Basic Information

Insect: Thyatira batis
Gene Symbol: -
Assembly: GCA_905147785.1
Location: LR990515.1:1482698-1500825[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.005 0.37 11.8 0.9 1 23 322 344 322 344 0.98

2 11 0.0041 0.31 12.1 9.5 1 23 351 373 351 374 0.94

3 11 0.062 4.7 8.3 1.8 1 23 378 400 378 400 0.97

4 11 0.087 6.5 7.9 2.0 1 23 405 428 405 428 0.97

5 11 0.0032 0.24 12.4 0.2 1 23 432 455 432 455 0.94

6 11 1.3 99 4.2 0.5 3 21 469 487 468 492 0.90

7 11 1.1 79 4.5 0.2 2 23 546 568 545 568 0.94

8 11 0.0083 0.62 11.1 1.1 2 20 584 602 583 605 0.89

9 11 0.00011 0.0083 17.0 0.6 1 23 611 633 611 633 0.97

10 11 7.7e-05 0.0058 17.5 5.3 1 23 640 662 640 662 0.97

11 11 2.3e-05 0.0017 19.1 1.2 1 23 668 691 668 691 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.005	0.37	11.8	0.9	1	23	322	344	322	344	0.98
2	11	0.0041	0.31	12.1	9.5	1	23	351	373	351	374	0.94
3	11	0.062	4.7	8.3	1.8	1	23	378	400	378	400	0.97
4	11	0.087	6.5	7.9	2.0	1	23	405	428	405	428	0.97
5	11	0.0032	0.24	12.4	0.2	1	23	432	455	432	455	0.94
6	11	1.3	99	4.2	0.5	3	21	469	487	468	492	0.90
7	11	1.1	79	4.5	0.2	2	23	546	568	545	568	0.94
8	11	0.0083	0.62	11.1	1.1	2	20	584	602	583	605	0.89
9	11	0.00011	0.0083	17.0	0.6	1	23	611	633	611	633	0.97
10	11	7.7e-05	0.0058	17.5	5.3	1	23	640	662	640	662	0.97
11	11	2.3e-05	0.0017	19.1	1.2	1	23	668	691	668	691	0.95

