Pmet010103.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- -
- Assembly
- GCA_905147745.1
- Location
- LR990524.1:4894617-4896763[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-14 1.3e-11 44.8 0.0 2 41 11 50 10 52 0.93
Sequence Information
- Coding Sequence
- ATGAGTGATAAGAAAAGGTTAAAGTATTCGCAGGAAAATATGGAGAAAGCACTACGAGATATACGAGAGAAGAAAATGAGTATAAATCAGGCTGCAAAATCATACGACATTCCAAAAACAACGATATTAGACAGATTAAAAGACAAATATAAAAATCCAGGTAACATAGGCGGTCCAACTGTACTGACAAGCTCAGAAGAAATGTATCTGGTGAAATGGATTTTAGAATTGGGCGAAGTCGGTTTTCCGATAACGAAGACTCAGTTACTGGATTCTGTCACTAAATTAATTAAGAGTTTAGGCCGTCAAAATCCTTTTAAAGATGACCAGCCGGGTAAGAAATGGTATAATGGCTTTCTTGCTCGCCACCCGGAAGTTTCGAAAAGAGTTCCACAATCTCTCACAACATGCAGAGCGATTGTTTCGGAGAATAATATTAGGAGCTGGTTTTCAAAAATACGGCAATATTTTGTTGATAATAAATTAATAGAACTTCTCCAAGACCCCAAACGTATCTTCAATTGTGATGAGAGCGGTTTTTATCTGTCGCCTCAAGAAAAGCAAGTACTAGTCAGAAAAGGCTCGAAAAAAGTGTACAATCGTACTGTCAACGACGAGAAAGAGTGTTTGACGGTTTTACTTACAGTAGCTGCTGATGGGGCAATACGTCCACCATTGATTTTGTTTCCGTATAAACGCTATGTTCCGTCGTACATCACAGCCAATATGCCTAAAGGGTGGGGAATGGGTCACTCTGATTCTGGGTGGATGACTAGTGAGACATTTTATGAATACATCACAAATGTCTTTCACCCATGGTTAAAAGAAAAAGGAATCCAAATGCCAGTAGTTCTTTTTCTGGATGGTCATTCATCTCACATTAATATTAATCTGAGTGAATACTGTAAAGAACATGAGATAATTCTGATAGCATTCTACCCCAATGCTACTCACCGTCTACAGCCATTGGATGTAGGGGTATTTTATCCTTTAAAAAATTGTTGGCGCAATGATGTCCGGGAATGGCGTATGGCAAACAGCGGGAAAAAAATGCAGCGATCAGATTTTCCGATAATATTGCATAAGTCTATAAATGCAACACTTTCGCCTGCGATAATTGCAAAAGCATTCCAAACGTGTGGGCTCTATCCGTTTAATGAGGATGCTATAGATTACTCGAAGCTAATAAAAGAAATTTCCAATGACGAAAATAACAATCTAGCACTATCTACTGCTAATCAACACGTCACACACAAAACAGATGGCAGTCAACCATTGAATTTACTAAGTGAAGTGGAAGCTCGTTTGCCTACGGAAGTTGTAAATAAATTTAAAAATGTTGACTCTGAAATTGATCTAGACGAGAGATTTCTTGAACTCTATAAATTCTGGAAAAATATACAATCTGAAAAAAATATATCTATGAATGAATCTACTTTTCAAAATAATCTGCCTAGTAACTTAAATCAAACTATTTCTGACATAATTATTAATGAAGAGTTTTGGTTAGCTAATGATGACGCAATTGAAGCAACAGTCGAATCAGATGGGTCTTTAAGCTTAGTGAATTTAATATCTCAGCCATCTACATCAAAGCAAGACCAAGCAAAAGATTCAGATATAAATACAGATTTAAACCTTCATGATCCACAACAACCAGACTACAAAACACCAGTTAAAAAATCAGGAGACAATACCACAGGAAATATAGAAAAGAAGAGGAAGACTACCACAGATTGCAAGGGGCAATTAAAAAAACCAAAAATGTATCCCACCGTAGCAACTAGCGACCAGTTTATGGAATATCAACGACGAGTTGAGGCAGAGAAACTAGCTAAAGAGAATGATAAATTAGAGAGAGCTCAAAAGAAGAAAGAAAAAAGTCAGCAAACTAAGTCAAAACAGAAGACAAAAGTTGAAATCAATACAGATATTACAGAAGCAAAAGAAAAAATGGAGTACCCAGAAGGGGTGTTTGTTGTTGTACAATATGAAGGAGAATATTTTCCCGGAATAGTGATGGAAAATTTAAATAATAACATAAAAGTAAAGACAATGACAATGAGTGGAAGTTACTGGAAATAA
- Protein Sequence
- MSDKKRLKYSQENMEKALRDIREKKMSINQAAKSYDIPKTTILDRLKDKYKNPGNIGGPTVLTSSEEMYLVKWILELGEVGFPITKTQLLDSVTKLIKSLGRQNPFKDDQPGKKWYNGFLARHPEVSKRVPQSLTTCRAIVSENNIRSWFSKIRQYFVDNKLIELLQDPKRIFNCDESGFYLSPQEKQVLVRKGSKKVYNRTVNDEKECLTVLLTVAADGAIRPPLILFPYKRYVPSYITANMPKGWGMGHSDSGWMTSETFYEYITNVFHPWLKEKGIQMPVVLFLDGHSSHININLSEYCKEHEIILIAFYPNATHRLQPLDVGVFYPLKNCWRNDVREWRMANSGKKMQRSDFPIILHKSINATLSPAIIAKAFQTCGLYPFNEDAIDYSKLIKEISNDENNNLALSTANQHVTHKTDGSQPLNLLSEVEARLPTEVVNKFKNVDSEIDLDERFLELYKFWKNIQSEKNISMNESTFQNNLPSNLNQTISDIIINEEFWLANDDAIEATVESDGSLSLVNLISQPSTSKQDQAKDSDINTDLNLHDPQQPDYKTPVKKSGDNTTGNIEKKRKTTTDCKGQLKKPKMYPTVATSDQFMEYQRRVEAEKLAKENDKLERAQKKKEKSQQTKSKQKTKVEINTDITEAKEKMEYPEGVFVVVQYEGEYFPGIVMENLNNNIKVKTMTMSGSYWK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00751951;
- 90% Identity
- iTF_01333659;
- 80% Identity
- -