Hpyr009498.1
Basic Information
- Insect
- Habrosyne pyritoides
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_907165245.1
- Location
- OU015591.1:13407302-13422615[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-78 7.7e-74 249.1 13.9 1 270 123 392 123 414 0.88 2 2 1 2.4e+04 -8.0 14.2 1 148 412 463 412 485 0.52
Sequence Information
- Coding Sequence
- ATGGGGCATCGTTCTGAAGTGGCCACACCCGATAACAGTGATGAGGAGAGTGGTGAAGCCTTCACTGACGGTGATTTTGGAGATTCCGACGAAGAAACGATTGTAGACAATGCAGCCAAATCATCGCATATTCCGATCAATGAGACTGTAAACGAAGAATTGGGTAACATGAATGATTCCATAGATGTTTTGGACCAAGCTAATGGCACAGGAGATCACGCTAATGTTAACGGACATAAGAGCAGTGATAATGGACACTTAAATGAGTCTGAAGCCCACAGCCAAGCGAAGATGGAGTTTAGGAGAGATTCCCACGGTGATCAGAATCCATCGATCGTTGGCATTCTCGGTGACCAACAAAATCATGCGGAACAGCGGCTCGCGGCGAGGCGGGCGGCGCGGGCGGAGGCGCGCGAGATCCGCATGCGGGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCATATGACATGTATGCGGAAACGGTGGGGCGTCGCGGCGGCACCCGGCTGGCGGCCCTCAGCCCGGGGGTCGCACTCTCGCCGCGTCGGAGCTCAGAAGACTCTGCGGACGACGCCTTCAATGTCAAGGACCTTAGGCACGAATTGAAAGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCACAGCTGGACAATGACAAGGCGGCCCTCGGCTACCAGCTGGAGCTGCTCAAGGACCGGATAGAGGAGCTGCACGAGGAGTACGCGCAGCTGCAGCGGGAGCACAAAGAGAAATGCTCGGCACACGAGCGTTTAAAACGCGAACACGTAGCGTTGGAGCGCGAGGTGTCACTGGCGCGGGACGCGGTGCGCGCCCGGGACGCGGCCGCCGGCGCCGCGGGGTTCGCCTTCGTGGACGCGGGGGTCGCGCCGGGGCCTGAGGGCGTCGACGGGGCCGCGCCGACCCCGCCGGCCCCGGGGGGCATGCCCGCGCTCGCGCTCGTGTCGCATCACTCGCAGCAGCTGCTCGATGACGCCGGCGAAGGGACGTTGGACGTCCGGTTGCAGAAGTTGCTAGGCTCGAAACAGTCGCTAGAGTCGGAGGTCCGCAAGCTGAAGCTACAGCTGAACGAGGAGCGCGCCGCGCGACAGAACGGTGTGGCTAATCATCACGACCAGGAGTACGAGAACGAATTGGAGGGGCTGCGGCGCAGCGTGGCGGAGGCGAAGGCGCGGGCGGCGCGCGGCGAGGCGGAGGCGGCGCTGCACGCGGCGGCGGCGGCGCGCCTGGACGCGCAGCTCACGCGCCTGCGCGCGCGCCAGGACCACCAGGACGACCACGAGGAGCGCCTCAAGCACGAGCGCCGGAAGCTGCAGCGGGAGGCAAGAGAGGCCCTCAATCGAGTCGAGGAGCTGGAGACCGAGAACAGTCATTTGACGAAACGCCTCGACAAACTCAAGAACGCAAAATCAGCGCTCCTAAAGGACCTGTGA
- Protein Sequence
- MGHRSEVATPDNSDEESGEAFTDGDFGDSDEETIVDNAAKSSHIPINETVNEELGNMNDSIDVLDQANGTGDHANVNGHKSSDNGHLNESEAHSQAKMEFRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPGVALSPRRSSEDSADDAFNVKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHVALEREVSLARDAVRARDAAAGAAGFAFVDAGVAPGPEGVDGAAPTPPAPGGMPALALVSHHSQQLLDDAGEGTLDVRLQKLLGSKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELEGLRRSVAEAKARAARGEAEAALHAAAAARLDAQLTRLRARQDHQDDHEERLKHERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01437066;
- 90% Identity
- -
- 80% Identity
- -