGTCGTGCCGCGCAATCACGAAACCTGGAGTCAAGTTTCGGCTATTTTGCAGGTCGTGCGGCGTCCGGACACCGTTTAGAGTGTCCCCGGACACGCAGAAAACATTTTGGAAGCCATACAGGAAACGGTGCCAGTCGAGAATGTGCAACCTGACAAAGCCGAGCGCGACGTCCGAGGACTCCGACTCGGTCTGGATCGCCGTCATGGACACGGAGCACGATCAACTGTCTACCGTGTCCGAGCAGCTGGAGAGTAACGATCCGTTGTCCGTCGAAGTGAAGGAAGAATATGTCGCGACGCAGCGCTCTATAAAAAATTCCGACCGCGACGAGGACAGCAACGAGCTTCGGACGATCACTGTCGCACATGAGAAGAAGAAAAGCGAGAGAGATCAGATCTCTAATGACGATTCGATACATTTGGTACTTGACGACGAAAAGAACGGTAAAGAACTGTGCGAGATTCTTGAAAACGTGTCGCACAGAGAGGAGACGTTCCGGTGCGCCGAGTGCGGTAGGTGTTTCAAGCTGAAGGACTCGTATTTGCGACACATGAGGATTCATAAGGACGAGCGACCGTTTACCTGCCACGTGTGCGGCAAACAGTTCCGCGACTCCGGCGGACTGACCAGGCATATCAAGGACGTGCACGCGAAGCTGAAGAACTTCACGTGCGACTTGTGCGGCAAATCGTTCGCGTCCAAGGCGACGCGGGAGGATCACCGGCGCACCCACACCGGCGAACGACCGTACGTCTGCGACTCATGCGGGAAGACCTTCAAATCTAAGGCGTCCTTGTACATCCACAGCAAGCTGCACACCGATGTGTTCCCGCACGCGTGCTCGTACTGTAACAAACGGTTTCGCCGACGGCAGGAGCTGCTGGCACACGTAACCACGCACACCGGCGAGAAGAATTACGGGTGCGACGTGTGCGACAGGAAGTTCCGGGTCAAGTCTGAACTTGCGCGGCACAAGCTCATCCACTCTGGGAACAAGCCGTTCGCCTGCGGCAAGTGCGGTCGCGCTTTCCGGCAGAAGCGCTACCTGAACAATCATATAAAGAGCCGGCACAAGGAATCTCTGCGAGCGTGCGAGCTGGCAGAGGAGAGATCTCTCGCGACATACCGCTCCTCGCGTAGCGCTACACTGTGGACGAATAACGCCACGATAAAGTATGAAAGCAATCCGGCGAGAAGCATGACGCTGATTGCAGAGAACGCTAAAGGAATTTCAAAAAAAGAGACACGCGATTCGTCGAATAACTGGACTAACGCAGTAAAATACGACGAAAAAATAGACTCGAACGACTCAAGAcatcaagaaaaaaataaatcggCAATTCCACAGTCAATGAATAAATCTGAAAAGAACTACACTTGCGATAACTGCCGACGTGTTTTCAAAAGAAAGCACCATCTAATACGCCATATGACAGCCTGCAAACATCACGATTCAGTCGACGAAGAGGATTTGTCAAGAACGCGCACTAAAGtgacagaaaagaaaaagaagacaaCACGTGACAATATGATAGAAGAAAAAGACCGGCTGGTGGACACAAGGGACGACGAAGAACGTTGCCTTTCATTGGGAAAACGATCCAGAATTTATCCGTGCGGCTATTGCGAGCACTCTGCGGAGAAGAGGAAGCTGTTGAAAGCCCATCTGGCGGAGGCGCATCCCAAGGTCGCGAAGAGGAATCGGAAGTCCTTTGTAGCCACGGAGACAGTGCTGCGTGCCCGAATGGAGCATGACGGTAAAGTATACTACCATTGTAATGAGTGCGGCAAGAACTTAAATTCGCCGTACACCTTCTACTGGCACCTGCGCATCCACACGGGCGAGCGGTTATTTACCTGCCACCTCTGCGGCAAGCGATTTCGCGTGAATCAGGGTCTGGCGCGACACCTGAAGGAGACCCACGCCGGTATCAAGAACGTGCCATGCGATCTGTGCGGCCGCATGTTCTCGACGCGACGCAACGTCGAGGACCACAGGCGCATCCACACGGGCGAGCGGCCATACGTCTGCAACGTCTGCGGGAAAACGTTCAAGCAAAAGGCCTCTCTGTTCGTGCACAATCGCACGCACACAGACGTATTCCCGTTCAAGTGCAGCCATTGCGGCCAGACCTTCCGCACGCGACCGCCGCTGATGTTGCACATTACCAAGCATACCGGCGAGAAGCCGCACGCGTGCGACGTGTGCGGCCGTCGCTTCCGCATCAAGTACGAGCTGAAGCGGCACCGACTGATCCATTCCGACGAGAAACCCTGGCGCTGCACCGACTGCAGCCTCTCGTTCCGCCAGAAGCGCTACTTAGTTAATCATAAGAAACTCAATCACGAGCCGCCACGCAGCTCGGCCGTCCCCCAAGTAACGGGCTGA
Protein Sequence: MDSMSPEMESSDEDIMLIETVKGIVTHEERNESEGMEGTDEDFFLISQDQPVQYPEEHVVETVSRTEVTLAWMHLCRICANANDRMVPIFEGGGAEHDLSSKILKYLPIHVSESDTLPLQLCENCANILLTWHELSEGCLRAERKLLEMQDMELRNKQQYYNPTPLDNLEVTTPMLTTASTIIASNITNSLPNHQDNNKDETRDTEKINKSNSPGVVDFNDLPRKPSGCDNRNSKSQSSAASCRAITKPGVKFRLFCRSCGVRTPFRVSPDTQKTFWKPYRKRCQSRMCNLTKPSATSEDSDSVWIAVMDTEHDQLSTVSEQLESNDPLSVEVKEEYVATQRSIKNSDRDEDSNELRTITVAHEKKKSERDQISNDDSIHLVLDDEKNGKELCEILENVSHREETFRCAECGRCFKLKDSYLRHMRIHKDERPFTCHVCGKQFRDSGGLTRHIKDVHAKLKNFTCDLCGKSFASKATREDHRRTHTGERPYVCDSCGKTFKSKASLYIHSKLHTDVFPHACSYCNKRFRRRQELLAHVTTHTGEKNYGCDVCDRKFRVKSELARHKLIHSGNKPFACGKCGRAFRQKRYLNNHIKSRHKESLRACELAEERSLATYRSSRSATLWTNNATIKYESNPARSMTLIAENAKGISKKETRDSSNNWTNAVKYDEKIDSNDSRHQEKNKSAIPQSMNKSEKNYTCDNCRRVFKRKHHLIRHMTACKHHDSVDEEDLSRTRTKVTEKKKKTTRDNMIEEKDRLVDTRDDEERCLSLGKRSRIYPCGYCEHSAEKRKLLKAHLAEAHPKVAKRNRKSFVATETVLRARMEHDGKVYYHCNECGKNLNSPYTFYWHLRIHTGERLFTCHLCGKRFRVNQGLARHLKETHAGIKNVPCDLCGRMFSTRRNVEDHRRIHTGERPYVCNVCGKTFKQKASLFVHNRTHTDVFPFKCSHCGQTFRTRPPLMLHITKHTGEKPHACDVCGRRFRIKYELKRHRLIHSDEKPWRCTDCSLSFRQKRYLVNHKKLNHEPPRSSAVPQVTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01409378;
90% Identity: iTF_00885320;
80% Identity: -