Hhal006270.1
Basic Information
- Insect
- Halyomorpha halys
- Gene Symbol
- stc
- Assembly
- GCA_000696795.2
- Location
- NW:778797-807226[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1 1.2e+04 -4.3 1.6 15 18 273 276 272 277 0.75 2 18 0.95 1.2e+04 -4.0 1.6 15 19 300 304 299 304 0.81 3 18 0.006 74 3.0 0.4 4 10 333 339 332 341 0.96 4 18 0.0002 2.5 7.7 20.8 4 19 347 362 345 362 0.93 5 18 0.26 3.3e+03 -2.3 0.6 5 10 387 392 387 392 0.95 6 18 0.00034 4.2 7.0 14.1 3 18 400 415 398 416 0.91 7 18 0.99 1.2e+04 -4.1 1.5 9 13 422 426 421 427 0.71 8 18 1.1e-08 0.00014 21.3 13.8 1 18 455 472 455 473 0.99 9 18 1.5e-09 1.9e-05 24.1 11.0 1 19 514 536 514 536 0.88 10 18 0.00091 11 5.6 8.4 1 11 576 586 576 587 0.96 11 18 1 1.2e+04 -4.4 1.1 4 10 591 597 591 597 0.58 12 18 3.7e-11 4.6e-07 29.2 12.3 1 18 603 620 603 621 0.97 13 18 1 1.2e+04 -4.2 1.2 6 10 650 654 649 654 0.77 14 18 1 1.2e+04 -10.1 16.6 1 19 660 678 660 678 0.75 15 18 0.33 4.1e+03 -2.6 0.2 9 13 696 700 695 701 0.79 16 18 5.1e-05 0.63 9.6 13.8 1 17 714 729 714 729 0.96 17 18 0.47 5.9e+03 -3.1 1.5 5 10 733 738 733 738 0.89 18 18 0.0017 21 4.7 16.1 1 18 745 764 745 765 0.82
Sequence Information
- Coding Sequence
- ATGTCCAACTGGGATAGGCCCCAAAGTAGTGGTAGCTCATATCAGGGATATGGTGCTTATTACAATCCTCAGTCACAGCCAGAGAATACAAATTTGTATGGGAACTTATATCAGCAGCCTTTCTACAATGGATCCTGTTATAATGGTCCACCTCAGGCATTTAGAAATGGGTACCAAGGCAATTACCAAAATCCTCCAACATCTGCTGAAGAATTTTTTAGGATCATTCAAGAACAACAAAATCAAGAAAGTCCTCATGAATATAGGGCTAGAAGTATAGACTATGACTCCCTTGGCCATGGATGCAATATTCCTACAATGGTTTTTCCATCATCTAATAGCTCaggtgGGGATCAAGTACAAcaaggtaaaagaaagatatatgaAAACAGCAAAGGGGGAGGAAGAGGTGGAGGACGATACCAGCATGGAGCCATTCCTAGACCACAGAATAATTTCAGGCGTGGTGGatacaataacattaaaaaacctGTTCAAAATCAGCCACAGAATCATTGGGCTGCGGTCCCAAATGGTGATATCATTGGTGATGATCCCAAGGTagaggaaagtaaaaattcatCAAAGCGTGGAAAAGGTTTTGCTCAAAGGAATACCAACAGATATAATGGTTACCACCAaaaagataGCGGTACAGTTAAGCGTGATAACTTCAGTAAAGATTGGCGAGCTAGGGGGAAAGCTAAAGGAAATGAGGAATCTCAGCGTGACCGTTTAACATCTCAACTCTATTCTGGTGCTCTGGAGTGCTTAGTCTGCTGTGAAAGGATGAGGCAAGCAGATCCTGTTTGGTCTTGTCCAGCTTGCCATCATGTTCTTCATCTCCGTTGCACTGTTCGTTGGGCGTCATCTTCAAGAGCAGataacgGTTGGAGATGTCCTGCTTGCCAGAATGTTACTGATGCGATACCTACAGATTACAAGTGTATGTGTGGAAAAGTGATTAATCCACAATGGgttCGAGGAGAAACTCCTCATACTTGTGGGCAAGTTTGTGGGAAAGATCGTGGTTGCCCACATTGTTGTACGCTCCTCTGCCATCCCGGTCCTTGTCCTCCATGCTCGGCAAACATTGACAGgtATTGCGGTTGTAACAGAACAAAGCAGGTTGTCCAGTGCTCTTCAAGGGTCGAGTTAACTTGTGATTCTGTTTGTGAAAAGTTGCTCAACTGTAAGGTTCATCATTGTATGAAAGGATGTCATAATGGCCCCTGTGACTCTTGTGATAACACTGTTCATCAAAGATGCCATTGTGGACAAGAGGAAAGAGACATACCTTGTGATCGTGCTGATATCGAAGATTTCTACAGCTGTGACAAGTTATGTGATAAACTACTGGCTTGTGGACAGCATAGATGTACTAAGACCTGTCACCCTGGTTCGTGTTCCACTTGTATATTGTCTCCAGATGTGGTGTTGACTTGCCCCTGTGGTAAGAAGCCATTGGCTCCTGGCTCGAGGAAATCCTGCAAAGATCCGGTACCACTTTGTGGCGCAGTTTGTGGAAAGGTCTTGGTGTGTGGTGTAGCAGGAAGGAAACATACTTGTGCGGTATTGTGCCACAGCGGCGACTGCCCACCTTGTCCTGAAACTACATCAGTCATGTGTCGGTGCGGAGCTATGGCTAAGGAAGTACCCTGTGCTGGCTTGGATTCACGCCCAGACGATGCCCGTTGTTCTAAACGATGTACAAAAaagAGAAGTTGTGGAAAACACAAATGCAACCAAGCGTGTTGCATAGAGATTGACCACTTTTGCCCCCTTCCATGCAATAAAATGTTGAGTTGTGGAAGACACCGTTGCCAGGAACTCTGCCACCGAGGCAACTGTCGACCCTGCCTTGCTGCGAGTTTTACCGAACTGAGCTGCGAGTGCGGAAAGGCTGTCCTTTATCCTCCAGTTGCTTGCGGCACTAGGCCTCCCGAGTGCAAGGCTCCTTGCTCTCGCGATCATCCGTGTGGCCATCCTCCTACTCACCATTGCCACTCTCAGAGCGAGTGTCCTCCATGTTCAGTTTTAAcaactaaatattgttttggagCTCATGagTTACGGAAAACAGTTCCTTGCCATATTGGAGAATTTTCCTGTGGACGtgcttgtaataaaaaattagactgTGGCCATTGTTGCATTAAAATCTGCCACGCAGGGCCTTGTACTCCAGAAGGAACAAGATGCACGCAGCCGTGTACTGTACCAAGACCTACTTGTGGCCACGAATGTGCTGCGCCTTGTCACCCTGGGCAGCCTTGTAATCCCCAGCCGTGTCAATCAAagGTTGAGGTTCGATGTGAATGTGGAAGAAgggttgtaaaaaaaagttgttctgAAAATAGTTGTGAGTATCAACGCTTGGCCACTGCTCAGCTTGCCTCTCAAATGGCCGATGTTCGTCTTGGAAAGACCGTTGACCTCAGATCTTCTTCCAAGCCAGTCTATAAgctTGAATGTACAGATGAATGCAAAATAGCTGAAAGAAACTTACGCCTAGCGATAGGTCTTCAAATTTCCAATCCGGATCTCTCATCAAAGCTATGTCCTAGATACTCTCAGTTCCTTATGACATGGGCAAAAAAAGATCCTAAATTTGCTCAGAACGTTCATGAGAAGCTTACAGAAGTTGTACAGTTGGCTAAAACAtcaaAGCAGAAAAGCAGAAGTTATTCTTTTCCTTCTATGAAATCTGAAAAGAGGCAGTTTATACACGAGTATAGCGAGCACTTTGGGGTTGAAAGTGTCGCTTACGATGCGGAACCTAATCGTAATGTAGTTGCTACAGCTTATAAGGATAAGtcatGGCTTCCTAGTTACTCTATTCTTGAGATGTTGGAGCGAGCAGCGGGTAAAAGAAAGGTTCCATCTCTTCTTCCGTCATTAAAAAAAGACAGCaaGGAAGAGAGTGTGATGGTTCCTGTTAGACTGAGGCCCAAATCAGAAGATTCCAAGTCAGAAGAACAGAAAGCAGACGAGCCACCTCCGATagattattttgattatgttaatccTTCGCAGTCTTAG
- Protein Sequence
- MSNWDRPQSSGSSYQGYGAYYNPQSQPENTNLYGNLYQQPFYNGSCYNGPPQAFRNGYQGNYQNPPTSAEEFFRIIQEQQNQESPHEYRARSIDYDSLGHGCNIPTMVFPSSNSSGGDQVQQGKRKIYENSKGGGRGGGRYQHGAIPRPQNNFRRGGYNNIKKPVQNQPQNHWAAVPNGDIIGDDPKVEESKNSSKRGKGFAQRNTNRYNGYHQKDSGTVKRDNFSKDWRARGKAKGNEESQRDRLTSQLYSGALECLVCCERMRQADPVWSCPACHHVLHLRCTVRWASSSRADNGWRCPACQNVTDAIPTDYKCMCGKVINPQWVRGETPHTCGQVCGKDRGCPHCCTLLCHPGPCPPCSANIDRYCGCNRTKQVVQCSSRVELTCDSVCEKLLNCKVHHCMKGCHNGPCDSCDNTVHQRCHCGQEERDIPCDRADIEDFYSCDKLCDKLLACGQHRCTKTCHPGSCSTCILSPDVVLTCPCGKKPLAPGSRKSCKDPVPLCGAVCGKVLVCGVAGRKHTCAVLCHSGDCPPCPETTSVMCRCGAMAKEVPCAGLDSRPDDARCSKRCTKKRSCGKHKCNQACCIEIDHFCPLPCNKMLSCGRHRCQELCHRGNCRPCLAASFTELSCECGKAVLYPPVACGTRPPECKAPCSRDHPCGHPPTHHCHSQSECPPCSVLTTKYCFGAHELRKTVPCHIGEFSCGRACNKKLDCGHCCIKICHAGPCTPEGTRCTQPCTVPRPTCGHECAAPCHPGQPCNPQPCQSKVEVRCECGRRVVKKSCSENSCEYQRLATAQLASQMADVRLGKTVDLRSSSKPVYKLECTDECKIAERNLRLAIGLQISNPDLSSKLCPRYSQFLMTWAKKDPKFAQNVHEKLTEVVQLAKTSKQKSRSYSFPSMKSEKRQFIHEYSEHFGVESVAYDAEPNRNVVATAYKDKSWLPSYSILEMLERAAGKRKVPSLLPSLKKDSKEESVMVPVRLRPKSEDSKSEEQKADEPPPIDYFDYVNPSQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01298843; iTF_00165760;
- 90% Identity
- iTF_01298843; iTF_00165760;
- 80% Identity
- -