Basic Information

Insect: Glossina pallidipes
Gene Symbol: stc_1
Assembly: GCA_000688715.1
Location: Scaffold52:174720-179766[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.9e+04 -4.4 1.6 15 19 584 588 583 588 0.81

2 14 0.084 7.9e+02 0.3 0.4 4 10 617 623 616 623 0.95

3 14 1.7e-06 0.016 15.3 15.3 3 19 630 646 629 646 0.92

4 14 3.2e-07 0.003 17.6 15.2 3 19 684 700 682 700 0.92

5 14 1.5 1.4e+04 -3.7 0.6 7 11 704 708 704 708 0.87

6 14 1.5e-07 0.0014 18.6 18.6 1 19 740 758 740 758 0.98

7 14 0.00019 1.8 8.7 17.7 4 18 806 820 799 821 0.86

8 14 0.035 3.4e+02 1.5 11.5 1 11 861 871 861 882 0.94

9 14 5.7e-10 5.4e-06 26.4 15.5 1 18 888 905 888 906 0.97

10 14 2 1.9e+04 -4.1 0.9 6 10 935 939 935 940 0.81

11 14 2 1.9e+04 -7.3 10.3 9 18 952 962 942 963 0.78

12 14 4e-07 0.0038 17.3 12.7 1 16 999 1014 999 1025 0.88

13 14 1e-06 0.0094 16.0 13.7 1 18 1031 1049 1031 1050 0.90

14 14 0.92 8.7e+03 -3.0 1.5 8 12 1066 1070 1059 1070 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.9e+04	-4.4	1.6	15	19	584	588	583	588	0.81
2	14	0.084	7.9e+02	0.3	0.4	4	10	617	623	616	623	0.95
3	14	1.7e-06	0.016	15.3	15.3	3	19	630	646	629	646	0.92
4	14	3.2e-07	0.003	17.6	15.2	3	19	684	700	682	700	0.92
5	14	1.5	1.4e+04	-3.7	0.6	7	11	704	708	704	708	0.87
6	14	1.5e-07	0.0014	18.6	18.6	1	19	740	758	740	758	0.98
7	14	0.00019	1.8	8.7	17.7	4	18	806	820	799	821	0.86
8	14	0.035	3.4e+02	1.5	11.5	1	11	861	871	861	882	0.94
9	14	5.7e-10	5.4e-06	26.4	15.5	1	18	888	905	888	906	0.97
10	14	2	1.9e+04	-4.1	0.9	6	10	935	939	935	940	0.81
11	14	2	1.9e+04	-7.3	10.3	9	18	952	962	942	963	0.78
12	14	4e-07	0.0038	17.3	12.7	1	16	999	1014	999	1025	0.88
13	14	1e-06	0.0094	16.0	13.7	1	18	1031	1049	1031	1050	0.90
14	14	0.92	8.7e+03	-3.0	1.5	8	12	1066	1070	1059	1070	0.69

