Basic Information

Insect: Glossina palpalis
Gene Symbol: stc
Assembly: GCA_000818775.1
Location: Scaffold210:162033-168104[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2e+04 -4.3 1.6 15 19 577 581 576 581 0.81

2 14 0.083 8.2e+02 0.3 0.4 4 10 610 616 609 616 0.95

3 14 1.6e-06 0.016 15.3 15.3 3 19 623 639 622 639 0.92

4 14 1.6e-07 0.0016 18.6 14.0 3 19 677 693 675 693 0.92

5 14 1.5 1.5e+04 -3.7 0.6 7 11 697 701 697 701 0.87

6 14 1.5e-07 0.0015 18.7 18.6 1 19 733 751 733 751 0.98

7 14 0.00019 1.9 8.7 17.7 4 18 799 813 792 814 0.86

8 14 0.035 3.5e+02 1.5 11.5 1 11 854 864 854 875 0.94

9 14 5.7e-10 5.6e-06 26.4 15.5 1 18 881 898 881 899 0.97

10 14 2 2e+04 -4.1 0.9 6 10 928 932 928 933 0.81

11 14 2 2e+04 -7.3 10.3 9 18 945 955 935 956 0.78

12 14 4e-07 0.0039 17.3 12.7 1 16 992 1007 992 1018 0.88

13 14 9.9e-07 0.0098 16.0 13.7 1 18 1024 1042 1024 1043 0.90

14 14 0.91 9e+03 -3.0 1.5 8 12 1059 1063 1052 1063 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2e+04	-4.3	1.6	15	19	577	581	576	581	0.81
2	14	0.083	8.2e+02	0.3	0.4	4	10	610	616	609	616	0.95
3	14	1.6e-06	0.016	15.3	15.3	3	19	623	639	622	639	0.92
4	14	1.6e-07	0.0016	18.6	14.0	3	19	677	693	675	693	0.92
5	14	1.5	1.5e+04	-3.7	0.6	7	11	697	701	697	701	0.87
6	14	1.5e-07	0.0015	18.7	18.6	1	19	733	751	733	751	0.98
7	14	0.00019	1.9	8.7	17.7	4	18	799	813	792	814	0.86
8	14	0.035	3.5e+02	1.5	11.5	1	11	854	864	854	875	0.94
9	14	5.7e-10	5.6e-06	26.4	15.5	1	18	881	898	881	899	0.97
10	14	2	2e+04	-4.1	0.9	6	10	928	932	928	933	0.81
11	14	2	2e+04	-7.3	10.3	9	18	945	955	935	956	0.78
12	14	4e-07	0.0039	17.3	12.7	1	16	992	1007	992	1018	0.88
13	14	9.9e-07	0.0098	16.0	13.7	1	18	1024	1042	1024	1043	0.90
14	14	0.91	9e+03	-3.0	1.5	8	12	1059	1063	1052	1063	0.69

