Basic Information

Insect: Habropoda laboriosa
Gene Symbol: -
Assembly: GCA_001263275.1
Location: NW:122132-131618[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 4.8e-06 0.00027 20.4 1.0 1 23 218 240 218 240 0.98

2 29 0.0069 0.39 10.4 3.7 1 23 263 286 263 286 0.96

3 29 0.0001 0.0058 16.2 0.5 2 23 293 315 292 315 0.96

4 29 0.0023 0.13 11.9 0.6 2 21 337 356 336 357 0.92

5 29 0.0052 0.3 10.8 0.0 2 23 453 474 452 474 0.94

6 29 0.0023 0.13 11.9 0.6 1 23 480 503 480 503 0.92

7 29 9.1e-05 0.0051 16.4 0.1 1 23 564 587 564 587 0.96

8 29 0.018 1 9.1 0.4 1 23 593 616 593 616 0.96

9 29 0.047 2.7 7.8 0.8 1 23 629 651 629 651 0.97

10 29 2.7e-05 0.0015 18.0 0.9 3 23 695 716 694 716 0.96

11 29 0.00097 0.055 13.1 0.9 2 23 776 799 775 799 0.95

12 29 2.4 1.4e+02 2.4 0.0 2 23 808 830 808 830 0.84

13 29 0.067 3.8 7.3 0.1 2 23 837 859 836 859 0.95

14 29 1e-05 0.00057 19.4 1.2 1 23 867 889 867 889 0.98

15 29 1.5 83 3.1 0.6 3 23 917 939 915 939 0.83

16 29 0.00016 0.0091 15.6 3.3 1 23 942 965 942 965 0.97

17 29 0.00032 0.018 14.6 0.3 2 23 972 994 971 994 0.96

18 29 0.0007 0.04 13.6 3.9 1 21 1018 1038 1018 1039 0.95

19 29 0.0021 0.12 12.1 1.8 2 23 1053 1074 1052 1075 0.93

20 29 0.82 46 3.9 0.9 1 23 1078 1101 1078 1101 0.92

21 29 0.0092 0.52 10.0 1.0 2 23 1108 1131 1107 1131 0.92

22 29 2.3 1.3e+02 2.5 0.2 2 23 1139 1161 1139 1161 0.94

23 29 0.17 9.8 6.0 2.7 2 23 1199 1221 1199 1221 0.96

24 29 1.3 75 3.3 0.1 2 23 1227 1249 1227 1249 0.95

25 29 5.6e-05 0.0032 17.0 0.2 1 23 1312 1335 1312 1335 0.96

26 29 0.073 4.1 7.2 3.5 1 20 1360 1379 1360 1381 0.93

27 29 0.38 22 5.0 1.3 2 23 1478 1500 1477 1500 0.94

28 29 0.22 12 5.7 0.2 2 23 1507 1529 1506 1529 0.94

29 29 3.7 2.1e+02 1.9 2.6 1 23 1540 1562 1540 1562 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	4.8e-06	0.00027	20.4	1.0	1	23	218	240	218	240	0.98
2	29	0.0069	0.39	10.4	3.7	1	23	263	286	263	286	0.96
3	29	0.0001	0.0058	16.2	0.5	2	23	293	315	292	315	0.96
4	29	0.0023	0.13	11.9	0.6	2	21	337	356	336	357	0.92
5	29	0.0052	0.3	10.8	0.0	2	23	453	474	452	474	0.94
6	29	0.0023	0.13	11.9	0.6	1	23	480	503	480	503	0.92
7	29	9.1e-05	0.0051	16.4	0.1	1	23	564	587	564	587	0.96
8	29	0.018	1	9.1	0.4	1	23	593	616	593	616	0.96
9	29	0.047	2.7	7.8	0.8	1	23	629	651	629	651	0.97
10	29	2.7e-05	0.0015	18.0	0.9	3	23	695	716	694	716	0.96
11	29	0.00097	0.055	13.1	0.9	2	23	776	799	775	799	0.95
12	29	2.4	1.4e+02	2.4	0.0	2	23	808	830	808	830	0.84
13	29	0.067	3.8	7.3	0.1	2	23	837	859	836	859	0.95
14	29	1e-05	0.00057	19.4	1.2	1	23	867	889	867	889	0.98
15	29	1.5	83	3.1	0.6	3	23	917	939	915	939	0.83
16	29	0.00016	0.0091	15.6	3.3	1	23	942	965	942	965	0.97
17	29	0.00032	0.018	14.6	0.3	2	23	972	994	971	994	0.96
18	29	0.0007	0.04	13.6	3.9	1	21	1018	1038	1018	1039	0.95
19	29	0.0021	0.12	12.1	1.8	2	23	1053	1074	1052	1075	0.93
20	29	0.82	46	3.9	0.9	1	23	1078	1101	1078	1101	0.92
21	29	0.0092	0.52	10.0	1.0	2	23	1108	1131	1107	1131	0.92
22	29	2.3	1.3e+02	2.5	0.2	2	23	1139	1161	1139	1161	0.94
23	29	0.17	9.8	6.0	2.7	2	23	1199	1221	1199	1221	0.96
24	29	1.3	75	3.3	0.1	2	23	1227	1249	1227	1249	0.95
25	29	5.6e-05	0.0032	17.0	0.2	1	23	1312	1335	1312	1335	0.96
26	29	0.073	4.1	7.2	3.5	1	20	1360	1379	1360	1381	0.93
27	29	0.38	22	5.0	1.3	2	23	1478	1500	1477	1500	0.94
28	29	0.22	12	5.7	0.2	2	23	1507	1529	1506	1529	0.94
29	29	3.7	2.1e+02	1.9	2.6	1	23	1540	1562	1540	1562	0.92

