Hhal003102.1
Basic Information
- Insect
- Halyomorpha halys
- Gene Symbol
- Hr39
- Assembly
- GCA_000696795.2
- Location
- NW:187905-280222[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.071 4.4e+02 -0.5 0.2 68 185 25 152 6 169 0.52 2 4 0.87 5.4e+03 -4.1 7.2 68 172 155 277 118 284 0.65 3 4 7.2e-09 4.5e-05 22.5 0.1 1 28 396 423 396 434 0.87 4 4 1.6e-69 9.8e-66 222.3 0.0 163 408 432 672 418 672 0.95
Sequence Information
- Coding Sequence
- ATGGAGGGCGGTGTCAAGTGCAGGCCCACCTCTGCGGGGGTGGTCCTTAGTCTCCGTCCTGCGGaaaatgaacaaaagtaTTATCAAGCCCAGTGCAATGGCGAGCTTATATCTTGCTCAAGCAGTGCATGTTCCGTTGTAGTAAGCAATGAACAAATGAATGTTGATGATGACTCATCAGCAGCTGATGCTGAAGTCAGCACCTTTACAAGTGAAACTgTTAACCTTAGGAATAGGCATGGAGAAGACCCCAGGATCCAGGTGGAAAGGCCGATGTCTTGGGAGGGTGAGCTGTCAGATACAGAGGTTGCTACAATCAAACcgGAGCCAGAAGATGTGGCTGATACGATAGACAATCAAAATTCCAGCAAGGGCAACCAAACGAAAGGGGATAATGAAGTGCCTCAGCCTTTGAAACTGAACAACGAGACAATCaatgaaaaagTTTTGGACCAAACAAGGACAAATCATATTAATGCTCAAACTGAGCTTCCTCTCCTAGTGGATAAGATTTTGACTAGCGGTAACTATCTGAAAGGGGCTGGTCCTACGCCTAGCCCCGACTCTGCCGTGTACTCTTGCTACTCTCCGACAGCTAGCCCTGTCACCTCCCGACATATCTTGTCTTCCTCCTCCGGGATATCATCTCCATTCACGCCATCTTTATCGAGGAACAACAGTGATGCTTCGCAGTATGGTGGTTCTCAACATTCATCATGCTACAGTCACAGttactcATCGGTATCAGTGTCTCCAACCCAGTTCTCTCCTACTCACTCTCCGATCCAGGGTAGGCACATCCCAAGGCCTGGCTTTCCCTCGCCTGTTCTCAACTCCAGGAGTGTTCACGACTATTCCATTcaagATGATGGAAGTGTGCTTGAAGATAAATTCTCATCATTGACTGCCGATATGGTGCAGCATTCAGCTGGCCTCGCTTCACCAGGAATCAGCAGGCAGCAACTTATAAAcagccCTTGCCCTATTTGTGGAGACAAAATCTCAGGGTTCCACTACGGTATTTTTTCCTGTGAGAGCTGTAAAGGATTCTTCAAAAGAACTGTCCAGAATAGGAAGAATTACGTCTGCCTTAGAGGATCCTCTTGCCCTGTTACTATTGCAACAAGAAAGAAGTGTCCAGCTTGCAGGTTCGACAAGTGTTTAAACATGGGCATGAAGTTAGAAGCAATTAGGGAAGATCGGACACGAGGTGGGAGGAGTACCTATCAGTGTTCGTACACCGTACCAGCTGGGCTTGTCGACCAGAAGTGTTCCGATTTAAGGCAAGAGCACGCCCAACCAACTTCATTAATTCCTCCTCTCCTCCAGGAAATTATGGAAGTGGAACACCTTTGGCAATACAACGAGGGGGAAGTGAGAGGGGGCGGGCGTGGTGGCCCGCAGAGTAGTGGAGGTGGCAACTCGACCGATCTCATGGCCAACTTGTGCAATATCGCCGACCATCGTCTCTACAAGATCGTCAAGTGGTGCAAGTCACTCCCTCTCTTCAAGAACATATCAATTGACGATCAAACTTCACTCCTCATTAACGCTTGGTGCGAGCTTCTCCTATTCTCATGCTGCTTCAGGTCAATGAGCTCTCCAGGTGAGATTAGGGTGTCCCTAGGCAAGTGTATTACACTGCCCGAAGCAAGGACCCTTGGCCTCGGGCCACCGATTGAGCGGATGTTGAACTTCACGGAGCACTTGAGGCGGTTGAGGGTCGACCGATACGAATATGTGGCTATGAAGGTCATTGTTCTCTTGTCCTCTGacACAAGCGAATTAAGGGAACCAGAGAAGGTAAGAGCATCCCAGGAGAAAGCACTCCAAGCACTCCAGCATTACACTCTCGCCCATTATCCAGACATTCCGTCCAAGTTCGGAGAACTACTTCTTAGGATACCAGACCTACAAAGAACCTGTCAGgttGGTAAAGAAATGCTTTCCATCAAAAGCAAAGAAGGAGAAGGACCCAGTTTCAATCTGCTCATGGAACTGTTGAGAGGTGACCACTGA
- Protein Sequence
- MEGGVKCRPTSAGVVLSLRPAENEQKYYQAQCNGELISCSSSACSVVVSNEQMNVDDDSSAADAEVSTFTSETVNLRNRHGEDPRIQVERPMSWEGELSDTEVATIKPEPEDVADTIDNQNSSKGNQTKGDNEVPQPLKLNNETINEKVLDQTRTNHINAQTELPLLVDKILTSGNYLKGAGPTPSPDSAVYSCYSPTASPVTSRHILSSSSGISSPFTPSLSRNNSDASQYGGSQHSSCYSHSYSSVSVSPTQFSPTHSPIQGRHIPRPGFPSPVLNSRSVHDYSIQDDGSVLEDKFSSLTADMVQHSAGLASPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGSSCPVTIATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCSYTVPAGLVDQKCSDLRQEHAQPTSLIPPLLQEIMEVEHLWQYNEGEVRGGGRGGPQSSGGGNSTDLMANLCNIADHRLYKIVKWCKSLPLFKNISIDDQTSLLINAWCELLLFSCCFRSMSSPGEIRVSLGKCITLPEARTLGLGPPIERMLNFTEHLRRLRVDRYEYVAMKVIVLLSSDTSELREPEKVRASQEKALQALQHYTLAHYPDIPSKFGELLLRIPDLQRTCQVGKEMLSIKSKEGEGPSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00373210;
- 90% Identity
- iTF_00165283;
- 80% Identity
- iTF_00763919;