Sequence Information

Coding Sequence: ATGTCGGCCGCTGACTCTAAAACTCAGCAAACAATACATCAGCCGTCGCTGTCACAATTGTGGCCAGAATTTGGGGCATCTTCCGATAATGACGTGACAGCAGGTGAGGTTTTTAACAGGAGAGATGGCGTTGAAGATAAAGGCGATAATAGCCCTGGTGCATTGGGACTTTCCTCTTTCGGCAAGAGCAATAGCAAAAGTAACAATTACGTAAATTTTAATCAATTCATCATGCAACATAATTTATTGGGAACTAATGGTGGCGGTAAGGATGAAATGGTAAACAACGAAACGGCTTACACAAACTTAACCAATGTTTTCAATACTGGGGATGATTTACTGGGGGTTAACAAGCTCTCGTACAATAACAACACCAACACTATTGGAGCAGATTCGTTTTACCAACGAAATTATTATTCTCCTGGAAATCCCTTGGGTTTCTCATATAATCAAAATGCGGCAAATAGCATTTTTAGTGATGGTCTATCTTCTAATAATATATATACGGGGGGAGCAGCACAAAATTTATACAATAGAGGCAATaacaacaacaacaacaacaGCATAAACAATACCAACAGTTACGAACAATTATATACGCCTTTCAATAGCAATACCACGTACTATGCAAATCCATTCGCGACAGGATTCGATTTTACAGCAACAAAATTACAAGTAAATGCACCTGAATTTGTGCCACGTTTCGATAAACTTTCGTTGAACGAAAATCAAACTATATGGAATAACAAAGATAATGAATTATTTGATGAACAGAAAACTGATCTGGTGGCTGCTTTCAGTAATTCTCAATGCGGCTCACAAACCGAAGAAAACCTGGCAAAGAAGGAAGAGCAGAAATTAACCGTAAAAGGACAAGAGGACTTCGTTAAAAGTGCGCAAAAATATGATACATCTCAAGATAAAATAGAAAAACAAACAGATGACGATGGAGGAAGTAGTAATTACAATCCCCACATTCaaaaaaaaTCTTACAATCGTATCGaaaaaaaTATGGAAAGATTTTCACGTAATTTTTTGGATAACCAACGGAATGACTGCTCGCCTAATTCCAATTCATCATCATCATCAACAGGAATGGTACAAAAGGCAAGCGGTACTCTCAATAAGTTAACGAACGACGCTAACGAAGATAAAATTCACCAAACAGAAATTGTTCAAGAGAAAGCAAGGCGTTTCCAGAACAGTCGTAGTCGTGGTAGTATTGGTGGTGGAGGTAATATGCAGGACTATCAGGATCGTGAAGATCGTTTTGAACGCTATGTAGAGAGGGGAGAACGTTCCGAAAGAGGCTATAATAGTCACGGACATCACCGTGTGAATCGTGATCGTGACTATCATCAACGTTACGATAGCTATCGTAGCAGCAAAAGACGTGATGATTGGAATCGGAACCGTGATCGCGTTAATGGTTTTCGAGTGGAGGAGAAGTACTCAACTGACAACATCAAAGATAGTCCAGTGCAATCACCTGAAAAGAAATTGCATATTAGTAATTCACCGAAGAAATTCTATCCAGAAAATGAGAAGTTATCGCAACGTGAAAAATTGATACGAGACATTGAAACGAGACGTTTAGAGTGTTTGGTGTGTGTTGAACCGATCAAGGGTCATCAGGGTGTTTGGTCCTGTCACAATTGCTATCATATTTTGCACTTACAGTGCATTGTCAAATGGGCCTCATCTTCCAAGTCAGATGATGGATGGCGTTGTCCAGCTTGTCAGAATGTTGTGAAAGAAGTGCCGCGCGATTACTATTGCTTTTGCGGCAAGGTAAAGAATCCATTGCAGAACAGGCAAGATTTGGCTCATTCATGCGGCGAAGTCTGCAGTCGAGTTGAAAATTGCACGCATGCCTGTACTTTATTGTGTCATCCTGGACCTTGCCCTCCTTGTCAAGCCAATGTTAAGCGAGAATGTGGATGCGGGAAAACAACTAAAATTATGCAATGTTGTGTAAAAGATACCGTAGAATGTGATGCCATCTGTGACAAGTTATTGAATTGCGAAGTGCACCGATGTCAAGAAATATGTCATCAGGGCAAATGTCCACCGTGCAAGGAAAAGGTAGAACAGAAATGCCACTGTTCTAAGCAGGAACGTCAGGTGGCTTGTACTCGTGAATCCCACGATAAACACGTCTACTCATGTGGAAAACCCTGTGGCAAGGACTTGGCTTGCGGTAATCACAAGTGCAAAGATTGCTGCCATGCTGGTGAATGTCGCCCATGTAAACTTTCACCTGAAATAGTGACTTCTTGTCCTTGTGGCAAAATGCCTATAGTTCCTCAACAGCGGACTTCTTGCTTGGACCCCATTCCACTATGTGAAGGTATTTGTGGTAAAACTTTGCGCTGCGGCAAACCGGCTCATCCCCATCACTGCACCAGCAAATGCCATTTGGGCAATTGTCCACCTTGTAATAAGCAGACTGCAGTTAAATGCCGTTGCGGCCATATGGATCAAATGATAAAATGTCGTCACTTAAGCACAAGGGCTGATGACGCACGGTGTAAGAAGCGTTGTGTTAAAAAACGATCTTGCGGTAAACATAAATGCAATCAGGAATGCTGCATTGACATTGATCATATTTGTCCACTGCCTTGCAATTATACATTGTCGTGCGGCAAGCATAAGTGTGATCAACCCTGTCATCGCGGTAATTGCCCACCATGTTACCGATCTTCATTTGAGGAATTATTTTGTGAATGCGGAGCAGAGGTTATCTACCCACCTGTGCCTTGCGGCACTAAGCGACCGCTTTGCAAAAGGCCGTGTTCACGTAAGCATCCTTGCGACCATTCTCCACAGCACAATTGCCACTCTGCTGCAAGTTGTCCTCCATGCATGATGTTTACCACTAAATGGTGTTTCGGGCAGCATGAGCAGCGCAAAACCATTCCATGCTCACAACAGAGTTTTAGCTGCGGCATGGCTTGCAATAAACCGTTGCCGTGTGGTCGACATAAATGTATAAAAACTTGTCACGAAGGTATTTGCCAGGTGGCAGGAGAGATTTGCAAGCAAAGTTGTCCCATACTGAGAGCATCATGCGGTCATAAGTGCATGGCCCCTTGCCATGAAGGCGACTGTCCTGAAACCCAGTGCAAGGAAATGGTCGAGGTTCAGTGCGAGTGCGGTCATCGTAAACAGATGCGTCCTTGTCATGAGTTAGCACGTGAGTACAGTCGCATTGCTACTGCTCAATTGGCTTCGTCTATGGCTGAAATGCAACGCGGTAATTACATGGAGTTGAGTGAGATTTTAGCTCCAGTCAAATTTTCTAATAAAACCAATAAAACTCTTGATTGTAATGATGAATGCCGCTTGATGGAACGTAATCGCCGTTTAGCTGTCGGTTTGCAGACACGTAATCCCGATTTACCGCAAAAATTAATGACAAAATATTCTGAATTTATACGTAATTTTGCTAAGCGTGACCCGGCTTTGGTGAAATCTGTTCATGAAGCCTTAACCACATTAGTTAAATTGGCCAAAGAGAGTAAACAGAAATCACGTTCGCATTCATTTCCCACCATGAATCGTGAAAAGAGACAACTCGTTCATGAAATGTGTGAGATGTTTGGCGTCGAATCTGTGGCTTATGATGCTGAACCAAATCGTAATGTCGTAGCTACGGCCTATAGAGACAGGTGTTGGCTTCCAGTTACCAGCATTATGGATGTTATACAACGTGAATCTGGTCAACGTCGTGTGCCGGTGCCCAGTAATAATGCTTGGGGCTCGAAAAGATAA
Protein Sequence: MSAADSKTQQTIHQPSLSQLWPEFGASSDNDVTAGEVFNRRDGVEDKGDNSPGALGLSSFGKSNSKSNNYVNFNQFIMQHNLLGTNGGGKDEMVNNETAYTNLTNVFNTGDDLLGVNKLSYNNNTNTIGADSFYQRNYYSPGNPLGFSYNQNAANSIFSDGLSSNNIYTGGAAQNLYNRGNNNNNNNSINNTNSYEQLYTPFNSNTTYYANPFATGFDFTATKLQVNAPEFVPRFDKLSLNENQTIWNNKDNELFDEQKTDLVAAFSNSQCGSQTEENLAKKEEQKLTVKGQEDFVKSAQKYDTSQDKIEKQTDDDGGSSNYNPHIQKKSYNRIEKNMERFSRNFLDNQRNDCSPNSNSSSSSTGMVQKASGTLNKLTNDANEDKIHQTEIVQEKARRFQNSRSRGSIGGGGNMQDYQDREDRFERYVERGERSERGYNSHGHHRVNRDRDYHQRYDSYRSSKRRDDWNRNRDRVNGFRVEEKYSTDNIKDSPVQSPEKKLHISNSPKKFYPENEKLSQREKLIRDIETRRLECLVCVEPIKGHQGVWSCHNCYHILHLQCIVKWASSSKSDDGWRCPACQNVVKEVPRDYYCFCGKVKNPLQNRQDLAHSCGEVCSRVENCTHACTLLCHPGPCPPCQANVKRECGCGKTTKIMQCCVKDTVECDAICDKLLNCEVHRCQEICHQGKCPPCKEKVEQKCHCSKQERQVACTRESHDKHVYSCGKPCGKDLACGNHKCKDCCHAGECRPCKLSPEIVTSCPCGKMPIVPQQRTSCLDPIPLCEGICGKTLRCGKPAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRHLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPLCKRPCSRKHPCDHSPQHNCHSAASCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGMACNKPLPCGRHKCIKTCHEGICQVAGEICKQSCPILRASCGHKCMAPCHEGDCPETQCKEMVEVQCECGHRKQMRPCHELAREYSRIATAQLASSMAEMQRGNYMELSEILAPVKFSNKTNKTLDCNDECRLMERNRRLAVGLQTRNPDLPQKLMTKYSEFIRNFAKRDPALVKSVHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYRDRCWLPVTSIMDVIQRESGQRRVPVPSNNAWGSKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00748665;
90% Identity: iTF_00750139;
80% Identity: -