Hqua002701.1
Basic Information
- Insect
- Halictus quadricinctus
- Gene Symbol
- Rel
- Assembly
- GCA_028454245.1
- Location
- CM052119.1:6791815-6796082[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.52 3.3e+03 -2.0 0.0 56 75 13 32 8 40 0.82 2 3 1e-39 6.4e-36 123.9 0.9 1 168 80 270 80 271 0.87 3 3 1.6 1e+04 -3.6 0.2 102 133 785 816 783 837 0.65
Sequence Information
- Coding Sequence
- ATGCCAGAGGTTTTTGAAAATTATGCCGTTTACAAAAGTGTAACCGAAAACGAGGATTATTCTTCTCACGGACATGATTTGCTAATGATGAATACTCAAGATGCATTTAGTCCCTTTAATGGATCTCAAGGGATAAGTGCTGCATCACCTTCTTCAACATTTTTGTCATCATCTCTGTCACCACTGTATAACATGGATGTGAATTTTAAAGATGTCACAGTTATTGGTGAACCGTATCTTACAATCTTGGAGCAGCCAATTGACAAATTTCGATTTCGATATAAATCAGAGATGATAGGAACGCATGGAAGTTTAGTAGGATCAAATGTTGGAAGTGGTCGCAATAAACATTACCCAACAGTTCAGTTACATAATTTTCCTACAAGTGCAAAAATACAATGTACATTAGTTACATCTGAAGAGGGTAAAAGGATACCTCATGCCCATAGATTGGTACGTAGAGTAAATGGGGAGGATTACGATGATCCCCATATAATCGATGTCACTCCGGAGAATAATTTTATTGCAACATTTCATGGGATGGGAATTATACACACAGCAAAGAAATATGTACGAGAAGAACTTATTAAAAAAATGCGACATGAAGCAATAGAAAAAAAAAAAAGAGAATATGGAAGTGATACCCTTACTACACGAGAAGAAGCTCAGATCAAACATGATGCAGATATTTATCAAAAATGTGTGAACCTAAATAGTGTCGCACTATGTTTTCAAGCATTCATTTTGGATGAACGCAATGTTATGAGACCAATACAAAACTGTATTGTTTATTCAAAACCTATTAATAATCTGAAAAGTGCATTAACCGGAGAACTGAAAATATGTAGAATTGACAAACACACTAGCAGTGTTGATGGAGATGAAGAAGTTTTCCTACTCGTAGAAAAAGTAGGAAAAAAGAACATAAAAGTAAAATTTTTTGAGGTAGATGAGGATAATAGCGAAGTTTGGTTTGACTATGGACGTTTCTCAGAATTGGATGTACATCATCAATATGCAATTGTATTTCGAACACCACGATATAAAGATTCTACTATTACATCCCCAAAGGAAGTCTTCTTGCAACTAGAAAGACCAACTGATGGTGATTGTTCCGAGCCAATAAAATTCATTTATAAACCAAGCGATAGAATTATAGGAAAGAAGCGTCAAAGAATGTCCTACTCTGGAAGCAGCGATTTATCGAACTTCGTATTACCCAATTTTAATAGTGAAATAGGAAATATATCAGGAATTTCAAATGGAGATAGTCGAGAAATTTCTCAAGAGATAAAAAAGTTTTTCCCACAGACTGAAAACGTACATACAGTTTTTGATAATATAAATATTGATGAATATATTGCAGAATTGAACGAAGAGTTCTTGACGACTGATGGCCCATCATCTAAACAGCATGAAAATGATATAATGTTTCCTAAAAATATACTTATGGAAGCTATGAGATACATGAAATTAGATCCGAAAAATTGTCAAACACAGATACGTAAGCTACTTAAATATCGTTCCACTTTTGGAGATTCTCCATTGCACGCAGCACTTCGGTATGGTCAACGTGACATTGTCAAGTACATGTTAATGCTGATAAGCTCTGATAAGGATTGCAAGATACTTGTCAATGAACAGAATAGCTCTGGCAAAACGCCGCTGCATTATGCAGTTCTACAAAATCTTGCAGATAGTATAAAAGCGCTACTCGTGCTTGGAGCTGATCCAAACCGATCAGATGAACAGGGATGTTGTCCATTACACATTGCTGTTAAAAATCCTCAAGCTGGTGCTTGTGTGAGAACTTTATTATCGGATAAAAGAACTAAAATGGAAATTCATAATGATGCCGGATGGACACCATTGCAACTTGCAGCAGAAGCTGGTTCATACACTGCAGTATGTTTACTTGTTGAAGCTGGGGTAAATGTAAATAGTACCGATATGTCATATGGTCGAACTGCATTACACATTGCTGTGGATGGCGGACACAAAGATATTGTTGAATATTTATTGAAAAAGACAAAAATTGACATAAACAAAAGAAATTTCAGTGGAAATACTGCTTTACACTCAGCAGTTGTATACTCTGGAGTAAGAGCAAAAGAGTTGTGTGCATTGTTAATCAAATATGGAGCAGATCCACATATTCAAAATCACAATAGAGAAACAAGCGATGATGAAAGGAAGACCACACATGTAAAGGAAGAAGTTAACTCTGACGATGAAAACTCTGAAGAATTGAATGGACAATCGTCGTTTGATTTGGCGATGAGCAAACCAGATATTTTGCAACTTCTTAACGGTCAAACTGAGGAAGCACCAAGTGAAATTTCTTCCGTTTTCACTAAACAAGAAATACAAGATGAGGACTCGCAGAAGGAATTGTTAAACAATGAGCAGAAACAACAATTGTCCGATATTCTTGATGAAACACAAGGATGGAGAAAACTTGCTAAACATTTGAAATTTGAATCCTTTTTAAGGACATTACAACATACTTCGTTGAGCCCATCACTACTCCTATTAAATTACATAGACGTTCAGTCATTGATGTCCCTCACCGATCTGGAAAGGGCATTAAGAAATATTGATGAAACCAAAGCGGCGAATTACGTTAATGGAATCATAAGTGTACACATGCAGTCTTAA
- Protein Sequence
- MPEVFENYAVYKSVTENEDYSSHGHDLLMMNTQDAFSPFNGSQGISAASPSSTFLSSSLSPLYNMDVNFKDVTVIGEPYLTILEQPIDKFRFRYKSEMIGTHGSLVGSNVGSGRNKHYPTVQLHNFPTSAKIQCTLVTSEEGKRIPHAHRLVRRVNGEDYDDPHIIDVTPENNFIATFHGMGIIHTAKKYVREELIKKMRHEAIEKKKREYGSDTLTTREEAQIKHDADIYQKCVNLNSVALCFQAFILDERNVMRPIQNCIVYSKPINNLKSALTGELKICRIDKHTSSVDGDEEVFLLVEKVGKKNIKVKFFEVDEDNSEVWFDYGRFSELDVHHQYAIVFRTPRYKDSTITSPKEVFLQLERPTDGDCSEPIKFIYKPSDRIIGKKRQRMSYSGSSDLSNFVLPNFNSEIGNISGISNGDSREISQEIKKFFPQTENVHTVFDNINIDEYIAELNEEFLTTDGPSSKQHENDIMFPKNILMEAMRYMKLDPKNCQTQIRKLLKYRSTFGDSPLHAALRYGQRDIVKYMLMLISSDKDCKILVNEQNSSGKTPLHYAVLQNLADSIKALLVLGADPNRSDEQGCCPLHIAVKNPQAGACVRTLLSDKRTKMEIHNDAGWTPLQLAAEAGSYTAVCLLVEAGVNVNSTDMSYGRTALHIAVDGGHKDIVEYLLKKTKIDINKRNFSGNTALHSAVVYSGVRAKELCALLIKYGADPHIQNHNRETSDDERKTTHVKEEVNSDDENSEELNGQSSFDLAMSKPDILQLLNGQTEEAPSEISSVFTKQEIQDEDSQKELLNNEQKQQLSDILDETQGWRKLAKHLKFESFLRTLQHTSLSPSLLLLNYIDVQSLMSLTDLERALRNIDETKAANYVNGIISVHMQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00763019;
- 90% Identity
- iTF_00763019;
- 80% Identity
- -