Gale027645.1
Basic Information
- Insect
- Glaucopsyche alexis
- Gene Symbol
- retn
- Assembly
- GCA_905404095.1
- Location
- FR990057.1:7744211-7751449[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-19 3e-15 57.5 0.0 16 89 2 73 1 73 0.95
Sequence Information
- Coding Sequence
- ATGAACGGAACCCCCATAACCCGTCTGCCAGTCATGGCCAAGACGGTGCTAGACCTCTGCGAGCTGTACAACCTGGTGGTGGCCCGCGGAGGGTTGGTGGCGGTGATCAACAAGAAGCTCTGGCAGGAGATCATTAAAGGGTTAAACCTGCCCTCCTCCATCACGTCGGCCGCGTTCACGCTGAGAACACAATACATGAGATTCCTATACGACTACGAGTGCCACAAGAAGAACTTCTCGACGAAGGCGGAGCTGGACGTGGCCATCGAGGGCAACAAGAGGGAGGGCAGGCGCCACTCCGTCGCCGCCAACCAGTACGCGCAGGAGCCGCAGTTCAATCGCATGCCGTCGGTGGCGTCGTACTCCCCGCACATGCAGCCCGTGCTGCCCGGCGGTCCCATGCCGCACCTGCCCTCGCTGCCGCTCCACCCCTCGCAGTACTCCCAGAGGGACATGGAGAACTTACAGAAACTGGCCCGCATGATACAGGAGCACCAACGCGAATTCCTACGCAACGCGGAGTCCCCACCATCGGCGATGGACATGACGCAGATGTGGTGGAACCTGTACAACCCGCAGACCGTCAACCTGGAGCCGCAGCGAGAGGCCTTGAACCTGGCGGAGAGCCCGAGCAACGGCATCAAGCGCGAGGCGAGCCCCcctcccgccgcgccacccaaGCGTCGCGTCACTCACTCCTCCTCCATGTCCATATCGCCGTCCCGCTCGCCACACTACCGCTCGCCGATGCACTCGCCCCGGGCGGCGCGCGCGCCCCGCTCGGTGTCGCCCCGGGCGTCGGTGTCGCCCCGGGCGGTGTCCCCGCACGTGTCGCCGCGCGTGCCCGCGCACAACCTGCCCACGCCGCCGCCGTCGCTCACGCACGCGCACGCGCACCACAACGGCTCGGCCTCCATACTCAACGGCGCCTCCTTTAGGATAACATCCAAAGgcGACACAAGCACTGGAGACCAGGAGCTGAACGTCTCCATCGACCTGAACGGCATCACATACGAGGGCATCCTCTACCCCTCGCAGAACGGCATGTAG
- Protein Sequence
- MNGTPITRLPVMAKTVLDLCELYNLVVARGGLVAVINKKLWQEIIKGLNLPSSITSAAFTLRTQYMRFLYDYECHKKNFSTKAELDVAIEGNKREGRRHSVAANQYAQEPQFNRMPSVASYSPHMQPVLPGGPMPHLPSLPLHPSQYSQRDMENLQKLARMIQEHQREFLRNAESPPSAMDMTQMWWNLYNPQTVNLEPQREALNLAESPSNGIKREASPPPAAPPKRRVTHSSSMSISPSRSPHYRSPMHSPRAARAPRSVSPRASVSPRAVSPHVSPRVPAHNLPTPPPSLTHAHAHHNGSASILNGASFRITSKGDTSTGDQELNVSIDLNGITYEGILYPSQNGM*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01247872; iTF_00403553; iTF_00164107; iTF_00933485; iTF_01178190; iTF_00405714; iTF_00934523; iTF_01217280;
- 90% Identity
- iTF_01178190; iTF_00164107; iTF_00403553; iTF_00933485; iTF_00405714; iTF_00934523; iTF_01217280; iTF_01247872;
- 80% Identity
- -