Hlab004713.1
Basic Information
- Insect
- Habropoda laboriosa
- Gene Symbol
- lola
- Assembly
- GCA_001263275.1
- Location
- NW:340953-343073[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-07 0.00028 19.7 0.0 2 38 200 236 199 242 0.84 2 4 3.2e-11 3.9e-08 32.0 0.0 5 39 253 286 250 293 0.85 3 4 0.075 91 2.0 0.0 21 34 320 333 306 338 0.80 4 4 2.8e-12 3.4e-09 35.4 0.1 4 39 364 399 361 404 0.93
Sequence Information
- Coding Sequence
- ATGTCCGAGATTGCTAACCAACATGAGATTAATCAGAGCTACTGGTTTAAATGGAATGATTATCAAAACCATCTATCCGATGTAGTTAGACAACTTTTGGAGGAGGATTGTATGGTGGATGTTACTCTGGCTGCTGCTGGAGAACGTATTCATGCTCATCGCATAGTTCTCTGTGCTTGCAGCACTTTGTTTCGAGAAATATTGAGTCAAGTAAATGAAGATCATCCAACGATAATATTAAGCGATATATCTGCTCAAGATATAAAATCTATCATAGAATTCACTTACCATGGAGAAGTAAGGGTCCCAGTTGAGAATATCAGTAGTTTATTAGATGCAGCACgttcattaaaaatttgtgGTCTCATTGAGATCGATGGACTTGATGAAAGTGACTCTATTGCGAGCACTAAAGattttaatgataataatgaGGAGCCAATGACTGTAATTAGTGAGagtgaagaaaatgttattaataCATTGCAACATGGTTATGAAGATTTAGAGGACCAACAAAAACAAGAGAtcattgaaaattccatttcacataaaaaaaagaaacgtagaCGAGACACAACGAAAAGAGATTATAGTGATGATATGCTAGCGTCGGCAATTAATGATTTAAAGTCTGGTCAAACATTGATAGAAGCTTCTACTAAACATAACATACCGCGTTCGACTTTGTACATGCGTGCTAAAGCATTAGGTATACATTTGAACGCATCGAGAAATGAGTATCCCGCGGAATGTATGAAGGCTGCTATAAATGCGGTAATTGGTGGATCAAGTTTGCAACATGCATCAGAAATGTTTAGTATACCCAAAACTGTCTTATGGAGAAGGATTCAGAAAGAAGGGTATCAAATATTACGTTCTGAAATGAAACGGTCTTATGGTTCTGATAAACGAGAAGCTGCAGTTAAAGCTCTAGAAAGGGGAGAGAATTTAACCAAAGTTGCACTTGAATTCAAAATTCCAAAGACTACTTTATTTAGAGATAAAGCTCGATTGGTAGACGAGGGAAAACTACCATTATCATTTTGGAAAAAGCGTAAAACGGAAAATGAAGAGTTAAAAAAATCTCGTTTAGAAGAAGCTGTTGCTGCTTGTAAAGGAGGAAAAATGTCACAAGCAGCAGCGTCAATTACTTATCATATTCCAAAGACTACTATATGGAGACGCCTTCAACAAGACGGCAAAAAGTCAGAGCGTTCATTAAACTCAAAGAAGCAAAGAATAACGGATTCTAAACATAATCCGGAAGCGAAGGTAGAAGAAGGATCTGATTTCACATATTGCGAGGTTTCATCGGAAATTCCTATAACTTACATAGATGAAAATAGTATGCCTGAAGATTctgtaataatattaacagCAGAAGATGTGGACGGGCTTAATTTAGAAGAAGGACgacaaattattgttaattcagAATCAGGACAAGAGTATGTACCTTGCGCTATAAGTATtgaggaaaattcaaattattcacaGACAGAAAGTTAG
- Protein Sequence
- MSEIANQHEINQSYWFKWNDYQNHLSDVVRQLLEEDCMVDVTLAAAGERIHAHRIVLCACSTLFREILSQVNEDHPTIILSDISAQDIKSIIEFTYHGEVRVPVENISSLLDAARSLKICGLIEIDGLDESDSIASTKDFNDNNEEPMTVISESEENVINTLQHGYEDLEDQQKQEIIENSISHKKKKRRRDTTKRDYSDDMLASAINDLKSGQTLIEASTKHNIPRSTLYMRAKALGIHLNASRNEYPAECMKAAINAVIGGSSLQHASEMFSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFKIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVAACKGGKMSQAAASITYHIPKTTIWRRLQQDGKKSERSLNSKKQRITDSKHNPEAKVEEGSDFTYCEVSSEIPITYIDENSMPEDSVIILTAEDVDGLNLEEGRQIIVNSESGQEYVPCAISIEENSNYSQTES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00118108;
- 90% Identity
- iTF_00963105;
- 80% Identity
- iTF_00761072;