Sequence Information

Coding Sequence: ATGTCGGCCGCTGACTCTactcagcaaactcagcaaacAATACATCAGCCGTCGCTGTCACAATTGTGGCCAGAATTTGGGGCATCTTCCGTTAATGACGTGACAGCAGGTGAGGTTTTTAACAGGAGAGATGGCGTTGAAGATAAAGGCGATAATAGCCCTGGTGCATTGGGGCTTTCCTCTTTCGGCAAGAGCAATAGCAAAAGCAACAATTACGTAAATTTCAATCAATTCATCATGCAACATAATTTATTGGGAACTAATGGTGGCGGTAAGGATGAAATGGTAAACAACGAAACGGCTTACACAAACTTAACCAATGTTTTTAATACTGGCGACGATTTACTGGGGGTTAACAAGCTCTCGTACAATAACAACACCAACACTATTGGTGCAGATTCGTTTTACCAACGAAATTATTATTCTCCTGGAAATCCATTGGGTTTCTCATATAATCAAAATGCTGCAAATAGCATTTTTAGTGATGATCTATCTTCTAATAATATGTATATGGGGacagcagcacaaaatttatacaatagaggcaataacaacaacagcaacaacaacaacaactgcaacattaacaatagcaacagttacgaacaatTATATACGCCTTTTAATAGCAATACCACGTACTATGCAAACCCATTCGCGACAGGATTCGATTTTACAGCAACAAAATTACAAGTAAACGCACCTGAATTTGTGCCACGTTTCGATAAACTTTCGTTGAACGAAAATCAAACTATATGGAATAACAAAGATAATGAATTATTTGATGAACAGAAAACTGAATTGGTGGCTGCTTTCAACAATTCTCACTGCAGCTCACAAATCGATGAAAAGCCTGCAAAGAGGGAGGAGCAGGAATTAACTGTAAAAGGGCAAGAGGATTTCGTTAAAAGTGCGCAAAAATATGATACATCTAGAGATAAAATAGAAAAGCAAGCAGATGACGATGGTGGAAGTAATAATTACAATCCCCACATTCaaaaaaaaCCATATAATCGTATTGaaaaaaaTATGGAAAGATTTTCACGTAATTTTTTGGATAACAAACGCAATGATTGCTCGCCTAATTCCAATTCATCAGCATCATCAACAGGAATGGTACAAAAGGCAAGCGGTACTCTCAATAAGCTAACGAACGACGCTAACGAAGATAAAATTAACCAAACAGAAATTGTTCAAGAGAAAGCAAGACGTTTCCAGAATAGTCGTAGTCGTGGTAGTATTGGTGGTGGAAGTACTATGCAGGACTATCAGGACCGTGAAGATCGTTTTGAACGTTATGTAGAGAGGGGGGAACGTTCCGAAAGAGGCTATAATAGTTACGGACATCACCGTGTGAACCGTGATCGTGACTATCATCAACGTTACGATAGCTATCGTAGCAGCAAAAGACGCGATGATTGGAATCGGAATCGTGATCGCGTTAATGGTTTTCGAGTGGAGGAAAAGTACTCAACTGACAACATCAAAGATAGTCCAATGCATTCGCCTGAAAAGAAATTGCTTCATATTAGTAATTCGCCGAAGAAATTCTATCCAGAAAACGAGAAGTTGTCGCAACGTGAAAAATTGATACGGGACATTGAAACAAGACGTTTAGAGTGTTTGGTGTGTGTTGAACCGATCAAGAGTCATCAGGGTGTTTGGTCCTGTCACAATTGCTATCATATTTTGCACTTACAGTGCATTGTCAAATGGGCCTCATCTTCCAAGTCAGATGATGGCTGGCGTTGTCCGGCCTGTCAGAATGTTGTGAAAGAAGTGCCGCGGGATTACTATTGTTTTTGCGGCAAGGTAAAGAATCCATTGCAAAATAGACAAGATTTGGCTCATTCATGCGGCGAAGTCTGTAGTCGGGTTGAAAATTGCACACATGCGTGTACTTTATTATGTCATCCTGGACCTTGCCCCCCTTGTCAAGCCAATGTTAAGCGGGAATGTGGATGCGGTAAAACAACTAAAATTATGCAATGTTGTGTAAAAGACACCGTAGAATGCGATGCCATCTGTGACAAGTTATTGAATTGTGAAGTGCACCGGTGTCAAGAAACATGTCATCAAGGCAAATGTCCACCTTGCAAGGAAAAGGTAGAACAGAAATGCCACTGTTCTAAGCAGGAACGTCAGGTGGCTTGTACTCGTGAATCCCATGATAAACACGTCTACTCATGTGGAAAACCTTGCGGCAAGGACTTGGCTTGCGGTAATCATAAATGTAAAGATTGCTGCCATGCTGGTGAATGTCGTCCTTGTAAACTTTCACCTGAAATAGTGACTTCTTGTCCTTGTGGCAAAATGCCTATAGTTCCTCAACAGCGGACTTCTTGCTTGGACCCCATTCCACTATGTGAAGGTATTTGTGGTAAAACTTTGCGCTGCGGCAAACCGGCTCATCCCCATCACTGCACCAGTAAATGCCATTTGGGCAATTGTCCACCTTGTAATAAGCAGACTGCAGTTAAATGCCGTTGCGGCCATATGGATCAAATGATAAAATGTCGTCACTTAAGCACAAGGGCTGATGACGCACGGTGTAAGAAACGGTGTGTTAAAAAACGGTCTTGCGGTAAACATAAATGCAATCAGGAATGCTGCATAGACATTGATCATATTTGTCCACTGCCTTGCAATTATACATTGTCGTGCGGCAAGCATAAGTGTGATCAACCCTGTCATCGTGGTAATTGTCCGCCATGTTACCGATCTTCATTTGAGGAATTATTTTGTGAGTGCGGAGCAGAGGTAATCTACCCACCTGTGCCTTGCGGCACTAAGCGACCGCTTTGCAAAAGGCCATGTTCACGTAAGCATCCTTGCGACCATTCTCCACAGCACAATTGTCACTCTGCTGCAAGTTGTCCTCCATGCATGATGTTTACCACTAAATGGTGTTTCGGGCAACATGAGCAGCGCAAAACCATTCCATGCTCACAACAGAGTTTTAGCTGCGGCATGGCTTGCAATAAACCGTTGCCGTGTGGACGACATAAATGTATAAAAACCTGTCACGAAGGTATTTGCCAGGTGGCAGGAGAGATTTGCAAACAAAGTTGTCCAATACTGAGAGCATCATGTGGTCATAAGTGCATGGCTCCATGCCATGAGGGCGACTGTCCTGAAACCCAGTGCAAGGAAATGGTCGAGGTTCAGTGTGAGTGCGGTCATCGTAAACAGATGCGTCCTTGTCATGAGTTAGCACGTGAGTACAGTCGTATTGCTACTGCTCAATTGGCTTCGTCTATGGCTGAAATGCAACGCGGTAATTACATGGAGTTGAGTGAGATTTTAGCTCCAGTCAAGTTCTCTAATAAAACCAACAAAACTCTTGATTGTAATGATGAATGCCGCTTAATGGAACGTAATCGTCGTTTGGCTGTGGGTTTGCAGACACGTAATCCCGATTTACCACAAAAATTAATGACAAAATATTCTGAATTTATACGTAATTTTGCTAAGCGTGACCCGGCTTTGGTGAAATCTGTTCATGAAGCCTTAACCACGTTAGTTAAATTGGCCAAAGAGAGTAAACAGAAATCACGTTCGCATTCATTTCCCACCATGAATCGTGAAAAGAGACAACTCGTTCATGAAATGTGTGAGATGTTTGGTGTCGAATCTGTGGCTTATGATGCTGAACCAAATCGTAATGTGGTAGCTACGGCCTATAGAGATAGGTGTTGGCTTCCAGCTACCAGCATTATGGATGTTATACAACGTGAATCTGGTCAACGTCGTGTGCCGGTACCCAGTAACAATGCTTGGGGCTCGAAGAGATAA
Protein Sequence: MSAADSTQQTQQTIHQPSLSQLWPEFGASSVNDVTAGEVFNRRDGVEDKGDNSPGALGLSSFGKSNSKSNNYVNFNQFIMQHNLLGTNGGGKDEMVNNETAYTNLTNVFNTGDDLLGVNKLSYNNNTNTIGADSFYQRNYYSPGNPLGFSYNQNAANSIFSDDLSSNNMYMGTAAQNLYNRGNNNNSNNNNNCNINNSNSYEQLYTPFNSNTTYYANPFATGFDFTATKLQVNAPEFVPRFDKLSLNENQTIWNNKDNELFDEQKTELVAAFNNSHCSSQIDEKPAKREEQELTVKGQEDFVKSAQKYDTSRDKIEKQADDDGGSNNYNPHIQKKPYNRIEKNMERFSRNFLDNKRNDCSPNSNSSASSTGMVQKASGTLNKLTNDANEDKINQTEIVQEKARRFQNSRSRGSIGGGSTMQDYQDREDRFERYVERGERSERGYNSYGHHRVNRDRDYHQRYDSYRSSKRRDDWNRNRDRVNGFRVEEKYSTDNIKDSPMHSPEKKLLHISNSPKKFYPENEKLSQREKLIRDIETRRLECLVCVEPIKSHQGVWSCHNCYHILHLQCIVKWASSSKSDDGWRCPACQNVVKEVPRDYYCFCGKVKNPLQNRQDLAHSCGEVCSRVENCTHACTLLCHPGPCPPCQANVKRECGCGKTTKIMQCCVKDTVECDAICDKLLNCEVHRCQETCHQGKCPPCKEKVEQKCHCSKQERQVACTRESHDKHVYSCGKPCGKDLACGNHKCKDCCHAGECRPCKLSPEIVTSCPCGKMPIVPQQRTSCLDPIPLCEGICGKTLRCGKPAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRHLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPLCKRPCSRKHPCDHSPQHNCHSAASCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGMACNKPLPCGRHKCIKTCHEGICQVAGEICKQSCPILRASCGHKCMAPCHEGDCPETQCKEMVEVQCECGHRKQMRPCHELAREYSRIATAQLASSMAEMQRGNYMELSEILAPVKFSNKTNKTLDCNDECRLMERNRRLAVGLQTRNPDLPQKLMTKYSEFIRNFAKRDPALVKSVHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYRDRCWLPATSIMDVIQRESGQRRVPVPSNNAWGSKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00748665;
90% Identity: iTF_00747158; iTF_00748665; iTF_00750907; iTF_00749373;
80% Identity: -