Basic Information

Insect: Habrosyne pyritoides
Gene Symbol: -
Assembly: GCA_907165245.1
Location: OU015615.1:4990001-5003179[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0048 0.35 11.8 0.9 1 23 356 378 356 378 0.98

2 11 0.00063 0.047 14.6 7.4 1 23 385 407 385 408 0.95

3 11 0.06 4.4 8.4 1.8 1 23 412 434 412 434 0.97

4 11 0.67 50 5.1 3.5 1 23 439 462 439 462 0.97

5 11 0.0031 0.23 12.4 0.2 1 23 466 489 466 489 0.94

6 11 4.5 3.3e+02 2.5 0.2 3 20 503 520 502 522 0.85

7 11 1.3 94 4.2 0.4 2 23 580 602 579 602 0.94

8 11 0.0081 0.6 11.1 0.7 2 20 618 636 617 639 0.91

9 11 7.8e-05 0.0058 17.4 0.8 1 23 645 667 645 667 0.99

10 11 0.00016 0.012 16.5 4.5 3 23 676 696 674 696 0.97

11 11 3.2e-05 0.0023 18.7 1.3 1 23 702 725 702 725 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0048	0.35	11.8	0.9	1	23	356	378	356	378	0.98
2	11	0.00063	0.047	14.6	7.4	1	23	385	407	385	408	0.95
3	11	0.06	4.4	8.4	1.8	1	23	412	434	412	434	0.97
4	11	0.67	50	5.1	3.5	1	23	439	462	439	462	0.97
5	11	0.0031	0.23	12.4	0.2	1	23	466	489	466	489	0.94
6	11	4.5	3.3e+02	2.5	0.2	3	20	503	520	502	522	0.85
7	11	1.3	94	4.2	0.4	2	23	580	602	579	602	0.94
8	11	0.0081	0.6	11.1	0.7	2	20	618	636	617	639	0.91
9	11	7.8e-05	0.0058	17.4	0.8	1	23	645	667	645	667	0.99
10	11	0.00016	0.012	16.5	4.5	3	23	676	696	674	696	0.97
11	11	3.2e-05	0.0023	18.7	1.3	1	23	702	725	702	725	0.95

