Basic Information

Insect: Gandaritis pyraliata
Gene Symbol: -
Assembly: GCA_947859175.1
Location: OX401854.1:2029130-2036441[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.049 2.8 8.8 3.5 1 23 198 221 198 221 0.91

2 29 0.00066 0.038 14.7 0.5 3 21 253 271 251 272 0.93

3 29 0.00021 0.012 16.2 0.3 2 23 308 330 308 330 0.97

4 29 0.00049 0.028 15.1 0.8 1 23 376 399 376 399 0.97

5 29 0.012 0.67 10.7 0.1 1 23 429 451 429 451 0.96

6 29 0.0017 0.096 13.4 1.9 2 23 498 519 497 519 0.96

7 29 0.00021 0.012 16.2 2.0 2 23 563 585 563 585 0.97

8 29 7.2e-05 0.0042 17.7 1.9 1 23 635 658 635 658 0.97

9 29 0.0003 0.017 15.7 0.1 1 23 713 735 713 735 0.97

10 29 0.0002 0.011 16.3 3.7 1 23 746 768 746 768 0.98

11 29 1.6 90 4.0 1.2 2 23 780 801 779 801 0.93

12 29 0.0045 0.26 12.0 0.9 1 23 811 833 811 833 0.98

13 29 0.00058 0.033 14.8 5.0 1 23 895 917 895 917 0.98

14 29 0.0025 0.14 12.9 1.3 1 23 925 947 925 947 0.96

15 29 9.1e-05 0.0053 17.4 0.1 2 23 967 989 966 989 0.97

16 29 0.045 2.6 8.9 2.1 1 23 1007 1029 1007 1029 0.97

17 29 0.19 11 6.9 0.5 2 23 1070 1092 1069 1092 0.90

18 29 0.0038 0.22 12.3 0.2 2 23 1115 1136 1114 1136 0.95

19 29 0.37 21 6.0 0.3 2 20 1140 1158 1139 1159 0.92

20 29 0.45 26 5.7 1.9 2 23 1179 1201 1178 1201 0.96

21 29 0.019 1.1 10.0 0.6 2 23 1217 1238 1216 1238 0.94

22 29 0.032 1.9 9.3 2.1 5 23 1248 1266 1246 1266 0.94

23 29 0.01 0.59 10.9 1.1 2 23 1277 1299 1276 1299 0.95

24 29 0.36 21 6.0 5.5 2 23 1316 1334 1316 1334 0.94

25 29 0.95 55 4.7 1.8 2 21 1338 1357 1337 1358 0.93

26 29 0.72 42 5.1 2.9 2 23 1406 1427 1405 1427 0.92

27 29 0.0019 0.11 13.2 0.6 2 23 1438 1460 1437 1460 0.97

28 29 0.32 19 6.2 3.0 2 21 1498 1517 1497 1518 0.95

29 29 0.83 48 4.9 0.4 1 17 1515 1535 1515 1536 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.049	2.8	8.8	3.5	1	23	198	221	198	221	0.91
2	29	0.00066	0.038	14.7	0.5	3	21	253	271	251	272	0.93
3	29	0.00021	0.012	16.2	0.3	2	23	308	330	308	330	0.97
4	29	0.00049	0.028	15.1	0.8	1	23	376	399	376	399	0.97
5	29	0.012	0.67	10.7	0.1	1	23	429	451	429	451	0.96
6	29	0.0017	0.096	13.4	1.9	2	23	498	519	497	519	0.96
7	29	0.00021	0.012	16.2	2.0	2	23	563	585	563	585	0.97
8	29	7.2e-05	0.0042	17.7	1.9	1	23	635	658	635	658	0.97
9	29	0.0003	0.017	15.7	0.1	1	23	713	735	713	735	0.97
10	29	0.0002	0.011	16.3	3.7	1	23	746	768	746	768	0.98
11	29	1.6	90	4.0	1.2	2	23	780	801	779	801	0.93
12	29	0.0045	0.26	12.0	0.9	1	23	811	833	811	833	0.98
13	29	0.00058	0.033	14.8	5.0	1	23	895	917	895	917	0.98
14	29	0.0025	0.14	12.9	1.3	1	23	925	947	925	947	0.96
15	29	9.1e-05	0.0053	17.4	0.1	2	23	967	989	966	989	0.97
16	29	0.045	2.6	8.9	2.1	1	23	1007	1029	1007	1029	0.97
17	29	0.19	11	6.9	0.5	2	23	1070	1092	1069	1092	0.90
18	29	0.0038	0.22	12.3	0.2	2	23	1115	1136	1114	1136	0.95
19	29	0.37	21	6.0	0.3	2	20	1140	1158	1139	1159	0.92
20	29	0.45	26	5.7	1.9	2	23	1179	1201	1178	1201	0.96
21	29	0.019	1.1	10.0	0.6	2	23	1217	1238	1216	1238	0.94
22	29	0.032	1.9	9.3	2.1	5	23	1248	1266	1246	1266	0.94
23	29	0.01	0.59	10.9	1.1	2	23	1277	1299	1276	1299	0.95
24	29	0.36	21	6.0	5.5	2	23	1316	1334	1316	1334	0.94
25	29	0.95	55	4.7	1.8	2	21	1338	1357	1337	1358	0.93
26	29	0.72	42	5.1	2.9	2	23	1406	1427	1405	1427	0.92
27	29	0.0019	0.11	13.2	0.6	2	23	1438	1460	1437	1460	0.97
28	29	0.32	19	6.2	3.0	2	21	1498	1517	1497	1518	0.95
29	29	0.83	48	4.9	0.4	1	17	1515	1535	1515	1536	0.88