Sequence Information

Coding Sequence: ATGCCTTATTTTCCAAATGAATCCTCCCTACGCACAGCATGGCTGCGAGCCCTCAGCAAAGAGGATTGGGAGCCGAAGGAGCGCAGTGCAGTCTGCTCCGAGCATTTCCTGTGCGATGACCTTTATGAGACTAAAAGTGGTCTCAGAAAAGTTAGAGTTGGTGCCGTTCCTATTATAGTACAAGATGCAACAAACTGTGATTATGGGGAGCCAGCGAGTCTCAAGGTATGCAGAATATGCTTGGTAATTGGAAGCAAGCTATTCCCGATTAGAAAATACAAGTTGGAGAAAGCTTATGAACATCTCACTGGATTATCGTTATGTGCTGAAGATAAATTACCACAAAAACTCTGCCCTGAGTGTACGCAGAAGTTACTGAACTGCAGTAGGTTCAGGAACAAGAGTCTCCGAGCTAACTCGCTCATGTTGGAAGTCATCAAGAAGCAAGATAATCTAACAATAACAAATATAAAAACAATAAGCAGAGAAAATAATCAGTTAACATCAAATTTAGATGCAAAACATTTTGACCCGGACCACTGCGATATGCACATAGAATTCAATGAAGACATATTTAAGGAGCCACCGTCTATACAAGAAGTTAATATAGATGTAGAAATCAAGCATGAAACCGCTACATCTGATATGGAATATTTGAATGAAACAGATGAGCTAAAGGAAAATGATCTAACAGAGTTTATGACATCAGACAGAGAATACTCCACAGACGACAGCCTCCCCCTAGAGAAACAAAGACAAAAGAAGATTAAAAAAACTAAAATTGTCAAAGTCAAAAAGGTAAAGAAAGAAAAAGAGGCATTACCAAAGATAGATAGAAGGAGGAAACCGTTTTTGAATGATGAGCTAAATGAGACATTATTTACAATAACTGATTTGTCGTTTGATGAGCAAGTCGCTGAGATAAATAAAAGGCAGGACAGTGCTAATTATAAGAATTCAGTTTTTAAATGCACTGAATGTTATAAAGGGTTTTTGGATGAAGACGCTTATAATAGTCATATGACTAGGCATACTGATCAATGCGGCGAACACACATGCGACATATGCAAGACTCATTTCAAACATCCACACGCGTTGAGGAAGCACATAACCGCCCACCACACGCAGCGGTTCAGCTGCAACCAGTGTCCGTACGTCACCACGCACCGGCAGACGGCGCGGCTGCACGAGCGGTGGCACAAGGGGACCCGCTACCGGTGCCCGCACTGCCAGGACGAGTTCGTTAAATTCACAACATACATGGGTCACATACGCATCAAACACCCGTCGGACTTCGTGTGCGAGCTGTGCGGCTACTCCTTCGTCAGCGCGAAAGGAATAGAGTTGCATAAGAAGTTGAAACATCGTTTAGAAAGTGGGCAGATTCCAGATGACGGTCCGTTCTGCGAACAGTGCAATGTCAGATTTGTGTCAGCTGAGGCGCACAGGAGACATCTGTCTGTTTCAGCCAGACATTCCGCGACAGACAAGGACGGAAGAGACGGTAACAAACCAAAACGCGGTAGGAAGAGTAAGGAAATGAGAGAGAAGGACAGACGACCGCGCGAGAAAGAGAGCGACGATGAAAAGAGAAAGCTATATCCGAGCCAAATGAGGAAAGCCGAGGGGCCTATACCTTGTGAACAGTGCGGTATACAATTGGAAGACTCCCGCGCGTACCACGGCCACTTCAGGCGCGTGCACCCCGACAAGAACCGAACCAACTACCCTTCGATGAAGTCCCCCTGCATGTGCGAAGTGTGCGGCAGAATGTTTCAGAGTTACGCCCTACTAAAAGACCACCGTTGGACCCACACCGGTGAGCGTCCTTTCGCATGTGAGTCGTGCGGCAAGTCCTTCCGCATGCGGCAGCGGCTGGTGGCCCACCGCCGCGTCCACAGTCAGCAGAAGGCCACCTACTCGTGCGCACTGTGCGGGAAGCACTTCTCCACGCATAGCAATAGGCAGAGGCATATGTTTATACACACAGGACTGAAGCCATATAAATGTGAAATGTGCGGTAAAGGGTTCAAGCATGCTAGTGAAAAAAGAGCTCATATAACGTATGTGCACCTGAAGAAACCGTGGCCGAAGAGGACCAGGGGGAAACGGAGGGACGGCAGACAGGGTTCGATGGTGCAACAAGGATCGGGTGCGAGCGAGATGGAACTAGCTCAAGGCATGTGGCCTCCTTGCGATCCCAAACTAGGAGACATGAATTCGATTCTCGAAGACAAACCAATGTATTACAATTTGAAGATTTAA
Protein Sequence: MPYFPNESSLRTAWLRALSKEDWEPKERSAVCSEHFLCDDLYETKSGLRKVRVGAVPIIVQDATNCDYGEPASLKVCRICLVIGSKLFPIRKYKLEKAYEHLTGLSLCAEDKLPQKLCPECTQKLLNCSRFRNKSLRANSLMLEVIKKQDNLTITNIKTISRENNQLTSNLDAKHFDPDHCDMHIEFNEDIFKEPPSIQEVNIDVEIKHETATSDMEYLNETDELKENDLTEFMTSDREYSTDDSLPLEKQRQKKIKKTKIVKVKKVKKEKEALPKIDRRRKPFLNDELNETLFTITDLSFDEQVAEINKRQDSANYKNSVFKCTECYKGFLDEDAYNSHMTRHTDQCGEHTCDICKTHFKHPHALRKHITAHHTQRFSCNQCPYVTTHRQTARLHERWHKGTRYRCPHCQDEFVKFTTYMGHIRIKHPSDFVCELCGYSFVSAKGIELHKKLKHRLESGQIPDDGPFCEQCNVRFVSAEAHRRHLSVSARHSATDKDGRDGNKPKRGRKSKEMREKDRRPREKESDDEKRKLYPSQMRKAEGPIPCEQCGIQLEDSRAYHGHFRRVHPDKNRTNYPSMKSPCMCEVCGRMFQSYALLKDHRWTHTGERPFACESCGKSFRMRQRLVAHRRVHSQQKATYSCALCGKHFSTHSNRQRHMFIHTGLKPYKCEMCGKGFKHASEKRAHITYVHLKKPWPKRTRGKRRDGRQGSMVQQGSGASEMELAQGMWPPCDPKLGDMNSILEDKPMYYNLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00762080;
90% Identity: iTF_01437168;
80% Identity: iTF_01437168;