Dhop017147.1
Basic Information
- Insect
- Dorcus hopei
- Gene Symbol
- Paxbp1
- Assembly
- GCA_033060865.1
- Location
- CM065422.1:160142-162487[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-32 7.5e-28 99.4 0.1 3 271 502 708 500 711 0.93
Sequence Information
- Coding Sequence
- ATGTCGCTGTTTCGTAAGCCAAAAAGGAATATACAAAGGCGTGTCTTTTCCGAAAACGACGGCGATGAAGAGGAGCCCATGCAGGTTAATAGCAGCAGCGCTAAGGAAAAAGAATCAACAAAGAAAAGCAAGGACGGAAAAGCAAAACCGCAGGTGAAATCCTTGCTCAGTTTCGAAACTGAGGAAGAAGGTGAagtgttccaaattaaaaagtcCACTCACAGCAAGAAAGTCATGCGCATGTACGAGAAGGAGCGCAGGAAGAAGGAGGCGAGAAACGAGAAAGAAGAGGCAAGAACCAAGGAAAAGTTGACGGAAATCGTAACTGATGATCTAGTTTTGGTCGTCAATCCAAGTCACGTGACCCCAACGCAACCACCACCACCCCCTCCGCCTCCAATTCTAAGCGGTCGGGATGCTCTCTGCGCTGGCAGAGACGACATGTCCTCAGATGAAGACGAATCATCGACGAGCCATCGTTTTTCAAAACCGGACAATTTTAAGCGCGTGTTAGAATCAGGTGCGATTCCGGATGCCGCAATGATACATGCTGCTAGGAAGCGTAGACAGCGTGCTAGGGAGTTTGGGGGTGACTACATTCCGGTGGAAGAAGAGGAAATAGAAGATAAGGGCCGTTTGCTGCGGGAAGATGACAATGAAGGAAGCGATGAGGAACGCATTGACATGGGGGCAAACCCGATCATCAGGGATCAAGAACGTAGGCGGGAGCAATTTTACGAGGCACAAGATTCTGACCATGAGATAGATGAGTGGGAGGATCAGCAAATCCGGAAAGGTGTGACAGGAGCGTCTTTGAACCAGGAATTAATTTATAGCGAATACCAAGTGATTAATCCGGTGGTGACACAGCAAACTGTTCCGAAGATTGACCCGGAAGTGCCGAGGACTCCGGAAGCTATCGTGGAAAAGTTGCGTGAGCATTATGAAAATATGTGCGCATCTAAGCAAGCAAATGTTAAGAAACTGCTGCAGATTCAAGACGATGTGGTAAACGTCACTAAAGAATTGGAAGTGTTGAAGGTGAAAGCTCCGAAGGCCGCAGAGAGATTCAGGTTCTACCAGGAACTACGAGGATATATTACTGACTTGGTGGAATGTCTGGACGAGAAGGTGGGAATTATAGCAAAGTTGGAAGAGCAAGCTATGGATTTAATGGCAAAAAGAGCGACTTGGCTTATTGAACGTAGGCGGCAAGACGTTAGGGATCAAGCCGAGGAAATAACCAACATGAGTAAATGCGGTCTAATCAGAAAAACTGAGGACGAGGAAAAAATGCGTAGGGCTGTTGAGAGAGAAGGTCGAAGAACTCGAAGACGGAGAGCCCGTGAGGCCGCTAGTGAACCAAAACATGTTGAAGGTATGTCCAGCGATGACGAAATTCCACAGCAAGATATGCTAACCTTCGATAAAGAACGAGAGCAGATAGAACGGGAAATACAGATGGTATTTGAGGGTGTGGTCGATGAATATTCGTCGGTGGCAAACATATTAATCAAATTCGAGCAGTGGCGAGAACACGACATGCCTGCTTACAATGATGCCTATGCCACTCTTTGCCTACCAAAAGTCGTAAGTCCATTGGTTAGGCTTAACTTGATATTCTGGGACCCCCTGACTGACAATGCCGACTTGGAAAAATTGGAATGGTACAGAACGCTTGCCCTCTACGGTTTACACGATGACGAAACTGAAACGAGTCTGTCACAAGACCCAGACGTTAATCTACTCCCAAACATCATACAAAAAGTAATCATTCCGAAACTAACTCAGTCAGTAGACCGTTGTTGGGACCCTCTATCAAGTTCACAAACTTTAAGGTTAGTGGGAATCGTGAGCAGATTTATCAGGCGTTTTCCTACCCTAGGCCCCGGCAGTAAAATTCTTGCCAACTTATTCAATGCGATCCTCCATAAATTAAAAGGTGCTCTAGAAAATGACGTCTTCATACCTATTATGCCTAAACTGGCCGAGAGTAAATCGCCGTTCTTTCAAAGGCAATTTGCAAGCGGCTTGAAACTGTTGCGTAACATCACCAGCTGGCAGGGAATCTTGAATGATAACACACTGAAAGACGTGGCTctgaatttgctgttaaatCGATATCTGCTCAGTGCCATCAAGGTGTGCCAGTTGACGGATGCAGTTGCAAAAACTTCATTGGTCAGCTTCGTCTTGCCCAGGATATGGTTGCAAAGTGATACTCCACAGTTGCAGATGTTCAGTATATGTGTTACAAATCTGGCACAACAACTGGATAAAGATAATCCCTTGCATTTAGAATCAATAGAAACATTAGCTAATATATTGAAGTCTTTAAGGAATTAA
- Protein Sequence
- MSLFRKPKRNIQRRVFSENDGDEEEPMQVNSSSAKEKESTKKSKDGKAKPQVKSLLSFETEEEGEVFQIKKSTHSKKVMRMYEKERRKKEARNEKEEARTKEKLTEIVTDDLVLVVNPSHVTPTQPPPPPPPPILSGRDALCAGRDDMSSDEDESSTSHRFSKPDNFKRVLESGAIPDAAMIHAARKRRQRAREFGGDYIPVEEEEIEDKGRLLREDDNEGSDEERIDMGANPIIRDQERRREQFYEAQDSDHEIDEWEDQQIRKGVTGASLNQELIYSEYQVINPVVTQQTVPKIDPEVPRTPEAIVEKLREHYENMCASKQANVKKLLQIQDDVVNVTKELEVLKVKAPKAAERFRFYQELRGYITDLVECLDEKVGIIAKLEEQAMDLMAKRATWLIERRRQDVRDQAEEITNMSKCGLIRKTEDEEKMRRAVEREGRRTRRRRAREAASEPKHVEGMSSDDEIPQQDMLTFDKEREQIEREIQMVFEGVVDEYSSVANILIKFEQWREHDMPAYNDAYATLCLPKVVSPLVRLNLIFWDPLTDNADLEKLEWYRTLALYGLHDDETETSLSQDPDVNLLPNIIQKVIIPKLTQSVDRCWDPLSSSQTLRLVGIVSRFIRRFPTLGPGSKILANLFNAILHKLKGALENDVFIPIMPKLAESKSPFFQRQFASGLKLLRNITSWQGILNDNTLKDVALNLLLNRYLLSAIKVCQLTDAVAKTSLVSFVLPRIWLQSDTPQLQMFSICVTNLAQQLDKDNPLHLESIETLANILKSLRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00740832;
- 90% Identity
- iTF_01258024;
- 80% Identity
- -