Gspi013842.1
Basic Information
- Insect
- Geotrupes spiniger
- Gene Symbol
- TFIP11
- Assembly
- GCA_959613385.1
- Location
- OY390734.1:24218564-24223421[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-97 1.2e-92 311.5 11.3 1 275 398 669 398 669 0.98 2 2 0.33 4.2e+03 -1.9 0.1 244 270 683 709 674 716 0.54
Sequence Information
- Coding Sequence
- ATGTCAGACGACGAGAtggaaaaattcgaaattacGGACTTCGACATCGAAAACGAATTTAACATCAACCGACCAAGACGGCGACTCACCAAACATCAACAAATATACGGTATTTGGGCCGACGACAGCGACAATGAAACCGATAATCGGTCCTCCTTTAAAGCCAAGAAGGCTCCTAAAAATTACACGGCTCCGATAGGCTTTGTCGCCGGTGGTGTGCAACAAGCCggtaagaaaaaagaaaaagacgGTGCCGTCAAGAAGGAAGAGAGCGATGATTCTGAAAACGACCGTCCGTCCACGtcttttaaagtaaaaaatagcTCTAGTGAATCAGAAGAGGAGATATTACCAAGATCAGGATTTGGAAATCAACGATCGAGGCAGCAGGCCACCGTTACTGAAATTACAGGAGACATAGCCGGCTTGCGAAATAAACGGACAGCTTCTAATAACAGGTTGATCAATCAGGGAGTGGGCAACTGGGAAAAACATACGAAAGGAATAGGGGCAAAGTTATTACTTCAAATGGGTTTCCAACCTGGGAAGGGCCTCGGTAAAGATTTACAGGGGATTTCGGCACCGGTTGAGGCGCATTTAAGAAAAGGACGCGGTGCTATAGGAGCATATGGCCCAGAAAAAACTCCTAGTATTGCAATCAAAAAGgaTGAGAAGAATGACGTGGACAATTCTGACGCTGAAACGAAATGGAAGAAAGACGACATGAACAAGAAGAAAACTCGATATTACTACAGAAGTGTTGACGAAGTAATTGAAAAAGgtaaacgtccaggagcttatAGAAATTGCGGACCTGCaagtgAATTAAGTAAAGTAAAAGTTATTGATATGACCGGACCTCAGCAGAGAGTTTTAAGTGGATATCACGCGTTAAGTGGCTTAAAAGCACCTCCGGGTATTGAGCGATTTGAGGATGTTGTACACAAGAAATGTACTAATTTTACGCTGCCAGAAATTCAACATAATTTAGATTTACTTGTCGATATGTGCGAGCAGGATATAATAAGGATAGACAGAAACACGAGGTACAATCAAGATCGATTAGTCGGATTAAAACAAGAAGAAGTCGGTTTGACAAATCTCATCGACCGAGAAGAGCATTTAATAGATAATTTAAATGACGTGTTGAGCATTGTTAATAAACTACTGGATCCTTTGCAAGGGTTGTCATTGGGACAAGTTGCAAGAATATTTAGAGATTTACAGGAAGATCATTGTGAAGAATATTGCCAGTATGAGTTGGGAGAGTTGGCACCTGGTCTTGTCGGTCCTCTGTTGACTTCTGCTTTAGCTAGTTGGTCACCTTTTAGTTTTCCTGCCCAATACACTGAAGTGTTTAGCCAGTGGAAGGACATTTTGGAGAAGCCTAAGCAACGTGGGACACTAGAAGGTAATAGTATGGGGATTCAGCCGTATGATAGTCTCTTATGGCACACTTGGGTGCCTGTTATCAGATCATGTGTTAGTTCTTGGAAGCCACGTGATTGCGAtcctttaataaatatcttgGAAACTTGGAAGCCACTACTGGCCCAGTGGGTATTGGACAATATCCTCGATCAATTGGTTATGCCAAAGTTGACGTCGGAAGTGGCAAAATGGGATCCTCTTACGGACACAGTACCGATACATACTTGGATACATCCGTGGATACCGCTTTTGGATGTTAGACTTCAGACCAGTATTTATCcaataatacaagaaaaattagGAGCAGCGTTGGCAAACTGGCATCCGTCCGACCGATCCGCAAAGTTAATGTTGAAACCTTGGCAACGGGCTTTACCGGAGGGGTCATTTGTTGCTTTCCTCGTTAAACACATCGTGCCCAAGTTACAACTGTGTATGCAATCACTCGTTATAAATCCTCATCAGCAGCACTTAGATGCTTGGCATTGGGTAATGGATTGGAGTGATATGTTATCTGTCggtaatttaactttaatattggACAAGTACTTTTTCCCACGATGGCTGCAAACACTTGCAATGTGGCTAAATCACAATCCTGATTATTCACAAGTCACCGAATGGTACTCAGGATGGAAACGGATGATGTCGGAGCAACTTTTGGCTCAACCTACGATTAAAGATAACTTTCACAAAGCACTGGAAATGATGAACAGAGCAGTATGTTCAGGTCAACAACCAGGTGCAAAGGAATCTGTGTCATACCTCACAAACATAGAAACGAATTTGCCACCGCCACCTCCACCACCAAGAATAGAGAGTATAGCTGAAGCAGTTCGATCTGCTAGTCAAATTCCACAAGGATTTAAAGACCTGGTTGCAAAACGTTGTGAAGAAAGAGGGATATTATTCGTGCCGATTCCAAATAAATATCACGAAGCGAAACAAGTATATAGGCTAGGAACAAACGGTGTCCAATGTTATATCGATCGTCACGTCGTTTTCTACACTCAAAACAATTCCACTTGGCTCCCGACGTCGTTGAATCGATTATTGGACATGGCTTAA
- Protein Sequence
- MSDDEMEKFEITDFDIENEFNINRPRRRLTKHQQIYGIWADDSDNETDNRSSFKAKKAPKNYTAPIGFVAGGVQQAGKKKEKDGAVKKEESDDSENDRPSTSFKVKNSSSESEEEILPRSGFGNQRSRQQATVTEITGDIAGLRNKRTASNNRLINQGVGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISAPVEAHLRKGRGAIGAYGPEKTPSIAIKKDEKNDVDNSDAETKWKKDDMNKKKTRYYYRSVDEVIEKGKRPGAYRNCGPASELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGIERFEDVVHKKCTNFTLPEIQHNLDLLVDMCEQDIIRIDRNTRYNQDRLVGLKQEEVGLTNLIDREEHLIDNLNDVLSIVNKLLDPLQGLSLGQVARIFRDLQEDHCEEYCQYELGELAPGLVGPLLTSALASWSPFSFPAQYTEVFSQWKDILEKPKQRGTLEGNSMGIQPYDSLLWHTWVPVIRSCVSSWKPRDCDPLINILETWKPLLAQWVLDNILDQLVMPKLTSEVAKWDPLTDTVPIHTWIHPWIPLLDVRLQTSIYPIIQEKLGAALANWHPSDRSAKLMLKPWQRALPEGSFVAFLVKHIVPKLQLCMQSLVINPHQQHLDAWHWVMDWSDMLSVGNLTLILDKYFFPRWLQTLAMWLNHNPDYSQVTEWYSGWKRMMSEQLLAQPTIKDNFHKALEMMNRAVCSGQQPGAKESVSYLTNIETNLPPPPPPPRIESIAEAVRSASQIPQGFKDLVAKRCEERGILFVPIPNKYHEAKQVYRLGTNGVQCYIDRHVVFYTQNNSTWLPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464857;
- 90% Identity
- -
- 80% Identity
- -