Basic Information

Insect: Glossina austeni
Gene Symbol: stc
Assembly: GCA_000688735.1
Location: Scaffold26:418289-423272[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.9e+04 -4.4 1.6 15 19 583 587 582 587 0.81

2 14 0.083 8.1e+02 0.3 0.4 4 10 616 622 615 622 0.95

3 14 1.7e-06 0.016 15.3 15.3 3 19 629 645 628 645 0.92

4 14 3.2e-07 0.0031 17.6 15.2 3 19 683 699 681 699 0.92

5 14 1.5 1.5e+04 -3.7 0.6 7 11 703 707 703 707 0.87

6 14 1.5e-07 0.0015 18.6 18.6 1 19 739 757 739 757 0.98

7 14 0.00019 1.9 8.7 17.7 4 18 805 819 798 820 0.86

8 14 0.035 3.4e+02 1.5 11.5 1 11 860 870 860 881 0.94

9 14 5.7e-10 5.6e-06 26.4 15.5 1 18 887 904 887 905 0.97

10 14 2 1.9e+04 -4.1 0.9 6 10 934 938 934 939 0.81

11 14 2 1.9e+04 -8.0 11.0 10 18 952 961 941 962 0.78

12 14 4e-07 0.0039 17.3 12.7 1 16 998 1013 998 1024 0.88

13 14 1e-06 0.0097 16.0 13.7 1 18 1030 1048 1030 1049 0.90

14 14 0.92 8.9e+03 -3.0 1.5 8 12 1065 1069 1058 1069 0.69

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.9e+04	-4.4	1.6	15	19	583	587	582	587	0.81
2	14	0.083	8.1e+02	0.3	0.4	4	10	616	622	615	622	0.95
3	14	1.7e-06	0.016	15.3	15.3	3	19	629	645	628	645	0.92
4	14	3.2e-07	0.0031	17.6	15.2	3	19	683	699	681	699	0.92
5	14	1.5	1.5e+04	-3.7	0.6	7	11	703	707	703	707	0.87
6	14	1.5e-07	0.0015	18.6	18.6	1	19	739	757	739	757	0.98
7	14	0.00019	1.9	8.7	17.7	4	18	805	819	798	820	0.86
8	14	0.035	3.4e+02	1.5	11.5	1	11	860	870	860	881	0.94
9	14	5.7e-10	5.6e-06	26.4	15.5	1	18	887	904	887	905	0.97
10	14	2	1.9e+04	-4.1	0.9	6	10	934	938	934	939	0.81
11	14	2	1.9e+04	-8.0	11.0	10	18	952	961	941	962	0.78
12	14	4e-07	0.0039	17.3	12.7	1	16	998	1013	998	1024	0.88
13	14	1e-06	0.0097	16.0	13.7	1	18	1030	1048	1030	1049	0.90
14	14	0.92	8.9e+03	-3.0	1.5	8	12	1065	1069	1058	1069	0.69