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGCAGGCTATGTCTCAAACTGGGGGACTTTTACTCCATCTTCACGGCGGATAATGATGTCCAACTGTCTGAGATGGTTATGGAATGTTCCAAGATAAAGGTATATGATGGAGATGGCCTCCCTGATAAGGTGTGCGCGGAATGCATACAAAAGCTCAGCAGTGCCTACATATTCAAGCAGCAATGTGAGAGGTCAGACCAGGAACTGCGGCGGAACTATGTCCCGCCCCCTGGATTCAGTATCAGTCCACCACCACCAATAAACCGGCAAAGTAGTGATTCTGCCTTTTCAACTCAAACAGACAGCTCAAATCTAAAGTCTTTCTTCACGGAAAGCAAAATAACACCCGTCAGCAGGAACAGAAAGAGGAGCGTCGAAAGTGACAATGCTTCCGTCGGCAGTCGGTCTCAGGATAACAGTCGGCCCAGCAGCTCAAAGCGGGTGGAGGAGCTTAGAAAAACTCAGAGACCGAAACGGCCGCGCTACTCCGCTGACTCCGACTACGAAGACAACGGAGCTTCCAGCTTCATAAACGAAACAGATTCCGACGAGCCGCTCCTCAAAAACGAGCACTCCTGCCCGCACTGCCCGAAAACCTTCAAATGGCTGAAAAGCATGAAGATCCACATAGCCCACATCCACACGGGGAAAAAGGCGAACTCGCGACAAGAGGTCGTCGTCAATATTCCGATCAAAAGCATGGACCCGCCTGGCAGCGACGACGATCAGATGGACTGCGAGAAATGCGGCAAAAAGTTCAAACTAAAGATCATGCTGAAACGGCATCAAGAGTCGTGCCGAGCCAGCCGAGCGCCAGTTAAACCGCAACCGAAGTCGCCCATGAAGGAGCTGGTGATCACCTTGGAGCCGATAGACGCGGTGCCGCGCGCCAAAAAGCCCACGTGCGAGTACTGCACAGCGCAGTTTAAAACCGTCGAGAACTTGGAGAAGCACCTGAGAGTGGTACACGCAGCCACGCGCAAGAAATCGGAGAACGAACCTAGAGGCCCTCTGATATGCATCTACTGTGGCAAAGATTTCGGAGATTATTATGTATACAGCTCGCATTTCAACGGATGCCCGATGAAGGAGAACTTGCCTTCTTTCCAATGTCCCATGTGTCCCAAGGTGTGTAATCGTGCGAACGCTTACGTGAATCACGTGAAGAGTACTCACTACTTGGTGTCGGGTAGCAAAGTAGAGTTGCCTTCGCCGAGTACGAGCCAGGTGGTGTCGGGGGCGGGGGCGGGGGCGGTGCAGGCCTTCGAGTGCCGCATGTGCAGCAAGAAGCTGGCCACGCAGGCACTGCTGATCACTCACTTGGCCGCGCACATGTCTATTGACGATGACAATGCCACTCTTGACGATGATGATTTTGATTCGAGAGATGACAACGTAGCCGATGACTCTGTATCGGTCCAATCTGCTCAAAGCTCTCAAGCCTCGCAAGCCTCACAGTCGGGCCCCGTAAAATGTCGCTTCTGTGACAAAGAGTTCAAGTACAAAAAATCCCTTGCATCACACGAACTGAAACACACCGAAGAAAAAGTACCCATAAAAAACGAGCCCCCGGACAAACTCCCTGACACAGACTTGCTCGCTGAGACGCAGTTTGCTAAAGAATTCGATTCAGAATCTAGTCAAGACGAAGGAGAGGAGGACAACACGTGCGACATTTGCGAGAAGCAGTTCTCATACAAACGGCTGCTTATCCAACACAAGCGCACCAAGCATACAATGGTAGCTGGCATGAAGCGAGCAAAAATAAGCCTTAAAGACTGCTCGGTAAGGTGTCTGATCTGTGAGGAGGAGATGAAAGTGAGCGCGATAAATGAGCACAATCAGAAACATATTTCCGTGAATATTCGGCCCCGGAATATTTACACCTGTGCTGAGTGCTCGCAGAAGTTTAAAAGCTGCAGCAACCTAGCGAATCACATCAAACTGGTGCACAGGTTGAAGCAACTAGAGGTGCCGAAACAATTCGCTGGTGTGGATATGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCCCTGGACGAATCCCAGAGTCACAACGGCCATGGCGAGGTTCCGCTGAAAGCAGACGCCACGGTCAACCTGAGCGGGTTCACCTGCCCCATCTGCGGGAAGAAGATGCCGACGCTCGTGTCCCTCAAGCGGCACGTCAACTGGCACTCGTTCGTGGGGAACAATCTGGAGTCGAAGTACGAATGTTTCGTCTGTAAGGAGGCGTTCAAGTTCAAGGGCCACTTCAAGATCCACATGCGGCAACACTACAAGGACCCGAACCTGGACCCCGCCCTGCTGACGTGCTCCATCTGCCAGCGCAAGAGCAAGCACCTGCGGGCCGCGCAGGCGCACTCCAACTGGCACAAGCAGACGCGCTTCCAGACCAAGGACTACCAGTGCTCCATCTGCAAGCGAGTGTTCCAGTACCGCCGCGTCTACCTCTCGCACATGGCCATCCACTACAAGAAGGGCGAGAGCGGACAGAACACGATCGTCGGCAACATGGCCGACAGCAACCTCGACAAGACCAATTTCGACGGCACCTTCTGCTGCCAACTGTGCGGCAAGATCTGCGACTCGGAGAACTCGCTCAAGTGCCACACCAGCTGGCACAAGTCCAAGACGCTGTTGTACGGCGCGCGCCACGAGTGCCAGATGTGCGACCTGCAGTTCACCAACAAGCGGCATCTCGAGCTGCACACGCGCTCTCACTACGAGGACCCCGACGGCGAGTTCAAGTGCACCATCTGCGGGAAGGGGTTCATCGACGAGGAGTACCACCGCCGGCACGTCAAGGGGCACAACTTCGACCACCAGTCGCACAAGAAGAGGCTCGAAAACCTTAGAAAGAGCAAGGTCAAGTGTCCGATCTGCGGTCGCTACTACCCGGACCTCGTGAAGCTGATCCGCCACCTGCGGCGCACGCACCCCGAGAGCAAGATGATAAAGGAGGACCCCGACGCCCCGCCGCAGAAGTACTACTCGTGCAAGCTCTGCGCCAAGTCCTTCTACGACGAGAAGCGGTTCAAGAGCCACGAGGAGTCGCATCTCCGCAAGCCGAGCTTCTTCAAGTGCAAGTTCTGCGGCCACAAGACGATTTCCATGAAGGGCCACCACATCCACATCAAGACGAAGCACATGACCAAGAAGTACGTGGACAACCCCCTGAAGTGTCCGCGGTGCGACGAGGTGTTCGTGTGGGGCTACGCGCTGCACCACCACCTGCGCGACGTACACGACATCGTGGAGGACTGGATCGCGGAGCGCACCGAGGCCACGCTGGAGGGTCCGCTCAAGGACCTGCAGTGCTCCGTCTGCCTCAAGGTGCTCGCCAGCAAGGGCAACTTCGAGCGACACATCGACTACCACAACACACTGCGCTGCAACTACTGCTTCGAGTACTTCAGCACGCTGCGCTTCCTTGAGGGTCACCTTGCCTTCAGCTGCGACAAGAAGACGCTCATCGGCGACGCGGACCCGCACCCGAAGCGCGTCAAGTGCGAGCTCTGCTACAAGGCGTTCAGCTTGCAAGTGAAGCTCGACTGCCATCTGCGTACCCAGCACAGCATCAAGGTGAACCGGGAGCGGCTCGCCGGGAAGCAGGAGCTGGTCTGCGACTACTGCTTCAAGGTGTTCGAGAACGAGCACGCTCTCAGCGGGCACAAGATCTACCACCGAACCATCGGCTACTTCGGCTGCATCTACTGTCCCAGGAAGTTCAACACTCAGACCGCGTTTCGGAAGCACAAGAACAATCACATGTACGTCCATAACGTGGATAACCCGACCAAGTGCGAGCATTGCGACGAAACCTTCGTGCTGTTCAAGGAGATGATTTACCACATGCGCGACGTGCACGGCGACGACAAGGAGTGGATCGTGATGCCGAAGGACTCGATCGAGGAGACGTGCCCGATCTGTCACAAGACTTTCTTCAACCTGCACCGCCACATGGACTATCACGAGGAAAACAAGTGCAAGAAATGCAACGAGTACTTCTTCTCGAGCGTGGACTACGATAACCATCTCTGCGCAATCGAGAGCGACAACGAGGAAGTGGCGGGCGTGGTCAGCCACGGAATGCCATACGAGGAGTGCACCTTCTGCTTCAAGCCGATCACCAAGAAGGATTCCAAGAAAAAGCACGACATTCTACATCGCACCTCGGGAGCGATCTCGTGCCGCTTCTGCCATCTCAAGTTTAAAACCCTTGAGGCGTTCAATATCCACTCGTTTTCTCATCGCAGCAGGAAATACAACAAGAAGCCGATTAAATGCCGCGTGTGCAAGGAGCGCTTCGTCAAGTACGGTCCGTTCATAAAGCACATGAGAACTGTGCACAAAACCGCTAAGAAGACCCACTACCGCGCGCTCGTCAAACCGGAGCGCTGTGTCATCTGCGGCGGAGAGTTCCCCAACCTGCACAACCATTACCGCGCACACTTGGCGAACCAATGCCAGTTCTGCCTCAAGTACTTCACCTCCTCGAAACTCTTCGCAAAACACCAGTGCGACAAAGTCGACGAGGATTGTTCCAAAGTCTTCACTTCGGATGAAAACTTGATGGCGTTGATCAACTCGTACATTCCTCGAGACTTGAAGGACGATGAGAAGTTCTACGGTTACACCGACGATGATGAAGAGGTCGAGACGGCACTGCCGGTAGAGATGACGCTGGCGTACGATAAGAAGGTTATGAACGGTCCGTCGAAGGTTCGGAAGCCGGTGATAGACAGCCAAGAGGCTGAGATTGAGAGGAACTTGCACCTGATGGTTCAGTCGCCGATAATATCCGATGTGCTATCGCTTTTCCAAACAGAACAGGAGACTCAAGACAGCAAGCTTGAGGAAATGGGAGATGTCGTCGATCTGTCGGATGATTCGATGGACATGAACGATATCGAAGCGCCCATTGTTATAATTGATGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTADNDVQLSEMVMECSKIKVYDGDGLPDKVCAECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPPINRQSSDSAFSTQTDSSNLKSFFTESKITPVSRNRKRSVESDNASVGSRSQDNSRPSSSKRVEELRKTQRPKRPRYSADSDYEDNGASSFINETDSDEPLLKNEHSCPHCPKTFKWLKSMKIHIAHIHTGKKANSRQEVVVNIPIKSMDPPGSDDDQMDCEKCGKKFKLKIMLKRHQESCRASRAPVKPQPKSPMKELVITLEPIDAVPRAKKPTCEYCTAQFKTVENLEKHLRVVHAATRKKSENEPRGPLICIYCGKDFGDYYVYSSHFNGCPMKENLPSFQCPMCPKVCNRANAYVNHVKSTHYLVSGSKVELPSPSTSQVVSGAGAGAVQAFECRMCSKKLATQALLITHLAAHMSIDDDNATLDDDDFDSRDDNVADDSVSVQSAQSSQASQASQSGPVKCRFCDKEFKYKKSLASHELKHTEEKVPIKNEPPDKLPDTDLLAETQFAKEFDSESSQDEGEEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICEEEMKVSAINEHNQKHISVNIRPRNIYTCAECSQKFKSCSNLANHIKLVHRLKQLEVPKQFAGVDMADFCEVVVTKAEPLDESQSHNGHGEVPLKADATVNLSGFTCPICGKKMPTLVSLKRHVNWHSFVGNNLESKYECFVCKEAFKFKGHFKIHMRQHYKDPNLDPALLTCSICQRKSKHLRAAQAHSNWHKQTRFQTKDYQCSICKRVFQYRRVYLSHMAIHYKKGESGQNTIVGNMADSNLDKTNFDGTFCCQLCGKICDSENSLKCHTSWHKSKTLLYGARHECQMCDLQFTNKRHLELHTRSHYEDPDGEFKCTICGKGFIDEEYHRRHVKGHNFDHQSHKKRLENLRKSKVKCPICGRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPQKYYSCKLCAKSFYDEKRFKSHEESHLRKPSFFKCKFCGHKTISMKGHHIHIKTKHMTKKYVDNPLKCPRCDEVFVWGYALHHHLRDVHDIVEDWIAERTEATLEGPLKDLQCSVCLKVLASKGNFERHIDYHNTLRCNYCFEYFSTLRFLEGHLAFSCDKKTLIGDADPHPKRVKCELCYKAFSLQVKLDCHLRTQHSIKVNRERLAGKQELVCDYCFKVFENEHALSGHKIYHRTIGYFGCIYCPRKFNTQTAFRKHKNNHMYVHNVDNPTKCEHCDETFVLFKEMIYHMRDVHGDDKEWIVMPKDSIEETCPICHKTFFNLHRHMDYHEENKCKKCNEYFFSSVDYDNHLCAIESDNEEVAGVVSHGMPYEECTFCFKPITKKDSKKKHDILHRTSGAISCRFCHLKFKTLEAFNIHSFSHRSRKYNKKPIKCRVCKERFVKYGPFIKHMRTVHKTAKKTHYRALVKPERCVICGGEFPNLHNHYRAHLANQCQFCLKYFTSSKLFAKHQCDKVDEDCSKVFTSDENLMALINSYIPRDLKDDEKFYGYTDDDEEVETALPVEMTLAYDKKVMNGPSKVRKPVIDSQEAEIERNLHLMVQSPIISDVLSLFQTEQETQDSKLEEMGDVVDLSDDSMDMNDIEAPIVIIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170802;
90% Identity: iTF_01219988; iTF_00638874; iTF_00686587; iTF_00632991;
80% Identity: -