Sequence Information

Coding Sequence: ATGAGGTGCTGTGTTGTGGGGTGTAAGAATGATTCCAGACACATATCCAAATCTCAAGGAATTACTTTTCATGTCTTCCCCAACGAACCGTCCCTACGCACAGCATGGCTCCGAGCCCTCAGCAAAGAGGATTGGGAGCCCAAAGAACGCAGTGCAGTCTGCTCGGAGCATTTCTTGTGCGATGATTTATATGAAACTAAGAGTGGACTGAGGAAAGTTAGAATCGGAGCTGTTCCTATTATTGTACAGGATGTAACAAATTGCGATTATGGAGAACCAGCAAGTCTGAAGGTTTGCAGAATATGTCTAGTGATGGGCAGCAAACTATTTCCAATAAGAAAGTACAAGTTGGAGCAAGCTTATGAGCATCTAACTGGATTATCTTTATGTGCAAAAGATAAACTGCCGCAGAAGCTATGTCCGGAGTGCACACAGAAACTACTTAATTGCAGTCGCTTCAGGAATAAGAGTTTGCGAGCTAATTCTCTTATGTTGGAGATCATTAAGAAACATGATAACTTAACATTAACAAATATAAGGACAATAAACAGAGAAAATAATCAATTATCTTCGAATCTTAATTCTAATCACTTTAAACCTGACCACTGCGACTTACACATAGAATATAATGAAGACATACAATTGAAAGCCGAAGATCCTCCTTCCATACAAGAAGTTAACGTGGATATTGAAATCAAACATGAGACAGTTACCTCTGACGTTGAATATCTAAACGAAAACGATGAACTGGGTAAAGAAAACGAGACCAATGGAGTTGACGATGATATTACCTCTGATAAAGACTACTCCACAGACGATAGTCTTCCGTTAGAAAAGCGTCGACAGAAGAAAGTGAAAATTAAAAAGCAAAAAATAGAAAAGGTTAAAAAGGTACGCAAGAAAGAGATGAAAGATCCAACGGTGCCAAAGGTTGATAGGAGAAGGAAACCGTTCCTTAATGATGAGTTGAATGAGACGCTGTTTACGATAGCTGATCTATCATTCGATGAACAAATTGCTGAGATCAATAAGAGACAGGAAAGCGCTAATTATAAAAATTCTGTGTTTAAATGTACAGAATGCTACAAAGGTTTTTTGGATGAAGATGCTTACAATAGTCACATGACCAGACATACTGATCAATGCGGTGAATATTCATGTGAGATATGCAAAACACATTTTAAACATCCTCATGCGTTGAGGAAACACATCACGGCGCATCACACGCAGCGGTTCAGCTGTAATCAGTGTCCGTACGTCACCACGCATAGACAGACGGCTAGGCTCCACGAGAGATGGCACAAGGGTACTAAATATCACTGTCCACATTGTCAGGATGAGTTTGTTAAATTTACGACATACATGGGACACATACGCATCAAGCACCCTTCAGACTTCGTTTGTGAACTGTGCGGGTACTCCTTCGTCAGCGCCAAAGGGATTGAGCTGCATAAGAAGTTGAAACATCGGTTGGATAGTGGACAGATACCTGAAGACGGTCCGTTCTGCGAGCAGTGCAACGTCAGGTTTGTGTCAGTGGAAGCTCACAGGAGACATTTGCTCGTCTCGGCGCGACACACCGCCTCGGACAAGGACACGAGAGACGCAAGCAAACCAAAAAGAGGGAGAAAGTGTAAGGAAATGAGAGAGAAGGATAGACGACCGCGCGAGAAAGAGAGCGACGATGACAAGAGGAAACTTTACCCGAGCCAGATGAGGAAAGCAGAGGGACCTATACCGTGTGAACAGTGTGGTTTACAATTGGAAGACTCCCGCGCTTACCACGGTCATTTCAGGCGCATGCATCCGGATAAGAATCGAACCAACTACCCCTCGATGAAGTCACCGTGCATGTGCGAAGTTTGCGGCAGGATGTTTCAGAGTTACGCCCTACTGAAGGACCACCGCTGGGTGCACACTGGCGAGCGGCCCTTCCAGTGCGAGTCGTGTGACAAGGCATTTCGCATGAAACAACGTCTAGTAGCCCATCGCCGCGTCCACAGCGCACTCAAACCTACTTACGGCTGTGAACTCTGCGGGAAGCACTTCTCCACGCATAGCAATAGGCAGAGGCATATGTTTATACACACTGGACTGAAACCGTTCAAATGCGAGATGTGTGGGAAAGGGTTCAAACACGCGAGTGAGAAGAGAGCACACATAACATATGTGCACCTGAAGAAGCCCTGGCCGAAGCGGACCAGGGGCAAGCGGAGGGACGGCAGGCAG
Protein Sequence: MRCCVVGCKNDSRHISKSQGITFHVFPNEPSLRTAWLRALSKEDWEPKERSAVCSEHFLCDDLYETKSGLRKVRIGAVPIIVQDVTNCDYGEPASLKVCRICLVMGSKLFPIRKYKLEQAYEHLTGLSLCAKDKLPQKLCPECTQKLLNCSRFRNKSLRANSLMLEIIKKHDNLTLTNIRTINRENNQLSSNLNSNHFKPDHCDLHIEYNEDIQLKAEDPPSIQEVNVDIEIKHETVTSDVEYLNENDELGKENETNGVDDDITSDKDYSTDDSLPLEKRRQKKVKIKKQKIEKVKKVRKKEMKDPTVPKVDRRRKPFLNDELNETLFTIADLSFDEQIAEINKRQESANYKNSVFKCTECYKGFLDEDAYNSHMTRHTDQCGEYSCEICKTHFKHPHALRKHITAHHTQRFSCNQCPYVTTHRQTARLHERWHKGTKYHCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRLDSGQIPEDGPFCEQCNVRFVSVEAHRRHLLVSARHTASDKDTRDASKPKRGRKCKEMREKDRRPREKESDDDKRKLYPSQMRKAEGPIPCEQCGLQLEDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHRWVHTGERPFQCESCDKAFRMKQRLVAHRRVHSALKPTYGCELCGKHFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKHASEKRAHITYVHLKKPWPKRTRGKRRDGRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00761748; iTF_01083401; iTF_01083752; iTF_01252241; iTF_00007508; iTF_00007160; iTF_01251833; iTF_01416856; iTF_01417235; iTF_01437470; iTF_01437168; iTF_01416287; iTF_01415924;
90% Identity: iTF_01252241;
80% Identity: iTF_00761748;