Acus068682.1
Basic Information
- Insect
- Arma custos
- Gene Symbol
- stc
- Assembly
- GCA_037127475.1
- Location
- CM073764.1:127547431-127567459[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 7.7e+04 -4.3 1.6 15 18 266 269 265 270 0.75 2 18 1.9 7.2e+04 -4.0 1.6 15 19 293 297 292 297 0.81 3 18 0.012 4.6e+02 3.0 0.3 4 10 326 332 325 333 0.97 4 18 2.5e-06 0.096 14.8 16.3 4 19 340 355 338 355 0.94 5 18 0.52 2e+04 -2.3 0.6 5 10 380 385 380 385 0.95 6 18 0.0009 35 6.6 15.7 3 18 393 408 391 409 0.91 7 18 2 7.6e+04 -4.1 1.5 9 13 415 419 414 420 0.71 8 18 2.2e-08 0.00083 21.3 13.8 1 18 448 465 448 466 0.99 9 18 3.1e-08 0.0012 20.9 12.0 1 19 507 529 507 529 0.88 10 18 0.0018 69 5.6 8.4 1 11 569 579 569 580 0.96 11 18 2 7.7e+04 -4.4 1.1 4 10 584 590 584 590 0.58 12 18 7.3e-11 2.8e-06 29.2 12.3 1 18 596 613 596 614 0.97 13 18 1.6 6e+04 -3.8 0.6 6 10 643 647 642 648 0.72 14 18 2 7.7e+04 -10.4 14.5 7 19 658 671 653 671 0.68 15 18 0.66 2.5e+04 -2.6 0.2 9 13 689 693 688 694 0.79 16 18 0.00031 12 8.1 11.7 1 17 707 722 707 722 0.96 17 18 0.94 3.6e+04 -3.1 1.5 5 10 726 731 726 731 0.89 18 18 0.0034 1.3e+02 4.7 16.1 1 18 738 757 738 758 0.82
Sequence Information
- Coding Sequence
- ATGTCCAACTGGGATAGGCCCCAAAGTAGTGGTAGCTCATATCAGGGATATGGTGGTTATTACTATCCTCAATCGCAACCAGACAATTCAAATTTGTATGGTAACTTATATCAACAAACTTATTATAATGGGTCCTGTTACAATGGTCCATCTCAGGCCTTTAGAAATGGTTATCAACGGAATTATCAAACTCCTCCAACATCTGCAGAAGAATTTTTCAGAATCATTCAAGAACAACATCAAGAAAGTCAACATAGCAGGAGAAATGCTGACTATGACACTCTTGGCCATGGATGCAATATTCCTACAATGGTTTTTCCATCATCTAATACCAGTTCAGGTGGAGACCAAGTACCACAAGGTAAAAGAAAGAATTATGAAAACAGCAAAGGGGGAGCAAGAGGTGGACGATACCAGCATGGTGCTGTTCCTAGGCCACAAAGTAATTTCAGGCGTGGCGGAtacaataatgttaaaaaaactgCACAAAATCAGCATTGGGCTGCGGTTCCAAATGGTGATGTGATTGGTGATGAATCCAAggcagaagaaataaaaaattcattgaaGCGTGGAAAAGGTTTCGCTGCGAGGAATAATAACAGATTTAATGGCTACCAaaagGATAGTGGTACATTGAAGCGTGACAAGTTCAGTAAAGATTGGCGAGCTAGAGGGAAAGGTAAAGGAAacgaGGAGTGCCAGCGTGACCGATTAACTTCTCAGTTGTATTCTGGTGCTTTAGAATGTTTAGTCTGTTGTGAAAGGATGAGACAAGCAGATCCTGTTTGGTCTTGCCCAGCTTGCCATCATGTCCTTCATCTTCGTTGCACCGTTCGTTGGGCATCATCTTCAAGAGCAGATAACGGTTGGAGATGCCCAGCTTGTCAAAATGTTACTGATGCGATACCTACAGATTACAAGTGCATGTGTGGAAAAGTGATTAATCCGCAATGGgTTCGAGGAGAAACACCTCATACTTGTGGGCAAGTTTGTGGAAAAGATCGTGGTTGTCCACATAGTTGTACTCTCCTGTGCCATCCTGGTCCTTGTCCACCATGTTCAGCAAATATCGACAGgtatTGTGGTTGTAAAAGAACAAAGCAAGTTGTCCAGTGCTCATCCAGAGTGGAATTAACTTGTGATTCTGTGTGTGAAAAGTTGCTCAACTGTAAAGTTCATCATTGCACAAAGGGTTGCCATACTGGTGCTTGTGAACCTTGCAACAATACCGTTCATCAAAGATGCCATTGTGGACAAGTGGAAAGGGATGTACCTTGTGATCGTCCTGACATCGAAGCTGTCTATAGCTGCGACAAGTTATGTGACAAACTTTTGGCTTGTGGACAGCATCGATGTACTAAGACTTGCCACCCAGGTTCCTGCTCTACGTGTATATTATCTCCAGATATTGTGCTAACTTGCCCTTGTGGTAAAAAACCTTTGGCTCCTGGCTCGAGGAAATCCTGTAATGATCCAATACCGCTTTGTGTAGCAGTTTGTGGAAAGGTGTTAATGTGTGGTGCAGCAGGAAGAAAACATACTTGTGCGGTAAAATGTCACAATGGTGACTGCCCACCATGTCCAGAAACTACATCAGTCATGTGTCGGTGCGGAGCTATGGCTAAAGAAGTTGCCTGTGCTGGCTTGGATTCACGTCCGGATGATGCCCGTTGCTCTAAACGATGTACAAAAAAGAGAAGCTGTGGAAAACACAAGTGCAACCAAGCTTGTTGCATAGAGATTGACCACTTTTGCCCCCTTCCATGCAATAAAATGTTGAGTTGTGGAAGACATCGTTGCCAGGAACTTTGCCACAGAGGCAACTGTCGACCCTGTCTTGCTGCGAGTTTTAATGAGTTGAGCTGTGAGTGCGGAAAAGCGGTTGTTTACCCTCCAGTTGCTTGCGGGACAAGACCTCCAGAGTGCAACGCTCCCTGCTCTCGCCACCATCCGTGTGGCCACCCTCCTACTCATCATTGCCACTCACTCAGTGAATGTCCTCCATGCTCAGTTCTCACTACCAAATATTGTTTTGGAGCACATGagTTAAGGAAAACAGTTCCTTGCCATATTGGAGAATTTTCCTGCGGACGTGCTTGTAACAAAAAAttagactgcgggcattgttgcATCAAGATCTGCCATGCTGGGCTCTGTACACCCGAGGGTACAAGATGCACCCAGCCATGTACTGTACCAAGAGCAACTTGCGGCCACGAATGTGCCGCTCCTTGTCACCCTGGACAGCCTTGTAATCCACAGCCCTGCCAATCAAAGGTTGAGGTTCGATGTGAATGTGGAAGGAgagttgtaaaaaaaagttgttcagAAAACAGTTCTGAATATCAACGGTTAGCCACTGCTCAGCTAGCATCTCAAATGGCTGATGTTCGTCTTGGAAAAACAGTTGATCTCAGATCTTCCTCTAAGCCAGTTTATAAGCTTGAATGTACAGATGAATGCAAAATAGCTGAAAGAAACTTACGCCTAGCAATAGGTCTGCAAATATCAAATCCAGATCTATCGTCAAAGCTAAGTCCGAGGTATTCTCAGTTCCTAATGACATGGGCAAAAAAAGATCCTAAATTTGCTCAGAATGTTCACGATAAGCTTACAGAAGTTGTACAACTGGCTAAAACATCAAAACAGAAAAGCAGGAGTTATTCCTTTCCTTCTATGAAATCTGAAAAGAGGCAATTTATACACGAGTATAGTGAACACTTTGGGGTTGAAAGTGTTGCTTATGACGCTGAACCCAATCGTAATGTAGTTGCTACAGCTTATAAGGATAAGTCATGGCTTCCTAGTTACTCAATTCTTGAGATGTTGGAGCGAGCAGCAGGCAAAAGGAAGGTTCCTTCTCTTCTtccatcattaaaaaaagatagCAAAGAAGAAAGCGTGATGGTTCCTGTTAGACTGAGGCCGAAATCAGAAGATGCTAAGGCAGAAGATGACAAGCCTGACGACCCACCACCAATTGATTATTTTGATTACGTTAATCCCTCACAGTCTTAG
- Protein Sequence
- MSNWDRPQSSGSSYQGYGGYYYPQSQPDNSNLYGNLYQQTYYNGSCYNGPSQAFRNGYQRNYQTPPTSAEEFFRIIQEQHQESQHSRRNADYDTLGHGCNIPTMVFPSSNTSSGGDQVPQGKRKNYENSKGGARGGRYQHGAVPRPQSNFRRGGYNNVKKTAQNQHWAAVPNGDVIGDESKAEEIKNSLKRGKGFAARNNNRFNGYQKDSGTLKRDKFSKDWRARGKGKGNEECQRDRLTSQLYSGALECLVCCERMRQADPVWSCPACHHVLHLRCTVRWASSSRADNGWRCPACQNVTDAIPTDYKCMCGKVINPQWVRGETPHTCGQVCGKDRGCPHSCTLLCHPGPCPPCSANIDRYCGCKRTKQVVQCSSRVELTCDSVCEKLLNCKVHHCTKGCHTGACEPCNNTVHQRCHCGQVERDVPCDRPDIEAVYSCDKLCDKLLACGQHRCTKTCHPGSCSTCILSPDIVLTCPCGKKPLAPGSRKSCNDPIPLCVAVCGKVLMCGAAGRKHTCAVKCHNGDCPPCPETTSVMCRCGAMAKEVACAGLDSRPDDARCSKRCTKKRSCGKHKCNQACCIEIDHFCPLPCNKMLSCGRHRCQELCHRGNCRPCLAASFNELSCECGKAVVYPPVACGTRPPECNAPCSRHHPCGHPPTHHCHSLSECPPCSVLTTKYCFGAHELRKTVPCHIGEFSCGRACNKKLDCGHCCIKICHAGLCTPEGTRCTQPCTVPRATCGHECAAPCHPGQPCNPQPCQSKVEVRCECGRRVVKKSCSENSSEYQRLATAQLASQMADVRLGKTVDLRSSSKPVYKLECTDECKIAERNLRLAIGLQISNPDLSSKLSPRYSQFLMTWAKKDPKFAQNVHDKLTEVVQLAKTSKQKSRSYSFPSMKSEKRQFIHEYSEHFGVESVAYDAEPNRNVVATAYKDKSWLPSYSILEMLERAAGKRKVPSLLPSLKKDSKEESVMVPVRLRPKSEDAKAEDDKPDDPPPIDYFDYVNPSQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764351;
- 90% Identity
- iTF_00764351;
- 80% Identity
- -