Gpyl025899.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Glyphodes pyloalis
Gene Symbol
-
Assembly
GCA_037074685.1
Location
JAYKKO010000031.1:117493-119763[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-14 1.3e-11 44.9 0.0 2 41 11 50 10 53 0.93

Sequence Information

Coding Sequence
ATGAATGATAAGAAAAGATTAAAGTATTCGCAGGAAAATATGGAGAAAGCACTACGAGATATACGAGAGAAGAAAATGAGTATAAATCAGGCTGCAAAATCATACGACATTCCAAAAACAACGATATTAGACAGATTAaaagacaaatataaaaattcagGTAACATAGGCGGTCCAACTGTACTGACAAGCTCAGAAGAAATGTATCTGGTGAAATGGATTTTAGAATTGGGCGAAGTCGGTTTTCTGATAACGAAGACTCAGTTACTGGATTCTGTcactaaattaattaagattttaggCCGTCAAAATCCTTTTAAAGATGACCAGCCGGGTAAGAAATGGTATAATGGCTTTCTTGCTCGCCACCCGGAAGTTTCGAAAAGAGTTCCACAATCTCTCACAACATGCAGAGCGATTGTTTCGGAGAATAATATTAGGAGCTGGTTTTCAAAAATACGGcaatattttgttgataataaattaatagaacTTCTCCAAGACCCCAAACGTATCTTTAATTGTGATGAGAGCGGTTTTTATCTGTCGCCTCAAGAAAAGCAAGTACTAGTCAGAAAAGGCTCGAAAAAAGTGTACAATCGTACTGTCAACGACGAGAAAGAGTGTTTGACGGTTTTACTTACAGTAGCTGCTGATGGGGCAATACCTCCACCATTGATTATGTTTCCGTATAAACGCTATGTTCCGTCGTACATCACAGCCAATATGCCTAAAGGGTGGGGAATGGGTCACTCTGATTCTGGGTGGATGACTAGTGAGACATTTTATGAATACATCACAAATGTCTTTCACCCATGGTTAAAAGAAAAAGGAATCCAAATGCCAGTAGTTCTTTTTCTGGATGGTCATTCATCTCACATTGATATTAATCTGAGTGAATACTGTAAAGAACATGAGATAATTCTGGTAGCATTCTACCCCAATGCTACTCACCGTCTACAGCCATTGGATGTAGGGGTATTTTATCCTTTAAAAAATTGTTGGCGCAATGATGTCCGGGAATGGCGTATGGCAAACAGCGGGAAAAAAATGCAGCGATCAGATTTTTCGATAATATTGCATAAGTCTATAAATGCAACACTTTCGCCTGCGATAATTGCAAAAGCATTCCAAACGTGTGGGCTCTATCCGTTTAATGAGGATGCTATAGATTACTCGAAGCTAATAAAAGAAATTTCCAATGACGAAAATAACAATCTAGCACTATCTACTGCTAATCAACACGTCACACACAAAACAGATGGCAGTCAACCATTGAATTTACTAAGTGAAGTGGAAGCTCGTTTGCCTACGgaagttgtaaataaatttaaaaatgttgactCTGAAATTGATCTAGACGAGAGATTTCTTGAACTCTATAAATTCTGGAAAAATATAcaatctgaaaaaaatatatctatgaatGAAtctacttttcaaaataatctGCCTAGTAACTTAAATCAAACTATTTCTGacataattattaatgaagAGTTTTGGTTAGCTAATGACGCAATTGAAGCAACAGTCGAAACAGATGGGTCTTTAAGCTTAGTGAATTTAATATCTCAGCCATCTACATCAAAGCAAGACCAAGCAAAAGATTCAGATATAAATACAGATTTAAACCTTCATGATCCACAACAACCAGACTACAAAACACCAGTTAAAAAATCAGGAGACAATACCACAGGTTCAAAATATCCTACACCTTTTAAAAATGCTCTTTTTTGGCCAGGAAATATAGAAAAGAAGAGGAAGACTACCACAGATTGCAAGGGGcaattaaaaaaaccaaaaatgtaTCCCACCGTAGCAACTAGCGACCAGTTTATGGAATATCAACGACGAGTTGAGGCAGAGAAACTAGCTAAAGAGAATGATAAATTAGAGAGAGCtcaaaagaagaaagaaaaaagtcaGCAAACTAAGTCAAAAAAGAAGACAAAAGTTGAAATCAATACAGATATTACAGAAGCAAAAGAAAAAATGGAGTACCCAGAAGGGGTGTTTGTTGTTGTACAATATGAAGGAGAATATTTTCCCGGAATAGTGatggaaaatttaaatgataacaTAAAAGTAAAGACAATGACAATGAGTGGAAGTTACTGGAAATGGCCGGAGAAAGATGATATCTTGATCTATGATATTACAGACATCATGTGCAAAATCGAAAGTCCAGCTCTCATGTCTAGCCGTGGAACTTATGATGTTCCGAAAATAAATCAACTGCGAAATCAAAACGATCTGGTAaccttttaa
Protein Sequence
MNDKKRLKYSQENMEKALRDIREKKMSINQAAKSYDIPKTTILDRLKDKYKNSGNIGGPTVLTSSEEMYLVKWILELGEVGFLITKTQLLDSVTKLIKILGRQNPFKDDQPGKKWYNGFLARHPEVSKRVPQSLTTCRAIVSENNIRSWFSKIRQYFVDNKLIELLQDPKRIFNCDESGFYLSPQEKQVLVRKGSKKVYNRTVNDEKECLTVLLTVAADGAIPPPLIMFPYKRYVPSYITANMPKGWGMGHSDSGWMTSETFYEYITNVFHPWLKEKGIQMPVVLFLDGHSSHIDINLSEYCKEHEIILVAFYPNATHRLQPLDVGVFYPLKNCWRNDVREWRMANSGKKMQRSDFSIILHKSINATLSPAIIAKAFQTCGLYPFNEDAIDYSKLIKEISNDENNNLALSTANQHVTHKTDGSQPLNLLSEVEARLPTEVVNKFKNVDSEIDLDERFLELYKFWKNIQSEKNISMNESTFQNNLPSNLNQTISDIIINEEFWLANDAIEATVETDGSLSLVNLISQPSTSKQDQAKDSDINTDLNLHDPQQPDYKTPVKKSGDNTTGSKYPTPFKNALFWPGNIEKKRKTTTDCKGQLKKPKMYPTVATSDQFMEYQRRVEAEKLAKENDKLERAQKKKEKSQQTKSKKKTKVEINTDITEAKEKMEYPEGVFVVVQYEGEYFPGIVMENLNDNIKVKTMTMSGSYWKWPEKDDILIYDITDIMCKIESPALMSSRGTYDVPKINQLRNQNDLVTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00751950; iTF_00290590; iTF_01192548; iTF_01192549; iTF_00783352; iTF_01333659; iTF_00290591; iTF_01091627; iTF_01091628; iTF_01091629; iTF_01091630; iTF_01091631; iTF_01091632; iTF_00177037; iTF_01152955;
90% Identity
iTF_01333659;
80% Identity
iTF_00751950;