Afus001261.1
Basic Information
- Insect
- Agapetus fuscipes
- Gene Symbol
- bab1
- Assembly
- GCA_951799405.1
- Location
- OX637332.1:21715861-21721081[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-17 1.3e-14 54.1 0.0 1 43 68 111 68 113 0.95 2 2 9.3 3.1e+03 -1.5 1.0 6 15 197 206 195 210 0.87
Sequence Information
- Coding Sequence
- ATGTATAACAcgtttgattttttgtttcaggCCAAACTACTGGAAAACTCTCACGCTTGGCTCGGAGCCTCAACTTCTGCCTCCATCGCCGCAGACAGCTACCAGTATCAGCTCCAATCCATGTGGCAAAAATGCTGGAACACCAACCAGTCCCTGGTGCACAACCTTCGCTTCCGGGAGCGTGGACCCTTGAAGTCCTGGCGCCCGGAAACCATGGCTGAAGCAATCTTCTCCGTGCTGAAGGAAGGACTTTCCCTTTCCCAGGCAGCTCGCAAATACGACATCCCTTACCCGACCTTCGTACTCTATGCCAATCGCGTCCATAATATGCTTGGACCCAGCGCTGATGGTGGAGCAGAACTCCGACCCAAGGGCAGAGGCCGTCCACAGCGCATCCTGCTGGGAGTTTGGCCTGACGAACATATACGCGGCGTCATACGCGCCGTGGTCTTCAGAGATTCTCACAGCTCCCACCACATCAAGGAAGAGCCGCTGCCCAGCTATCCTGGACTAAACGAGAACATGTGCGTGCCGAACTACGGCAACGGCTCCGACAGCGGCCTGTCGCCCAGCTCCGCAGGCGCGGCGGCCGCGGCCGTGGCCGCAGTCGCCCACGGGCTGCGCCGGCAGATGTGCAGCATGGTGGCGGCAGCCCAGCGCGCGCCCGCCCCCGCCCTGTCCCCGCCCCTGTGCTCGCCACCGCCTCCGGGCCTGGAGCCGCCGCCCCACTTGGCCCTGCCCGGCAACGGCGCCGACCACTTCCGCCCCTTCGCCTCGCCGCGCCCGGAGAGCTACTTCCGCGACGAGCTTGAGGACCTGGTGAAGAGCCCGTCCCCACCCAGGCAGTCGGACCCCATGCCGGTGAAGGTGGAGCCGCTGGGGGACCTGCCGCGCATGTAG
- Protein Sequence
- MYNTFDFLFQAKLLENSHAWLGASTSASIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAELRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHSSHHIKEEPLPSYPGLNENMCVPNYGNGSDSGLSPSSAGAAAAAVAAVAHGLRRQMCSMVAAAQRAPAPALSPPLCSPPPPGLEPPPHLALPGNGADHFRPFASPRPESYFRDELEDLVKSPSPPRQSDPMPVKVEPLGDLPRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00751132;
- 90% Identity
- -
- 80% Identity
- -