Basic Information

Insect: Habropoda laboriosa
Gene Symbol: Hr39
Assembly: GCA_001263275.1
Location: NW:2860183-2876251[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 3 9.7e+03 -5.8 7.1 119 160 51 92 23 128 0.58

2 5 2.5 8.2e+03 -5.1 9.8 43 165 270 385 260 410 0.54

3 5 1.4 4.4e+03 -4.2 5.4 73 132 402 463 381 499 0.59

4 5 1.9e-08 6e-05 21.7 0.1 1 24 568 591 568 641 0.80

5 5 6.4e-71 2.1e-67 227.5 0.1 187 408 729 946 716 946 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	3	9.7e+03	-5.8	7.1	119	160	51	92	23	128	0.58
2	5	2.5	8.2e+03	-5.1	9.8	43	165	270	385	260	410	0.54
3	5	1.4	4.4e+03	-4.2	5.4	73	132	402	463	381	499	0.59
4	5	1.9e-08	6e-05	21.7	0.1	1	24	568	591	568	641	0.80
5	5	6.4e-71	2.1e-67	227.5	0.1	187	408	729	946	716	946	0.95

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGACCCAGCGAGGGTCCAGGACCAGGCCCGGGGCCGGGTCCTGGTTGGTGGCCAACTTCCTCGCAGTCCTGGAAGACAAACTCCTGCTCCGCCTCCTCGTCCGCCAGTTCTGCCGGTTCCGCCGCTTCAGACAACTCCGCCTCCGTCTCTGCGTCCTGCACCACATCTACCTCCTCTCTGCCGACCACCACTTCGGCCACTTCCTCGACCAGCTGCTGCTCCTCGACTCCTGCCAGCGGACCTTCCTGCACGATCACCGCGGCCCGTTCCTCCGAGACGGGGAAAAATGTTTCTGTCACAACAATCAACGTTCCCCCTAATCAGGATATACACGACAGTGAAAGCACAAAATATCTTGCTGGGCAAAATGGCGTGACGGTATCCGTAGTTTCGAACTGTGCCTCTGTTCCGGTGAATGTACTGAACCAAAATGCCGCCGATGAAGATGCGGAGGACAGTGACGTCGAGATAAGCAAAATCGACTTCCGAGGAGTAAATTTGCgcacgaagaagaaacgagatGATGGAAGCGGTTGCTACGATGGGAACGACGTGTCCCAGCAACAACCTGAAAGACCCATGTCATGGGAAGGAGAACTATCCGACCAAGAAATGTCTTCCAATACAATTACGAATCAAGATACACACGAGGACACATCAATGGAGGGCGTCCAAGTATGTGGCGCGAGTCCTGGGCCCAtggaacagaaatttcccatAAAACCAGAACCTGATTTCCGATCCAGCCCGGGGTTTGCATTCGGTTCTTTCCACGACGCAGGATTACCCATGGCTCATGGCCAGCAGAtgcaacaacagcaacagcagcaacaacgTAACATCGAGAATCTTGAACAGACGCAGCAGAATGATTTGCCCCTTCTCGTAGGAAAACTACTCGGTGGTGGTTACAATAGTTCAACTCCAAATCACAGTCCAGTGTTAAATCCAAGACATCATTTGACTAAACATAGCCACACAAGATCACAGGTGCCGTCACCGGACTCTGCAATTCACTCCGCATACAGTGTATTTAGTTCACCGACGCAGAGTCCCCATGCAGCTCGTCACTCTGCTCTAGGAGCAGGAAGTCCAGTTCCGTCTTCGTCGTTATCCCTTTCGCGACATAGCTTCAACAATTCCACTTCTTCGTTATCATTATCATTGTCACATTCACTCTCGAGGAATAATTCTGACGCCTCGAGTAGCTGCTACAGCTACGGTTCTCTCAGTCCACCCACGCACTCACCCGTCCAGCAACCTAGACATCCGCAGCATCATCAGCATCAGGTGGCTCAGGGAAGTCCTCTCCATCTACCTGCAACGGCTTCGCCTGCCATTGCTCATCATTATTCTTCCTCTGCGCCGGGTTCTGAGCTGTCTGCCGAAGGACACGTTGCTACTGACGATCAGGAAGACTGTCGTATACCATCAGCGCCATCCGGCATTTCTACCAGACAGCAACTGATCAATAGTCCGTGTCCAATTTGCGGAGACAAGATCAGCGGTTTTCATTACGGTATTTTCTCCTGCGAGTCGTGCAAAGGATTCTTCAAACGCACCGTCCAAAATCGGAAAAACTATGTGTGCCTTAGAGGCGCGGGCTGCCCGGTTACTGTAGCTACCAGGAAAAAGTGCCCCGCCTGTCGCTTTGACAAGTGCCTCAATATGGGTATGAAGCTCGAGGCGATTAGAGAGGATCGCACCAGAGGTGGAAGAAGTACCTACCAATGTACGTACACCCTTCCAGCAAGTCTCGTTGGTAGTCCTGCAAACAGTATGGCCAGCGACAAGTTAGCCACAGGGGGAAATTGTAGCCCAGCTCCGCCTGGTAGCGAATATTACTATCCTGCTAGGCATCATTCGAATCATTCGCATAAAATGCAGGTGGTGCCGCAACTTCTACAAGATATCATGGACGTGGAACACTTATGGCATTACAACGATAACGATCGTATGTCCGGGATTCAGGCTGGAGCAACAAATGCTACGCGAAACAACGATACAATGTTATTAGGAGTTGGAAACGGAGGAGGACCCGGAATAGGAAACGACACAGGTTCGGTAGTTGAATGTCCTACTAATGGAACCGCAGGAAACGGAAATCCTACCAGTAGAAGAGACGACAGGTCGTGCTCTAACGTATCTGCTGTCGGTAACGAACAACGAGCTACGCCTATTAATAGTAATTCTCAAATGGGTAACAATTCAAATGGCAACTCGACCCAGCATCCTGATTTTCTGTCAAACCTTTGTAACATCGCTGACCATCGCCTCTACAAAATAGTGAAATGGTGCAAGAGTTTGCCGTTGTTTAAGAACATTTCGATCGACGATCAAATCTGCCTGTTAATCAATTCCTGGTGCGAGTTACTGCTCTTCTCGTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATCAGAGTATCTCTCGGCAAGTCGATCACATTGGAACAAGCTAGACAGCTTGGTTTAGCGACCTGCATCGAGAGGATGCTCGCATTTACTAACAATCTGAGAAGGCTCCGAGTAGATCAGTACGAATACGTGGCGATGAAGGTAATAGTCCTGCTGACTTCTGACACAAGTGAATTGAAGGAACCTGAAAAAGTTCGAGCATCTCAGGAAAAAGCTTTACAAGCATTACAACAGTATACCATAGCAAGGTACCCAGAGATGCCTGCCAAATTTGGTGAATTACTATTGAGAATTCCAGATTTACAAAGAACATGCCAGGCAGGAAAAGAATTGCTAAGTGCAAAACGCGCCGAGGGGGAAGGTAGTTCGTTTAATTTGTTGATGGAATTATTGAGAGGAGATCATTGA
Protein Sequence: MSEQNGPSEGPGPGPGPGPGWWPTSSQSWKTNSCSASSSASSAGSAASDNSASVSASCTTSTSSLPTTTSATSSTSCCSSTPASGPSCTITAARSSETGKNVSVTTINVPPNQDIHDSESTKYLAGQNGVTVSVVSNCASVPVNVLNQNAADEDAEDSDVEISKIDFRGVNLRTKKKRDDGSGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPMEQKFPIKPEPDFRSSPGFAFGSFHDAGLPMAHGQQMQQQQQQQQRNIENLEQTQQNDLPLLVGKLLGGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPATASPAIAHHYSSSAPGSELSAEGHVATDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPANSMASDKLATGGNCSPAPPGSEYYYPARHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMSGIQAGATNATRNNDTMLLGVGNGGGPGIGNDTGSVVECPTNGTAGNGNPTSRRDDRSCSNVSAVGNEQRATPINSNSQMGNNSNGNSTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00733987;
90% Identity: iTF_00761032;
80% Identity: iTF_00761032;