Basic Information

Insect: Globia sparganii
Gene Symbol: -
Assembly: GCA_949316385.1
Location: OX438659.1:16866112-16874050[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 3.6 3.7e+02 3.0 0.9 1 23 54 77 54 77 0.94

2 20 0.099 10 7.9 4.1 1 23 84 107 84 107 0.97

3 20 5.8 5.9e+02 2.3 4.0 1 23 193 215 193 215 0.96

4 20 0.002 0.2 13.2 1.0 2 23 221 242 220 242 0.97

5 20 2.4 2.4e+02 3.5 1.4 1 23 248 270 248 271 0.94

6 20 0.24 24 6.7 3.4 2 22 504 524 503 524 0.95

7 20 0.099 10 7.9 2.6 1 23 621 643 621 643 0.95

8 20 3.7 3.7e+02 2.9 0.3 2 23 780 801 779 801 0.95

9 20 0.0013 0.13 13.8 0.5 2 23 881 902 880 902 0.96

10 20 0.19 19 7.0 0.3 1 23 910 932 910 932 0.97

11 20 5.7 5.8e+02 2.3 2.6 1 23 969 991 969 991 0.93

12 20 0.00028 0.028 15.9 4.0 1 23 999 1021 999 1021 0.99

13 20 0.12 12 7.6 1.9 1 23 1100 1122 1100 1122 0.99

14 20 0.96 97 4.8 0.1 2 19 1207 1224 1206 1228 0.92

15 20 0.0025 0.26 12.9 1.0 1 23 1293 1315 1293 1315 0.96

16 20 0.0053 0.54 11.9 0.3 1 23 1321 1343 1321 1343 0.97

17 20 0.0077 0.78 11.4 2.6 1 23 1433 1455 1433 1455 0.97

18 20 0.00019 0.02 16.4 1.4 1 23 1461 1483 1461 1483 0.99

19 20 0.96 97 4.8 2.7 1 23 1576 1598 1576 1598 0.96

20 20 0.011 1.1 10.8 5.6 1 23 1609 1631 1609 1631 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	3.6	3.7e+02	3.0	0.9	1	23	54	77	54	77	0.94
2	20	0.099	10	7.9	4.1	1	23	84	107	84	107	0.97
3	20	5.8	5.9e+02	2.3	4.0	1	23	193	215	193	215	0.96
4	20	0.002	0.2	13.2	1.0	2	23	221	242	220	242	0.97
5	20	2.4	2.4e+02	3.5	1.4	1	23	248	270	248	271	0.94
6	20	0.24	24	6.7	3.4	2	22	504	524	503	524	0.95
7	20	0.099	10	7.9	2.6	1	23	621	643	621	643	0.95
8	20	3.7	3.7e+02	2.9	0.3	2	23	780	801	779	801	0.95
9	20	0.0013	0.13	13.8	0.5	2	23	881	902	880	902	0.96
10	20	0.19	19	7.0	0.3	1	23	910	932	910	932	0.97
11	20	5.7	5.8e+02	2.3	2.6	1	23	969	991	969	991	0.93
12	20	0.00028	0.028	15.9	4.0	1	23	999	1021	999	1021	0.99
13	20	0.12	12	7.6	1.9	1	23	1100	1122	1100	1122	0.99
14	20	0.96	97	4.8	0.1	2	19	1207	1224	1206	1228	0.92
15	20	0.0025	0.26	12.9	1.0	1	23	1293	1315	1293	1315	0.96
16	20	0.0053	0.54	11.9	0.3	1	23	1321	1343	1321	1343	0.97
17	20	0.0077	0.78	11.4	2.6	1	23	1433	1455	1433	1455	0.97
18	20	0.00019	0.02	16.4	1.4	1	23	1461	1483	1461	1483	0.99
19	20	0.96	97	4.8	2.7	1	23	1576	1598	1576	1598	0.96
