Gspi010746.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- Paxbp1
- Assembly
- GCA_959613385.1
- Location
- OY390733.1:31917785-31920118[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-31 1.5e-27 98.0 0.2 3 272 498 705 496 707 0.92
Sequence Information
- Coding Sequence
- ATGTCTCTTTTTCGAAAACCAAAAAAGAACATACAACGAAGAGTGTTTACAGAAAAAGACGAAGAAGATGACGAGGAACCCATGGAAGTTGCTGGTCACAAGGACAAAGAActcaaaagaaaagaaaaggtGAAAACTCAAGTCAAGACACAATCTTTACTTAGTTTCGAAACAGAAGAAGAAGGCGAAGTGTTTCAAGTAAAGAAGTCGACGCACAGTAAGAAAATGATGCGTATGTATGAAAAGGaacgaaagaaaaaagaagttaAAGTCGACAAAGAAGAATTTAAGGAAATTAAACAGAAAGAAAAATCTACGGAAATAGTTACAGATGACCTAGTTCTAGTTGTGAATGCAAGCCATAAAGCAGTTACGCCACCCCCGCCCATATTGAGTGGCCGCGATGCTTTATGCGCCGGAAGAGATGACATGTCATCAGAAGAAGATGAAACACTAAGTAGTCATCGGTTTTCGAAGCCTGATAATGTTAAGCGGGTTTTGGAATCGGGAGCTATTCCCGATGCTGCTATGATACATGCCGCACGAAAAAGAAGACAACGTGCAAGGGAATTAGGTGGCGATTACATTCCTGTAGAAGAGGAAGAAGTTGAAGATAAGGGTCGTCTGTTAAGAGATGATGATAATGATGGAAGTGACGAAGAAAGGATTGATATGGGTGCAAATCCAGTAATTAGAGACCAAGAGCGCAGGCGTGAACAATTTTATGAAGCACAAGAATCAGATCATGAAATAGACGAGTGGGAAGATCAACAGATTAGAAAAGGTGTAACTGGAGCTTCATTAAATCAAGAGTTGCTTTATAACGAATATCAAATTGCGAGTGTTGTTCAACCGATTCCGGCAACACCAAAAATTGATCCCGATGTACCTAGAACACCGCAAGCGATTGTTGAAAAGTTACGTGAACATTATGAGAACGTATGCGCGTCTAGAGATAGTAATgttaagaaattacaacaaactcAAGATGACATAATGAATATAACGAAGGAATTGGAAGAGCTTAAAATTAAAGCTCCAAAGGCTGCAGACCGTTTTAGATTTTATCAGGAATTACGTGGGTATATAACCGATTTGGTTGAATGTTTAGATGAAAAAGTTGGAATTATTAGTAGCTTAGAACAACGAGCGGTTGATATAATGGCAAAAAGAGCCGAGTGGTTAATTGAGCGTCGCAGGCAAGATGTGAGGGATCAGgcagaagaaattacaaatatgggTAAAGGAGGTATGTTGAGAAAAaatgaagatgaagaaaaaatgaggAGAGCTGTTGAAAGGGAAGGAAGAAGAACACGTCGCCGTAGATGTAGGGAAGCCGCAGGTGAACCAAAACATGTTGAAGGTATGTCAAGTGATGAGGAAATACCCCAACAAGACATGTTGACATTTGATAAAGAACGagaacaaattgaaaatgacgTCCAGACAGTATTTGATGACGTTGTCGATGAATATTCATCGGtggcaaatattttgattaaattcgaACATTGGAGAGAAACAGATATGCATGCGTACACTGAAGCATATGCCACTTTATGTTTACCAAGAGTTGTAAGTCCATTAGTTAggcttaatttaatattttgggaTCCTTTAACAGATACAGCTGATTTAGAGAAATTGGAGTGGTATCGAACACTAGCTCTTTATGGATTACACGATGACGAAACAGAAATGACCTTATCACAAGATCCAGATGTTAATTTGCTCCCGAGCATTATTGATAAAGTGATCATaccaaaattaacagaattggTTGACCGCTGTTGGGATCCATTATCAAGTACGCAAACTTTAAGACTAGTGGGGGTTATTAGCAGGTACATTCGCCGGTTTCCCTCACTTGGACCCGACAGCAAATCcctgcataatttatttaatgcgaTAATGCATAAGCTCAAAGGTGCACTTGAGAACGATGTTTTCATACCCATATTACCAAAATTAGCAGAGACCAAATCTCCATTTTTCCAAAGGCAATTCGCAAGTGGATTAAAACTCTTGCGTAACATTACCAGCTGGCAAGGTATTCTTAACGATAAGACCTTGAAAGATCTTGCACTTAATTCACTTCTTAATCGCTACCTACTCTCCGCCATAAAAGTATGTTTATTGACAGATGCTGTTTCAAAAACGGGACTCGTTAGCCTAATATTACCACGAATATGGTTACAAAGTGATACACCACAATTACAAATGTTTAGTGCATGTGTTACTAACTTGGCACAACAGCTTGATAAGGACAATCCTTTGCATTTGGAGTCGATAGAAACTTTaacgaatatattaaaatcattaaaaaattaa
- Protein Sequence
- MSLFRKPKKNIQRRVFTEKDEEDDEEPMEVAGHKDKELKRKEKVKTQVKTQSLLSFETEEEGEVFQVKKSTHSKKMMRMYEKERKKKEVKVDKEEFKEIKQKEKSTEIVTDDLVLVVNASHKAVTPPPPILSGRDALCAGRDDMSSEEDETLSSHRFSKPDNVKRVLESGAIPDAAMIHAARKRRQRARELGGDYIPVEEEEVEDKGRLLRDDDNDGSDEERIDMGANPVIRDQERRREQFYEAQESDHEIDEWEDQQIRKGVTGASLNQELLYNEYQIASVVQPIPATPKIDPDVPRTPQAIVEKLREHYENVCASRDSNVKKLQQTQDDIMNITKELEELKIKAPKAADRFRFYQELRGYITDLVECLDEKVGIISSLEQRAVDIMAKRAEWLIERRRQDVRDQAEEITNMGKGGMLRKNEDEEKMRRAVEREGRRTRRRRCREAAGEPKHVEGMSSDEEIPQQDMLTFDKEREQIENDVQTVFDDVVDEYSSVANILIKFEHWRETDMHAYTEAYATLCLPRVVSPLVRLNLIFWDPLTDTADLEKLEWYRTLALYGLHDDETEMTLSQDPDVNLLPSIIDKVIIPKLTELVDRCWDPLSSTQTLRLVGVISRYIRRFPSLGPDSKSLHNLFNAIMHKLKGALENDVFIPILPKLAETKSPFFQRQFASGLKLLRNITSWQGILNDKTLKDLALNSLLNRYLLSAIKVCLLTDAVSKTGLVSLILPRIWLQSDTPQLQMFSACVTNLAQQLDKDNPLHLESIETLTNILKSLKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01258024; iTF_00068047; iTF_01120872; iTF_01498885; iTF_00627209; iTF_00956308; iTF_00307898; iTF_01123721; iTF_00988407; iTF_00434114; iTF_00464858; iTF_00466197;
- 90% Identity
- -
- 80% Identity
- -