Pari035119.1
Basic Information
- Insect
- Phengaris arion
- Gene Symbol
- retn
- Assembly
- GCA_963565745.1
- Location
- OY751450.1:6183547-6196152[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-19 2.2e-15 58.0 0.0 12 89 2 77 1 77 0.94
Sequence Information
- Coding Sequence
- ATGTTCTCGAGTAATCTAGGAACCCCCATAACCCGTCTGCCCGTCATGGCCAAGACGGTGCTGGACCTCTGCGAGCTGTACAACCTGGTGGTGGCCCGCGGAGGGTTGGTGGCGGTGATCAACAAGAAACTCTGGCAGGAGATCATCAAAGGGTTAAACCTGCCCTCCTCCATCACGTCGGCCGCGTTCACGCTGAGAACACAATACATGAGATTCCTGTACGACTACGAGTGCCACAAGAAGAACTTCTCGACCAAGGCGGAGCTGGACGTGGCCATCGAGGGCAACAAGCGGGAGGGCAGGCGCCACTCCGTCGCCGCCAACCAGTACGCGCAGGAGGTGCAGGCTCAGGCTGCTTTGTCTATGCCGCAGTTCAACCGCATGCCGTCGGTGGCGTCGTACTCCCCGCACATGCAGCCCATGCTGCCCGGGGGCGGCCCCATGCCGCACCTGCCGTCACTGCCGCTCCACCCCTCGCAGTACTCTCAGAGGGACATGGAGAATTTACAGAAATTAGCCCGCATGATACAGGAGCACCAACGCGAGTTCCTACGCAACGCGGAGTCCCCACCATCGGCGATGGACATGACGCAGATGTGGTGGAACCTGTACAACCCGCAGACCGTCAATGTGGAGCCGCAGCGCGAGGCTTTGAACCTGGCGGAGAGCCCGAGCAACGGTATCAAGCGCGAGGCGAGCCCCCCTCCCGCCGCGCCCCCGAAGCGCCGCGTCACTCACTCCTCGTCTATGTCCATATCGCCGTCCCGCTCTCCTCACTACCGCTCGCCGATGCACTCGCCCCGGGCGGCGCGCGCGCCCCGCTCGGTGTCGCCCCGGGCGTCGGTGTCGCCCCGGGCCGTGTCGCCCCACGTGTCGCCGCGCGTGCCCGCGCACAACCTGCCCACTCCGCCGCCGTCGCTCACGCACGCGCACGCGCACCACAACGGCACGGCCTCCATACTCAACGGCGCCTCCTTTAGGATAACATCCaaaggtgaCACAAGCACTGGAGACCAAGAGCTGAACGTCTCCATCGACCTGAACGGCATCACATACGAGGGCATCCTCTACCCCTCGCAGAACGGCATGTAG
- Protein Sequence
- MFSSNLGTPITRLPVMAKTVLDLCELYNLVVARGGLVAVINKKLWQEIIKGLNLPSSITSAAFTLRTQYMRFLYDYECHKKNFSTKAELDVAIEGNKREGRRHSVAANQYAQEVQAQAALSMPQFNRMPSVASYSPHMQPMLPGGGPMPHLPSLPLHPSQYSQRDMENLQKLARMIQEHQREFLRNAESPPSAMDMTQMWWNLYNPQTVNVEPQREALNLAESPSNGIKREASPPPAAPPKRRVTHSSSMSISPSRSPHYRSPMHSPRAARAPRSVSPRASVSPRAVSPHVSPRVPAHNLPTPPPSLTHAHAHHNGTASILNGASFRITSKGDTSTGDQELNVSIDLNGITYEGILYPSQNGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00744392;
- 90% Identity
- iTF_00744392;
- 80% Identity
- -