Hjap012577.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- bab1
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000303.1:57038-64762[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-18 1.3e-14 54.0 0.0 1 43 67 110 67 112 0.95 2 2 1.6 3.2e+03 -1.6 0.9 6 15 199 208 198 211 0.87
Sequence Information
- Coding Sequence
- ATGTCCACCACTGCGGAGATCAACTTAAATGCCAAACTGCTGGAAAACTCTCACGCTTGGCTTGGGGCGTCCACATCGTCCATAGCCGTAGACAGTTACCAGTACCAACTTCAATCGATGTGGCAGAAATGCTGGAACACTAATCAATCGCTGGTTCATAATTTACGTTTTCGCGAGAGAGGCCCGCTCAAGTCTTGGAGACCAGAGACCATGGCCGAGGCCATTTTCTCTGTTCTCAAAGAAGGCCTGTCCCTCTCTCAGGCTGCCCGAAAGTACGACATTCCATACCCAACATTCGTGCTGTACGCCAATAGAGTTCACAACATGCTAGGACCCAGCGCTGATGGAGGTGCAGAGTTGAGACCCAAGGGAAGAGGACGGCCTCAACGCATCCTGCTCGGAGTGTGGCCTGATGAACATATCAGAGGTGTGATACGAGCAGTAGTCTTCAGGGACTCTCACAGCGCACACCACATCAAAGAAGAACCATTGCCCTCTTACCCAGCGATCACCGATTCAATGACAGCACAAAACTACAGCTCAGTTCCATGCGGCAACGGCTCAGATGGAGCCATGTCTCCAGGAGTTGCCGCCGCCGCAGCAGTGGCTGCTGTGGCCCACGGCCTACGACGTCAAATGTGCAGTATGGTGGCGGCAGCACATCGGCCACCACCTCCTTCTCCCCTATCTCCAGGCCTCTCATCTCCTCTATGTTCTCCTCCTCCTCCTGGAATGGCTTTAGAACCGCCCATGCATTTAGCTTTGTCCGGGAATGGATCTGATCACTTTCGTCCGTTTGCATCTCCAAGACCCGAAAGCTACTTTCGTGAAGATTTAGAAGACTTGGTCAAGAGTCCTGAGTCTTCACCCCCTCGCATCACCATCAAAGAGGCTGAGACCATGCCGGTGAAGTTGGAACCATATGGAGAGCCATCGCGTATGTAA
- Protein Sequence
- MSTTAEINLNAKLLENSHAWLGASTSSIAVDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAELRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHSAHHIKEEPLPSYPAITDSMTAQNYSSVPCGNGSDGAMSPGVAAAAAVAAVAHGLRRQMCSMVAAAHRPPPPSPLSPGLSSPLCSPPPPGMALEPPMHLALSGNGSDHFRPFASPRPESYFREDLEDLVKSPESSPPRITIKEAETMPVKLEPYGEPSRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00751132;
- 90% Identity
- iTF_00799192;
- 80% Identity
- -