Sequence Information

Coding Sequence: ATGGAGCCCAGGGAACGCTACCAGGAGCTCTGCAGACTTTGCGCATCCTACGACGCCGTCAAGATGGACATTTTCGGTCAAGAGGGCAAGAACAGACAGCTCGTTGACAAGATACAAGCTTGTCTGCCGTTTAAGATTGCAGAAGATGATAGACTACCAAAATGCCTATGTTACCGCTGTATGtacaatttggaaaatttctatgATTTTAGAACAGCGTGTGTTAATGCAGTGGCCCTCTTGGAAAGGTGTTTACCACCTTCAGAattgAATGGAGATGTTACAACCACATTGACATATTATAATGATTCAGAGCTCTTTAAGGCAAAAGAGAGTATACCAGTATTGATTCCAGAGGCTCCAATTGTAAATCCAAATGCTGCCTTAGGCACACCACCCAGATTAAATTCTGATGGGGAAGCTGATCatgaaacagaagaaattgtTGATAACAGTGGTACAGATGAAGCAACAATAGTAGATGATTTTGAAGATCGTCGTTCAGAAGAGTATGAAATGGATATGGAAACAAATCCAAGTGACTTTTTAGAAATGACTTCAATGGTTACAGAAGAACCTGAAGAATCACAATTGAGACATCAGGAACTTTCCAGTAATTTACCAGAGCACACATCTCAACAGCATGAAGTATATGTTTGTTCCTTGTGTAACAAAGCATTTAGTTCAAAAGGTCATTTGTCTTTACATGCACGTATTCACGTGGGCGCTGGTGATGTGATCGGTGAAAAAGTTCTTACAGATGATCATACATCCTATAAAAGACCCTATCAATGTGATCTTTGTCATAAATCATATTCTACGGCGAAACATCGTTGGGGTCATGTTTCTACAACTCAtagAGGCCATCCGGCAGTGACATGCGGTTACTGTTCCCGGATCTATTCAACCCGAACAAATTTAGAAGAACATATAAAATCGCGTCACGCTGGTCTTCCAGCACCTACAGAGGTTGCAATGAACAACATCTATCGTTCGGAAAATAGATGTCAATGTAATGTATGTGGAAAGATTTGCACGGATGCCATGGAATTGAATCTTCATGGTAGGATTTGTGCTGAAGGACAGAGATTGGATCATCCAGGGAAAAGTGAGAGTAGGGATAATAAAATCGTGGATAGTTCTGAAGCTTCAAGTATCGGTAGTGACGATGATggcaaaattttatcaaaTGCAGAAGCTAAATTAGCTAAGAATCCTCAGTTGACAATTTTAAAACAAGCATTAACGAAAGGAGATAGCCTTAAACGAGATTTTGAAGACAAGTTTACAACAAATTGTAAACCTCAAAAGCTACCGAAAACAgAAAACACTAATATTCAAAACACTAAAAAGTGGTACTGTGAATCTTGTCCTCAGTCTTTTACTTCAGTTGAGGATTTGAAAGAGCATGAAGCAGTTCATGATGCTGATAAGCCATACATTTGTATTCTATGTAAAAAAGATTTTGTCCTGAAGTCTTCCTTAAGCAGGCATATTCAAACATTACATGGTGTTGATCCACTACCTATAGTAGAAAGTGATAAAtgtctaaaaaaaattctttcacaaaATTGGAATGAATCTATGGAAAttgatttgtattttttttttttttttttgtagataaATGCAGAAAATGAAGACGATCATGAGAGTGGACAAGAAAATCTCattgaaattgaaactgtatttgtttgtgaaatttgtaCTCGCGATTTTAATGATCGTGCTTCTCTTTGGCTTCATATTCGAGCTACTCACAAAGAATTTGCGGCATTTGCATGTGgcgtttgtttaaaaatttgtgcaGATAATACACAACTTTTGAATCACGTAAATATGTACCATGGCGGTTCAAAATTACTACTTTCTGAACAAAGAAGGTATAGTTGTACCATATGTGGCAGACAACATGATTCTAGAAAAAAGTTAATTGCACATGTGTCTATACATAATGTGGATCCAAATTATGATCCTGCAACTTTTGTTCAGTTGAACAGTAATTATTATGGAGAGAATATTAATGGCAATGAAACAGCAGAACAAATGCTTGATTATGAGGAAGATGGAGATAAAGTGGATTGTTATATTTGTTATAAATCATTTCCTAATGAAGATCATTTAATACGACATCAAAGAAATGCACATAGGtCTGAACAACTAGTGCCAACAGGAGATTCTTTAAATCCATCGAGTTTAAATGGTGGTGGAAATAGAGCTCAATATCATCTCTTTTTTGTTTGTGAACTTTGTGGTAGTTCACATCCTAGTAAATGGGAACGTTGGTTACATGTTAGTTCTTCTCATAGTAATGAACCAGCTATAAAATGTGATCGTGAAGATTGCGGTAAAATCTTTGCCACAAAATCTCTTAGAAACGAACATATTCAACATCACGCAATTCAAGGCTCGTCCCCAAATACATGTGAAATTTGCGGTAAGCTTTGGGGCAGTAGAGTTGATTATTGGAAGCATGTTATGGGTGTTCATTCGGATACTGTTCCATTGATTTGTGGTGTCTGTCTAAAAGTGTTTCCAAATGTTTTACAATTAAGTACTCATGTCAAATCGAAACATTGGCCGTTAACAAATGGTGATTTTAGTTGTGACATTTGTGGTAGACCATATTCGAATAAATCCAAAATGTCTAGACACAGAAAAATTCATGGTTTTGAAGAGAGTTGCGACAACGGAGCAGAAAATAACGAGAACAAAGTAGACGGACGAATGAGAGAAACTGAATTAAGTTGTGAACTCTGTGCAGATTTAATGTTTAAtagtttagaaaaattgtgcaatcACAGGCGAATTGTTCATGGACTTTTCCCTTGTGATCTCTGCAACAAATGTTATGGAAGAACTTCACATCTGTGGAAACACGTAAATAGAGTTCACAAAGGACATGAAGATGTAACTTGTCCTTATTGCTTAAAAACTAGTGCATCAAAAGATCATTTAGCAGcacatatttcaaaaattcatagATATGAACCTGATTCCAGAAAAGATGGAAAAGATAATAGACAATTTAAAACTGAAGAAGTTAGTTTACATTATtgcgaaaaatgtaataaaggATTCCACAAACGATATCTTTTACGTAGACATATGAAGGGATGTCAGAACTACAGGAAAGATCCTGGAGCATTATTAACAAGATGTAGAGCTTGTGAAAGAATATTCAAAGATCGCGCTAGTTTACAAAAACATATTGAGAATCATCATAGCACATACACGTGTCATCTTTGCAATGAGACAATTATCTCAAAACTAGGAATTATGACACATAACAGAGTGAAACATATGGATCATCCAGATTTAACTTGTAATTTTGGATCTTGTAAGAAGTTATTCAGAACGAAGGAAGATTTAGAGGCCCATAAAAAGGATCACAGGTATCATACAACTCCTAATGTCTGTGACTTCTGTGGTGATACTGTTGAGAATAAACTTAAATTAAAGATGCATGTGTTGTCTCTTCACCGCAATGAAATTGGTGTTTCTTGTGGAGTGTGTTTAATTCCAATGAAGGATCCGAAAGAACTTAAAGGCCACGTAGAAGAAGTCCATTCCGGTGTCCTCTCAAAACCTAATACATGTCAAGTTTGTGGGAAACAGTATGCCTCAAAATGGAAAGCTTTCGATCATACTAAAAAGTGTCATGGGAAAGTATTTAGGACCTGTAAACAATGTTTAGCTGTTTTTACTGAGGATTCTGCAATTCGGGATCATTATGAAACAGTACATAATATTTCCAAAGATCAGCTTGCTGCATTTGAATACAGATTAGATATCAGGtcgaaaaatgaagattttgaAGTAGAGTCTCCCGATATAATAGTTAAAGAAGAACCGGAAGATTTGGAATACGATGTAGATATCTGTGATGAGGATTCTAGCGattcaaaaagaagaaggtcTTTAACAGATACCTTTGACTGTGAAATGTGTCCTGAAATGTTTGTGAACAGTGATGCACTTTCAAAACATTatcgaaacatgcataatacaGATCCAGAAAGAATGTTTAAAAGGTTAAAACAAGATGAACAAAGAAGAATGCGTGGAAAAATGAACTTCTTTTGTAAGAATTGTAAAAGACAATTTTGCACGAAAACAATGTATTGGAATCATGTTGCAAATTGTAGAAGGAATATTATGCGGAAAGaaGAAGAACTTTTACCTTTACGGTCTGACATGTTAAGTAATCGGGAagaacttttgaaaaataataatcaaattaaaaaagaagaacctACATCTAATTTGAATATACCTGATTTTAATCTCTTTGAAGATATAAATCTTCAACTGTCAGGTCAGAGACCACTTCCAAATCTTATGCCGCTCTCTCAAagAGCGAAATCAACAATGAAATGTTCAAGAAAGGATTCCAGGAAAGTATATGATGAATCAACAAATACAGAATGCGCTTGTGAAGTGTGTGGAAAACAATGGCCAGCAAAAAAACACTTATGGCAACATCTAATTCGTTTCCACCGAGCAGAAGCGGCAGTTACTTGTGGAGTGTGTTTAAAACTTTGCAAGGATTATGATGATTTGGCTGAACATTTGAAAGCTGCGCATGAAGCAATACTTTCATGTGAAGGAAACAATTTTACTTGCAAAACTTGTGGCAGGTATCATAATGCACGTAGTAAATTGTTACTACATACAAGTATTCACATTGGACATGCAGGTAACAGCACTTGGTGTCCAAAGTGTAGGAAAAATATTACTGATGAAGCTGCTCATATAAATAATTGTCTTGGGAAGACAGAAGACGAAGAaccattgaaaaataatgagaaaGTAGAAgAAAGTCTAATAGCGGATGATACGATGATtgaagaagtagaagaaggAGATTTTGAATCAGAAGCAGAAGAAGGAGACACAGAAGAATCGGAAAGTGGTAGTAGTACCgaagttgaagaagaaaatgagtCAGAGGGTGAATCTAGAGCAACGGGGGAAATTACTTACAATTCAGAAAGTGAAGATTCCGAAGATTTAAATTTAGAGATTGAAGAAAAGAGCATGCAACGCTATACTTTGGAACACCTTCAGGAAACCAAAAATGCAGaaacagtaaaaaatacAGATGTATCGGACGACGATGGACCTCCAGTTCTCAGCCCTATAATGCCTTTGCTTCCTGAAAATATGTCTGTAGGACAGACATTGGGCCATAAACTTGTTTCTATAGTATCTCTAACTggaaaagaaatgcaaatacGTAATCTCTCAGAGATTCGAAATCAATCTTCTCCAAAATCAGTAAATCTGTATGAAAAACGTTTAACTAATAATGAATCCTTGGATTTTGAATCGGAAACATTTATAAATCGAAGCGACGAAGACTTTGAAGAtacaaaaaatgaatttgatgaaaattctATTGAAGAAAATGAGGATAATGAAGAGATCGAAGAAAATGACGAATACGAGAATgaagaaaatgtggaaaatgaaaatggagATATTGAAGACATTGAGGAAAATGAAGAGATTGAAGAGAATTATGACATTGagaagatagaagaaaatgagaataaTGATATCGAAGAAGTTgaagaggacgaagaaaatggagaatttgaaggaacagaagaaaacgaaagaaatgaagaaattgagCAGGTGAACGTCGATAAAAGAAATGACGAAATCGATGATACAGACGAGCACGAAGGACAtgatgaaattgaagaaacagaAGACAGTGAAGGAAATgaagagagggaagaaaacaTGCAACTGGATGATCTAGCAGGTGCTGTTTTAAtggtagccgaaggagatcAAATACTAATTCCGCAAGGAATGTTGgaagatgaaaatgaaacttcaaGTCAAGAATACGTTTATTCTACATTTAGGTACAGTACAGAAGAGGACAGTGACGATGCAAGGAAATGA
