Ctho007120.1
Basic Information
- Insect
- Cyclargus thomasi
- Gene Symbol
- retn_1
- Assembly
- GCA_026546445.1
- Location
- JAOTAV010002172.1:1-4393[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.6e-18 1.7e-14 54.3 0.0 18 89 1 70 1 70 0.94
Sequence Information
- Coding Sequence
- ACCCCCATCACCCGCCTGCCGGTGATGGCGAAGACGGTGCTGGATCTCTGCGAGCTGTACAACCTGGTGGTGGCTCGTGGTGGTCTGGTGGCCGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGAACTTGCCCTCGTCGATTACGTCAGCTGCTTTCACTTTGAGGACACAATACATGAGATTTCTGTATGACTACGAGTGCCACAAGAAGAACTTCTCTACGAAGGCAGAACTTGACGTGGCTATTGAGGGCAACAAACGAGAGGGCCGCCGCCACTCCGTCGCCGCCAATCAGTACGCGCAGGAGGTGCAGGCGCAAGCGGCTTTGTCTATGCCGCAGTTCAACCGCATGCCGTCAGTGGCGTCATATTCTCAACACATGCAGCCAGTACTACCCGGAGGGGGGCCCATACCACACCTGCCCTCCCTTCCCCTCCACCCCTCGCAGTACTCTCAGAGAGATATGGAGAATCTCCAAAAGCTGGCCCGCATGATACAGGAACACCAACGCGAGTTCCTACGTAACGCGGAGTCGCCGCCGTCAGCGATGGATATGACACAGATGTGGTGGAACCTGTACAACCCCCAGACCGTCAACCTCGAGCCGCAACGCGAGGCGCTCAACCTAGCGGAGAGTCCCAGCAACGGCATCAAGCGCGAGGCGAGCCCCCCTCCCTCCGCACCCCCCAAGCGCCGCGTCACTCACTCCTCGTCCATGTCCATATCACCGTCCCGCTCCCCCCACTATCGCTCTCCCATTCACTCGCCCCGGGCTGCGCGCGCGCCGCGTTCCGTCTCGCCCCGCGCGTCGGTCTCGCCCCGCGCCGTGTCGCCGCATGTTTCACCGCGCGTGCCGGCACACAACCTGCCCACGCCGCCTCCCTCACTGACGCACTCACACAACGGCACGGCTTCTATACTCAACGGAGCCTCCTTTAGAATAACGTCTAAAGgcgacaccagcacgggtgaccaggagctgaatgtctccatcGACCTGAACGGCATCACATACGAGGGAATACTCTATCCCTCGCAGAACGGCATGTAG
- Protein Sequence
- TPITRLPVMAKTVLDLCELYNLVVARGGLVAVINKKLWQEIIKGLNLPSSITSAAFTLRTQYMRFLYDYECHKKNFSTKAELDVAIEGNKREGRRHSVAANQYAQEVQAQAALSMPQFNRMPSVASYSQHMQPVLPGGGPIPHLPSLPLHPSQYSQRDMENLQKLARMIQEHQREFLRNAESPPSAMDMTQMWWNLYNPQTVNLEPQREALNLAESPSNGIKREASPPPSAPPKRRVTHSSSMSISPSRSPHYRSPIHSPRAARAPRSVSPRASVSPRAVSPHVSPRVPAHNLPTPPPSLTHSHNGTASILNGASFRITSKGDTSTGDQELNVSIDLNGITYEGILYPSQNGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00744392;
- 90% Identity
- iTF_00744392;
- 80% Identity
- -