20	20	0.011	1.1	10.8	5.6	1	23	1609	1631	1609	1631	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGCCGCCGAGCGCACAAGTCGGCGAGGTCGCGACTATCGTGCGCCACCTTGAAGGCCGCGTCTGCGGCGACGTGTCTTCGGAGGCATCCTCGGACGCCGCCGAAGATTTTGAATTACCACAGTGCAAGATAAGGAGGAATTACAATTGCACCAAGTGCACGTTCTATACGCAGAACCCGCGCGCTTATCTCGTCCACACGCGTGACGCTCACTTCGTTAGACTCAAGATTTACGATTGTCCACACTGTGTTTACGCATCGAGACATCATCAAAAACTTATAAGGCACGTCAAAATGGTTCACGGAGGATCAAAGCCGACTCCAGCGGCTAGTAAAGGGGAAGCAGAGCTATCACCTCCCTCCAACGATAACATGGAGACAGTAGAGCGCATTGAAGACATGTTTGAGGAAGTCGAGGACTGCGAGGATATGATGATGGAAGTAGATGATGACTCCATGGACCAACCTGATGATATCGACGGCGACTACGATAGGAGTGTTGACTACGCATCGCCCTCTTATCGGAGGGCACATCTGTCAAAAGCTAAGGGCAAATTCTTCTCGTGCGATAAGTGCAATTATGTCACCCACATAAGAGCTAGATTCACAAAGCACGTCAAGTATCATTCGATGCCTATGATTAAGTGTACAATGTGTGATTTTCGAACTCCATACAAGTGGAATTTGGACCGTCACATGAAGAACCACGGTGGAAGTGGGAGTTTCAATTGTTCGATGTGCAACTTCACGGCGGACATCAAGCAGAGTCTGACGGTGCACGAAATGAATCATCACACACCGCCTGCGGGCCAATCGCTGTCGAGTCGCCGTCGCAACCGGGTGGGCGCCAGCGACACGGTTATCACGGAGTTCGACGCAGCGAGCACGTTGCTCCCCAAGGAGGAAGAAGGGAGCGGCGACTCGCGGTCCTCACACTCGGTTTCGGACATGGGTCTCCACTACGCAGATAGAGAACTAGTCAGTTGCAAAAGTGATTCCAATGATGGTACAGCGTCCGACGCGATTACCAGAAAAGAGACTCCGCAAGATGGCTATAACCAGCTTTCACCAACCCACAGCGCAGACGAGAAGCAACAAAAACAAAGCAGAAAGGTTCCCCGACCAATACCACAACTCATACCGTTAAACTCTTCAACACCGAACCAAAAACAAACATGCTCCGGGGAACCGCCACAGAAAAAATTCAAGGAATCCTTACCCATCGACAGTGATGATGTATCTGCTGAAAATACTCTTCTACCAGCAAATACATTAATAAAAGAGACTGGAGGTCGCAAGAAAAATGAATCATTCTTCGACAGATTAAAAGAAAGACTGTTAACAGAAACAGGCGAAGAAGGCTCATTAATATGCAAGATTTGTGGATTTGAAAGTAAATGCTTATCAGAACACTCTGTCCACGAGAAAAATTGTTCGCCGCAAACGAACCGGATCAATGCAAACACGTCGCTCAAAAGTTTAAGTTCCACTCGATGCCAGAATTGCAGACACAGATGTAAATCTAGCGCCGACTTATACATCCACATGCAAACTTGCGGAAAGAGCGAAATGATCGACGATGAAAACGCTAACAAAAACGAAAATAGTAATGATGAAGTCATTCCAATCCATGAAAAAGAGACTGAACCGCATCCAATGGAAAACGTCGTTTTCGTATGGAACAACATCAATCATGACCCTAACAAGTTTGATGTACCTCTAGACATAAACATAAATGATGATTCCACTCTACCAGAAATACATCGAAGTTTTGACACTGAAATTGTTGATGAAAATGAAAGCATGAATTTATCGCCAAGTCAAGCTATTGGaaggaaggtatttaaatgtcCACATTGTCCATTTTTCTCCACAACAGCGTCCAGATTTCACGTTCATATCGTGGGCCACTTGAACAAGAAACCATTTGAGTGTTCTCTCTGTAAATATAAATCTAATTGGAGATGGGATATAACCAAACACATTAAATTGAAATCTGCGAGGGATCCTGAGCATAACGAAGCAAAAGTACTAATGACTGACGAAACAGGAAGAAGAAACTAtagcaaatataataaattcttAGCAATGCCTGTGTTAAATGAAAATGGCGAAAATGAGTTTCATTACCTGGATCCTAACACTGCAGTCGATAGCTCGATGGAAATGGATGAATCATTTAATGATATATCAGACGTTATGAATGTTCAATTTGAAATGCAACCGCTTAACTTACAAACTCAACACAGTGAAGATAATTACAACTTTATTGATAACAGAGGTCTCAGTGATATGAAGAAACCCAAGAAAACATTATGGAAATGTAAAAGATGTAATTACAAagaTCCCTCAAGAGAAGCTCTTTTAGATCATGTTCGTGAACACTCCAGATCGGATGGGGTTCATGACGAACTAAACAAACCGCCTATTAAGAAACCTGAAAATAATACTCCTGACCCAGCAGACCTGGCGTATCGTTGTGGCCATTGTAACCAATTGTCTAATTGGAAACATGTCATACAGcGCCATTGCCGATTAAAACACGACGGAGTGATCAAAGTGATAACTACAGTTAAACCAAAACCGGACCCACCAATGAACATCAATGAGATCAACATTGACACTTGCAACAAATGCCCGTACAGGACGAGTGACAAGAAACTACTCATTGCTCATTTACAACAGCATCAGCCATCGCCGAACTCTATTTTCAAGTGCTACTTCTGCCCTTTCTTCGTAAAGGATGAGCCAGAATTAATCTCACATCTACTCCTGCACGGAATCACTGACCCAGAAGATTACATCGCAAAAGCAATGGGAACTAAATCCCCAGGACCACCAGAACCGCAAACACCTGTTACTACGACATTAAACTCCACCAAGCGTCACAAATGCATAGAATGTCCATACGAAACAAATAGCAAGTCACAATTCATGTACCACGAACAATTTCACCGACTTCCGGCTGATACGCCTTATAAATGTCCAGAATGCAACTACAGCGTATCTAAGAGACACCTGCTGCACCAGCATCTGCGAGTACATGGAATCAAAAGAATTGAAACTGAGGCTGAATTAGAAGCAGCACAAAGCAAGGTAGCTAAAATGGATTTCCATATTAATCTTGAGGAAATACCCTATGTCTGGGTTTCGGCCAAGAATGAGTTTCATAAAATGTACAAGTGCCGATATTGTTCATATGTTAACGctgtaaaaagtaaaataccaAATCATGAAAAAATTCATTGCATCGTATTCGAAAACAATGATACAACTATTTACAAGTGTTTGGAATGTAAATTCACATGTGATAACGCCGGCAGACTAGCCGAGCATTCCAAAACTCACGGGGAAATATATGGTCGCATTTATTGTCCCGTTGAATATGATGTGCCCGATGATGAACAAATCACTAAATTGAGAAAAGTTATAGAAATTGAAAAGTCAGCAAATCCAGAAAGTTTCACTAGAGATGAAGGCACTACGCACGAATtaagagaaataaaattattatatttttgtcaaaAGTGCCCGGCAAGATTCCTTGAAGACGGCGAACTAGACGTTCATGAAAAATGTCATGCTGTAACATTGccaaataaatgtaaaatttgTGACTTTTCGGTCACCGAAGAAAATGAATTAGCGGCACACGATACCGTGCACACAGATGAATATCACACAAAAACGAAGATGCTTAAATTTGTTCACCACTCACATCCTTTGCACAAACAACCCATGCTAGATTTTGTTCTCTGTCAAAATACTTCAGAAATTACGTGGCGAGCCACTGGGCCAAGTAAACCTGAACATGTCGAAAGTCCTATGAAAAAAGATACTAAACACGTGccaaaacaatattattgcaAACAATGTCCAGCCAAGTTCTTCAAAAGTTCTGCGCTTACCTATCACATGGGGCTACACGGAGGTGATGGCGAGTTTAAGTGCAAGAAGTGTAATTACGCCGTGAAGAACGTTGGAAATCTAGGCAAACATGAATTAGTTCACGAAAATGAGAACAAGGCTACAACTTGTGATTATGAATCTAGTGAAGATAtggattataaaaatattcctttGTCGGGCACAGATTTGTTCCAAAGAAAGACTGAGGCTCAGAAAAGAGTATTAACTGATAAAGATAAGTTAGTTAAGCCGAACGATCATTTTCCGCCTGTCTTACAAGCCGATCCCCAATTCGGTTATTTAATGCATGGTAATCCTGAATTTATATATCCCACATACCTGAAAAATGGACGTCAAAAAGAAAAGCGATACAAATGCCACAAGTGCCCCTCAGCTTTTGAGAAAAGAGAACAATATAAAATTCATTTGTCATTGCACGGCTCCAAGCAAAGATATAAATGTGAGTTATGTGATTATTCAGTAAAATATTACGCTAATTACGTTCAACATATGCGAAAACATCAAATGAACGATGAAGCTCaagctgaaagaaagaaagataataaTGATTTTACAGAATCTGAACATCAAGAAGACGTTAAGCAAGACGATAGCAGTGATAACATTAAACTTGCAATAAAAACTATGCCAAAAGGAGGTGCTAAGAGCGACTTTCAACAATTCTCCATTAGCGACCAGCAAACGCTCAGACTGCTGCAGAGGAGACGGTCAATGAATAATAATTCTGGAAAGGACCACAACACTTCTGAAACTTCGCTGATCAAAGAGCGCAAAATGCACATGTGTCTGTTATGTCCCTACACTAACCAACGTCAAGATTCTTTAAGTAATCATTATAGAAGGCACGGAGACACCGATGTTGTGAACGGAGGAAGTCATAAATGTTCCCATTGCGACCTAGTGGTTGTTCAGTCGCATTTCCTTCGGGAACATCTGAAGACACACTTCAATTACCACAAAACTCTTATTCCCGAATGTTTTGTGGCTAACGAAGCTGTTAGTTTTACCATAACCAAGTTGGACGAAGACAGTGAATCAGTTGATCTCAAATTAGACATGCAGAACAAGAGTTTTGCATGTAATGAtgaaaagatatttgtaaaaattaaaactggAGAATTATTGGTAGAATAA
Protein Sequence: MLQQMSSPPSAQVGEVATIVRHLEGRVCGDVSSEASSDAAEDFELPQCKIRRNYNCTKCTFYTQNPRAYLVHTRDAHFVRLKIYDCPHCVYASRHHQKLIRHVKMVHGGSKPTPAASKGEAELSPPSNDNMETVERIEDMFEEVEDCEDMMMEVDDDSMDQPDDIDGDYDRSVDYASPSYRRAHLSKAKGKFFSCDKCNYVTHIRARFTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFNCSMCNFTADIKQSLTVHEMNHHTPPAGQSLSSRRRNRVGASDTVITEFDAASTLLPKEEEGSGDSRSSHSVSDMGLHYADRELVSCKSDSNDGTASDAITRKETPQDGYNQLSPTHSADEKQQKQSRKVPRPIPQLIPLNSSTPNQKQTCSGEPPQKKFKESLPIDSDDVSAENTLLPANTLIKETGGRKKNESFFDRLKERLLTETGEEGSLICKICGFESKCLSEHSVHEKNCSPQTNRINANTSLKSLSSTRCQNCRHRCKSSADLYIHMQTCGKSEMIDDENANKNENSNDEVIPIHEKETEPHPMENVVFVWNNINHDPNKFDVPLDININDDSTLPEIHRSFDTEIVDENESMNLSPSQAIGRKVFKCPHCPFFSTTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAMPVLNENGENEFHYLDPNTAVDSSMEMDESFNDISDVMNVQFEMQPLNLQTQHSEDNYNFIDNRGLSDMKKPKKTLWKCKRCNYKDPSREALLDHVREHSRSDGVHDELNKPPIKKPENNTPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVITTVKPKPDPPMNINEINIDTCNKCPYRTSDKKLLIAHLQQHQPSPNSIFKCYFCPFFVKDEPELISHLLLHGITDPEDYIAKAMGTKSPGPPEPQTPVTTTLNSTKRHKCIECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHLRVHGIKRIETEAELEAAQSKVAKMDFHINLEEIPYVWVSAKNEFHKMYKCRYCSYVNAVKSKIPNHEKIHCIVFENNDTTIYKCLECKFTCDNAGRLAEHSKTHGEIYGRIYCPVEYDVPDDEQITKLRKVIEIEKSANPESFTRDEGTTHELREIKLLYFCQKCPARFLEDGELDVHEKCHAVTLPNKCKICDFSVTEENELAAHDTVHTDEYHTKTKMLKFVHHSHPLHKQPMLDFVLCQNTSEITWRATGPSKPEHVESPMKKDTKHVPKQYYCKQCPAKFFKSSALTYHMGLHGGDGEFKCKKCNYAVKNVGNLGKHELVHENENKATTCDYESSEDMDYKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKDNNDFTESEHQEDVKQDDSSDNIKLAIKTMPKGGAKSDFQQFSISDQQTLRLLQRRRSMNNNSGKDHNTSETSLIKERKMHMCLLCPYTNQRQDSLSNHYRRHGDTDVVNGGSHKCSHCDLVVVQSHFLREHLKTHFNYHKTLIPECFVANEAVSFTITKLDEDSESVDLKLDMQNKSFACNDEKIFVKIKTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01231174;
90% Identity: iTF_00726922;
80% Identity: -