Protein Sequence: MEPRERYQELCRLCASYDAVKMDIFGQEGKNRQLVDKIQACLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPPSELNGDVTTTLTYYNDSELFKAKESIPVLIPEAPIVNPNAALGTPPRLNSDGEADHETEEIVDNSGTDEATIVDDFEDRRSEEYEMDMETNPSDFLEMTSMVTEEPEESQLRHQELSSNLPEHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVLTDDHTSYKRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRTNLEEHIKSRHAGLPAPTEVAMNNIYRSENRCQCNVCGKICTDAMELNLHGRICAEGQRLDHPGKSESRDNKIVDSSEASSIGSDDDGKILSNAEAKLAKNPQLTILKQALTKGDSLKRDFEDKFTTNCKPQKLPKTENTNIQNTKKWYCESCPQSFTSVEDLKEHEAVHDADKPYICILCKKDFVLKSSLSRHIQTLHGVDPLPIVESDKCLKKILSQNWNESMEIDLYFFFFFL*INAENEDDHESGQENLIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICADNTQLLNHVNMYHGGSKLLLSEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPNYDPATFVQLNSNYYGENINGNETAEQMLDYEEDGDKVDCYICYKSFPNEDHLIRHQRNAHRSEQLVPTGDSLNPSSLNGGGNRAQYHLFFVCELCGSSHPSKWERWLHVSSSHSNEPAIKCDREDCGKIFATKSLRNEHIQHHAIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSTHVKSKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGFEESCDNGAENNENKVDGRMRETELSCELCADLMFNSLEKLCNHRRIVHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCPYCLKTSASKDHLAAHISKIHRYEPDSRKDGKDNRQFKTEEVSLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETIISKLGIMTHNRVKHMDHPDLTCNFGSCKKLFRTKEDLEAHKKDHRYHTTPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKELKGHVEEVHSGVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTEDSAIRDHYETVHNISKDQLAAFEYRLDIRSKNEDFEVESPDIIVKEEPEDLEYDVDICDEDSSDSKRRRSLTDTFDCEMCPEMFVNSDALSKHYRNMHNTDPERMFKRLKQDEQRRMRGKMNFFCKNCKRQFCTKTMYWNHVANCRRNIMRKEEELLPLRSDMLSNREELLKNNNQIKKEEPTSNLNIPDFNLFEDINLQLSGQRPLPNLMPLSQRAKSTMKCSRKDSRKVYDESTNTECACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKDYDDLAEHLKAAHEAILSCEGNNFTCKTCGRYHNARSKLLLHTSIHIGHAGNSTWCPKCRKNITDEAAHINNCLGKTEDEEPLKNNEKVEESLIADDTMIEEVEEGDFESEAEEGDTEESESGSSTEVEEENESEGESRATGEITYNSESEDSEDLNLEIEEKSMQRYTLEHLQETKNAETVKNTDVSDDDGPPVLSPIMPLLPENMSVGQTLGHKLVSIVSLTGKEMQIRNLSEIRNQSSPKSVNLYEKRLTNNESLDFESETFINRSDEDFEDTKNEFDENSIEENEDNEEIEENDEYENEENVENENGDIEDIEENEEIEENYDIEKIEENENNDIEEVEEDEENGEFEGTEENERNEEIEQVNVDKRNDEIDDTDEHEGHDEIEETEDSEGNEEREENMQLDDLAGAVLMVAEGDQILIPQGMLEDENETSSQEYVYSTFRYSTEEDSDDARK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00218574;
90% Identity: iTF_00118156;
80% Identity: -