Gcon044974.1
Basic Information
- Insect
- Glossosoma conforme
- Gene Symbol
- bab1
- Assembly
- GCA_003347265.1
- Location
- PZYU01030790.1:19820-21991[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-18 1.8e-14 54.4 0.0 1 43 28 71 28 73 0.95 2 2 0.71 4e+03 -1.1 0.9 6 15 157 166 155 171 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACAAACCAGTCGCTCGTCCACAACTTGCGTTTCCGCGAGCGCGGCCCACTAAAGTCCTGGCGCCCGGAGACCATGGCCGAGGCCATCTTTTCCGTTCTAAAGGAGGGGCTATCTCTGTCCCAAGCCGCGAGGAAGTACGACATCCCATATCCGACATTCGTCCTGTACGCCAACCGCGTTCACAACATGCTCGGGCCCAGTGCCGATGGAGGGGCAGAGCTACGCCCCAAGGGGAGAGGCCGACCCCAGCGCATCTTGCTGGGAGTGTGGCCGGATGAGCACATCCGCGCGGTCATCCGCGCGGTTGTGTTCAGGGACTCGCACAGCGCCCACCACATCAAGGAAGAGCCACTGCCTACATACCCACCAATGACTGAGGCAATGTTGGTGCAGAATTATGGAAATGGATCCGAGGGTGGTTTGTCCCCCAGTTCTACCGGCGCCGCCGCTGCTGCAGTCGCAGCCGTCGCCCACGGCCTCCGCCGTCAAATGTGCAGCATGGTGGCTGCCGCTCAGCGTGCTCCAGCCCCCGACCTGTCTCCAGGTCTGGCGTCTCCTCCAGGAATGGCTCTAGAGCCTCCTCCACATCTCGCTCTCCCCGGAAATGGCTCTGATCACTTTCGTCCCTTTGCTTTGCCCCGCCCAGACAGCTGCTTTCGCGACGACCTCGAAGATCTGGTAAAGAGCCCCGAGATGTCTCCTCAGCGCCACCCAGAGCCGATGCCTGTTAAAATGGAGCCGCTCGGTGAACTGCCTCGCATGTAA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAELRPKGRGRPQRILLGVWPDEHIRAVIRAVVFRDSHSAHHIKEEPLPTYPPMTEAMLVQNYGNGSEGGLSPSSTGAAAAAVAAVAHGLRRQMCSMVAAAQRAPAPDLSPGLASPPGMALEPPPHLALPGNGSDHFRPFALPRPDSCFRDDLEDLVKSPEMSPQRHPEPMPVKMEPLGELPRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00023623; iTF_00799192; iTF_00800116;
- 90% Identity
- -
- 80% Identity
- -