Sequence Information

Coding Sequence: ATGTCGGCCGCTGACTCTAAAACTCAGCAAACAATACATCAGCCGTCACTGTCACAATTGTGGCCAGAATTTGGGGCATCTTCCGTTAATGACGTGACAGCAGGTGAGGTTTTTAACAGGAGAGATGGCGTTGAAGATAAAGGCGATAATAACCCTGGTGCATTGGGGCTTTCCTCTTTCGGCAAGAGTAATAGCAAAAGCAACAATTACGTAAATTTCAATCAATTCATCATGCAACATAATTTATTGGGAACTAATGGTGGCGGAAAGGATGAAATGGTAAACAACGAAACGGCTTACACAAACTTAACCAATGTTTTTAATACTGGCGATGATTTGCTGGGGGTTAACAAGCTCTCGTACAATAACAACACCAACACTATTGGAGCAGATTCGTTTTACCAACGAAATTATTATTCTCCTGGAAATCCATTGGGTTTCTCATATAATCAAAATGCTGCAAATAGCATTTTTAGTGATGATCTATCTTCTAATAATATGTATATGGGGGCAGCAGCACAAAATTTATACAATAGAGGcaataacaacaacagtaacaacaacaactgcaacattaacaatagtaacagttacgaacaaTTATATACGCCTTTCAATAGCAATACCACGTACTATGCAAACCCATTCGCGACAGGATTCGATTTTACAGCAACAAAATTACAAGTAAACGCACCTGAATTTGTGCCACGTTTCGATAAACTTTCGTTGAACGAAAATCAAACTATATGGAATAACAAAGATAATGAATTATTTGATGAACAGAAAACTGAATTGGTCGCTGCTTTCAACAATTCTCACTGCAGCTCACACACACAAATCGATGAAAAATCTGCAAAGGGGGAGGAGCAGGAAATAACTGTAAAAGGACAAGAGGATTTCGTTAAAAGTGCGCAAAAATATGATACATCTAGAGATAAAATAGAAAAACAAGCAGATGACGATGGTGGAAGTAATAATTACAATCCCCACATTCaaaaaaaaTCATACAATCGTATTGaaaaaaaTACGGAAAGATTTTCACGTAATTTTTTGGATAACAAACGGAATGATTGCTCGCCTAATTCCAATTCATCAGCATCATCAACAGGAATGGTACAAAAGGCAAGCGGTACTCTCAATAAGCTAACGAACGACGCTAACGAAGATAAAATTAACCAAACAGAAATTGTTCAAGAGAAAGCAAGGCGTTTCCAGAATAGTCGTAGTCGTGGTAGTATTGGTGGTGGAAGTAGTATGCAGGACTATCAGGACCGTGAAGATCGTTTTGAACGTTACGTAGAGAGGGGGGAACGTTCCGAAAGAGGCTATAATAGTCACGGACATCACCGTGTGAACCGTGATCGTGACTATCATCAACGTTACGATAGCTATCGTAGCAGCAAAAGACGCGATGATTGGAATCGGAACCGTGATCGCGTTAATGGTTTTCGAGTGGAGGAAAAGTACTCAACTGACAACATCAAAGATAGTCCATTGCATTCGCCTGAAAAGAAATTGCTTCATATTAGTAACTCGCCGAAGAAATTCTATCCAGAAAACGAGAAACTGTCGCAACGTGAAAAATTGATACGAGACATTGAAACGAGACGTTTAGAGTGTTTGGTGTGTGTTGAACCGATCAAGGGTCATCAGGGTGTTTGGTCCTGTCACAATTGCTATCATATTTTGCACTTACAGTGCATTGTCAAATGGGCCTCATCCTCCAAGTCAGATGATGGTTGGCGTTGTCCGGCCTGTCAGAATGTTGTGAAAGAAGTGCCGCGCGATTACTATTGTTTTTGCGGCAAGGTAAAGAATCCACTGCAGAATAGACAAGATTTGGCTCATTCATGCGGCGAAGTCTGCAGTCGGGTTGAAAATTGCACACATGCCTGTACTTTATTATGTCATCCTGGACCTTGCCCCCCTTGTCAAGCCAATGTTAAGCGGGAATGTGGATGCGGTAAAACAACTAAAATTATGCAATGTTGTGTAAAAGATACCGTAGAATGTGATGCCATATGTGACAAGTTATTGAATTGCGAAGTGCACCGGTGTCAAGAAACATGTCATCAAGGCAAATGTCCACCTTGCAAGGAAAAGGTAGAACAGAAATGCCACTGTTCTAAGCAGGAACGTCAGGTGGCTTGTACTCGTGAATCCCATGATAAACACGTCTACTCATGTGGAAAACCCTGTGGCAAGGACTTGGCTTGCGGTAATCATAAATGTAAAGATTGCTGCCATGCTGGTGAATGTCGTCCTTGTAAACTTTCGCCTGAAATAGTGACTTCTTGTCCTTGTGGCAAAATGCCTATAGTTCCTCAACAGCGGACTTCTTGCTTGGACCCCATTCCACTATGTGAAGGTATTTGTGGTAAAACTTTGCGCTGCGGCAAACCGGCTCATCCCCATCACTGTACCAGCAAATGCCATTTGGGCAATTGTCCACCTTGTAATAAGCAGACTGCAGTTAAATGCCGTTGCGGCCATATGGATCAAATGATAAAATGTCGTCACTTAAGCACAAGGGCTGATGACGCGCGATGTAAGAAACGGTGTGTTAAAAAACGGTCTTGCGGTAAACATAAATGCAATCAGGAATGCTGCATAGACATTGATCATATTTGTCCACTGCCTTGCAATTATACATTGTCGTGCGGCAAGCATAAGTGTGATCAACCCTGTCATCGCGGTAATTGTCCGCCATGTTACCGATCTTCATTTGAGGAATTATTTTGTGAGTGCGGAGCAGAGGTAATCTACCCACCTGTGCCTTGCGGCACTAAGCGACCGCTTTGCAAAAGGCCATGTTCACGTAAGCATCCTTGCGACCATCCTCCACAGCACAATTGCCACTCTGCTGCAAGTTGTCCTCCATGCATGATGTTTACCACTAAATGGTGTTTCGGACAACATGAGCAGCGCAAAACCATTCCATGCTCACAACAGAGTTTTAGCTGCGGCATGGCTTGCAATAAACCGCTGCCGTGCGGACGACATAAATGTATAAAAACCTGTCACGAAGGTATTTGCCAGGTGGCAGGAGAGATTTGCAAGCAAAGTTGTCCCATACTGAGAGCATCATGTGGTCATAAGTGCATGGCTCCATGTCATGAAGGCGACTGTCCTGAAACCCAGTGCAAGGAAATGGTCGAGGTTCAGTGTGAATGCGGTCATCGTAAACAGATGCGTCCTTGTCATGAGTTAGCACGTGAGTACAGCCGTATTGCTACTGCTCAATTGGCTTCGTCTATGGCTGAAATGCAACGCGGTAATTACATGGAGTTAAGTGAGATTTTAGCTCCAGTCAAGTTTTCTAATAAAACCAACAAAACTCTTGATTGTAATGATGAATGCCGCTTAATGGAACGTAATCGCCGTTTGGCTGTCGGTTTGCAGACACGTAATCCCGATTTACCACAAAAATTAATGACAAAATATTCTGAATTTATACGTAATTTTGCTAAGCGTGACCCGGCTTTGGTGAAATCTGTTCATGAAGCCTTAACCACGTTAGTTAAATTGGCCAAAGAGAGTAAACAGAAATCCCGTTCGCATTCATTTCCCACCATGAATCGTGAAAAGAGACAACTCGTTCATGAAATGTGTGAGATGTTTGGTGTCGAATCTGTGGCTTATGATGCTGAACCAAATCGTAATGTGGTAGCTACGGCCTATAGAGATAGGTGTTGGCTTCCAGCTACCAGCATTATGGATGTTATACAACGTGAATCTGGTCAACGTCGTGTGCCGGTGCCCAGTAATAATGCTTGGGGCTCCAAAAGATAA
Protein Sequence: MSAADSKTQQTIHQPSLSQLWPEFGASSVNDVTAGEVFNRRDGVEDKGDNNPGALGLSSFGKSNSKSNNYVNFNQFIMQHNLLGTNGGGKDEMVNNETAYTNLTNVFNTGDDLLGVNKLSYNNNTNTIGADSFYQRNYYSPGNPLGFSYNQNAANSIFSDDLSSNNMYMGAAAQNLYNRGNNNNSNNNNCNINNSNSYEQLYTPFNSNTTYYANPFATGFDFTATKLQVNAPEFVPRFDKLSLNENQTIWNNKDNELFDEQKTELVAAFNNSHCSSHTQIDEKSAKGEEQEITVKGQEDFVKSAQKYDTSRDKIEKQADDDGGSNNYNPHIQKKSYNRIEKNTERFSRNFLDNKRNDCSPNSNSSASSTGMVQKASGTLNKLTNDANEDKINQTEIVQEKARRFQNSRSRGSIGGGSSMQDYQDREDRFERYVERGERSERGYNSHGHHRVNRDRDYHQRYDSYRSSKRRDDWNRNRDRVNGFRVEEKYSTDNIKDSPLHSPEKKLLHISNSPKKFYPENEKLSQREKLIRDIETRRLECLVCVEPIKGHQGVWSCHNCYHILHLQCIVKWASSSKSDDGWRCPACQNVVKEVPRDYYCFCGKVKNPLQNRQDLAHSCGEVCSRVENCTHACTLLCHPGPCPPCQANVKRECGCGKTTKIMQCCVKDTVECDAICDKLLNCEVHRCQETCHQGKCPPCKEKVEQKCHCSKQERQVACTRESHDKHVYSCGKPCGKDLACGNHKCKDCCHAGECRPCKLSPEIVTSCPCGKMPIVPQQRTSCLDPIPLCEGICGKTLRCGKPAHPHHCTSKCHLGNCPPCNKQTAVKCRCGHMDQMIKCRHLSTRADDARCKKRCVKKRSCGKHKCNQECCIDIDHICPLPCNYTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPLCKRPCSRKHPCDHPPQHNCHSAASCPPCMMFTTKWCFGQHEQRKTIPCSQQSFSCGMACNKPLPCGRHKCIKTCHEGICQVAGEICKQSCPILRASCGHKCMAPCHEGDCPETQCKEMVEVQCECGHRKQMRPCHELAREYSRIATAQLASSMAEMQRGNYMELSEILAPVKFSNKTNKTLDCNDECRLMERNRRLAVGLQTRNPDLPQKLMTKYSEFIRNFAKRDPALVKSVHEALTTLVKLAKESKQKSRSHSFPTMNREKRQLVHEMCEMFGVESVAYDAEPNRNVVATAYRDRCWLPATSIMDVIQRESGQRRVPVPSNNAWGSKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00748665;
90% Identity: iTF_00750139;
80% Identity: -