Hsub018912.1
Basic Information
- Insect
- Harpagoxenus sublaevis
- Gene Symbol
- retn
- Assembly
- GCA_030770355.1
- Location
- JASTWR010000179.1:221194-230316[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-21 3.6e-17 63.9 0.0 9 89 56 134 38 134 0.91 2 2 10 4.8e+04 -3.9 0.0 28 45 366 384 356 388 0.73
Sequence Information
- Coding Sequence
- ATGCACCCTAAGGAAGATCGTAAAAGACTGCGGCACTCGCGTGATTGTTGCGAATTCGTTATTGCTCTTGTTAACGCCCCACGCTGGATATCTCTGGACAAACCTCGTAAAATCCAGCGGTTTTACGCTAGTCGTACTTTAAGACGATCGCAAAATCTCCCTCGGTTGATCACGCCATGTGTAAAGGATGgaaCGCCCATCAGCCGACTTCCTATCATGGCAAAATCCGTATTGGATCTCTTCGAGCTTTACAAGTTAGTGGTAAATCGAGGTGGATTGGTCGAGGTAATCAACAAGAAGCTGTGGCAGGAAATAATCAAAGGTCTCAGGCTGCCAGCGAGCATCACTTCCGCCGCGTTTACTTTGCGAACTCAGTATATGAAGTATCTGTATCCatatgagagagagaaggaagcgCTGTCGACCCAAGAACAACTCCAGACAGCGATCGAGACAAATCGCCGTGAGAGCCGCAGGAACAATTACAATTACGGTAACAACGACAATTTAGTACCACGGAGTCAGCACAATTCGCTGCCGCAAAATCCGATGCCTTTGCCGCTCTCCATCGCCCAAATGGCCGCGGTTGCGGGTGAATCGCAGCATCACGTCGTGAATGGACATCCGCACGTTCCGCAACACCATCCGCACGTTCCGCAACACCATCCCCAACTGACAAATAGTCAAGTTTCAGACTTGGTGAGGATACTGTCAAGAGACAGAAGCACCGCAGTTCCCAGTAATCCGATGATGCAAGGTAGCATATCGACACCGCCAGCAACGGCGGAAGGATTTAGATCCATGCATCTCTGGAGTATGTACAGTCAAGGCAACAGTAATATCTATGCAGGGATGGCACAGCCAGCCTTCTCTCCATCGTCGTCCCACTCGCCATTAGCACCGGCAAATAGTCCCGAACCACAAAGAGAGGCCTTGGATCTGGCAAACTCTGGACACAGATTGGATTCGGTATCCTCTCCAAACGCTAGCAGATCCGTAAGTTCACCACCAGAGGGTGCAGAAATGAAGAGAAATCAAGAGACTGCTGAACTCTTATCTCCGTCTATTAAAAGAATGGTGTTATCTGATGAGGAAGGAAATAATATACACTCTCTGCGCATTAGACAACAGGTTAGCACACGAGaaGGAGGACGAAGAGAACTAGAAATTAGTGTAAATATTGATGGTATTTTGTATGAAGGCGTCCTGTCAGTTAAACGTAATGAGGGTAATAATGAGGGCAGTAGTACCCCGTCAAGCCCTAATAATGACAAACGGACACAAAATAACGAATCGTGA
- Protein Sequence
- MHPKEDRKRLRHSRDCCEFVIALVNAPRWISLDKPRKIQRFYASRTLRRSQNLPRLITPCVKDGTPISRLPIMAKSVLDLFELYKLVVNRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQYMKYLYPYEREKEALSTQEQLQTAIETNRRESRRNNYNYGNNDNLVPRSQHNSLPQNPMPLPLSIAQMAAVAGESQHHVVNGHPHVPQHHPHVPQHHPQLTNSQVSDLVRILSRDRSTAVPSNPMMQGSISTPPATAEGFRSMHLWSMYSQGNSNIYAGMAQPAFSPSSSHSPLAPANSPEPQREALDLANSGHRLDSVSSPNASRSVSSPPEGAEMKRNQETAELLSPSIKRMVLSDEEGNNIHSLRIRQQVSTREGGRRELEISVNIDGILYEGVLSVKRNEGNNEGSSTPSSPNNDKRTQNNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01407951;
- 90% Identity
- iTF_00884841;
- 80% Identity
- -