Gfla009135.3
Basic Information
- Insect
- Gortyna flavago
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963669345.1
- Location
- OY770132.1:18257995-18264511[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.8e-58 5e-54 184.4 3.1 20 221 1 203 1 205 0.94 2 3 1.4e-16 1.4e-12 48.3 6.2 200 296 208 296 204 300 0.78 3 3 0.53 5.5e+03 -2.9 6.9 130 166 329 365 310 374 0.56
Sequence Information
- Coding Sequence
- ATGCGTGAGCTGGAGAGGCAGCAGCGCGAACAGGAGGACCATGCCGACAAGGCATACGATATGTACGCCGGCAAGACACCAGAGACGGTGGGTCGTAGAGGCGCTACGAGGCTGACGGCGCTCAGTCCGGCCGTGCACTCACCGAGACGAAGCTCTGAAGACTCCGTTGATGATGGCTTCAGCATCAAGGACCTTAGGCATGAGTTGAAGGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAATGACAAGGCCGCGCTCGGCTACCAGCTGGAGCTGCTGAAGGACAGGATAGAGGAGTTGCACGAGGAGTACGCGCAGCTGCAGCGCGAACACAGAGAAAAATGCTCATCATTCGAGCGTCTAAAGCGGGAGCACGAGTCAGTAACTCGCGAGCTGAGTGCGGCACGAGACGCCGTGCGAGCGCGAGACGCGGCCGCCGCCAGCGCGGGCTTCGCCTTCGTCGACGCCGCGGCGCTGGACGCGGCCGCGCGGGACTGCGCGGGCGCCGCAGTGGGCGCCGTGCCTGCGCTGGCGCTGGTGACGCAGCAGGCGCACCAGCTGCTCAGTGATGCCGGGGAGGGCACGCTCGTAGGCGCCGTGCCTGCGCTGGCGCTGGTGACGCAGCAGGCGCACCAGCTGCTCAGTGATGCCGGGGAGGGCACGCTCGACGTGCGGTTGCAAAAGCTGTTAACCTCGAAGCAGGCGCTGGAGTCAGAAGTACGCAAGTTGAAACTACAGCTGAATGAAGAACGCGCCGCCAGACAGAACGGAGTCACTAACCATCACGACCAAGAGTACGAGAATGAACTGGACACAGTCCGCAAGGCGGCGGCGGACGCGAAGGCCCGCGCGGCGCGCGCCGAGGCGGACGCGGCGCTGCaggcggcgcaggcggcgcgccgGGACGCGCAGCTGGCCCGCCTGCGCGCGCGCATGCTGCTGCAGGACGGCCACGAGGAGCAGCTCAAGCAGGAGCGGCGCCGGCTGCAGCGAGAGGCTCGGGAAGCACTCAATCGGGTTGAAGAGTTGGAGACTGAGAACAGCCACCTCACGAAACGACTCGACAAACTCAAGAACGCGAAGTCTGCGCTCCTCAAAGACCTGTGA
- Protein Sequence
- MRELERQQREQEDHADKAYDMYAGKTPETVGRRGATRLTALSPAVHSPRRSSEDSVDDGFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSFERLKREHESVTRELSAARDAVRARDAAAASAGFAFVDAAALDAAARDCAGAAVGAVPALALVTQQAHQLLSDAGEGTLVGAVPALALVTQQAHQLLSDAGEGTLDVRLQKLLTSKQALESEVRKLKLQLNEERAARQNGVTNHHDQEYENELDTVRKAAADAKARAARAEADAALQAAQAARRDAQLARLRARMLLQDGHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041796;
- 90% Identity
- -
- 80% Identity
- -