Gpyr010735.1
Basic Information
- Insect
- Gandaritis pyraliata
- Gene Symbol
- -
- Assembly
- GCA_947859175.1
- Location
- OX401864.1:7055422-7057278[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-11 3.5e-08 33.2 0.0 3 37 17 51 15 56 0.94
Sequence Information
- Coding Sequence
- ATGGTACGTACTTATAAAAAGAAGACATCGAGAGGCAGTTGGTCTGTAGAAAGCATGAAACACGCAATTGATGCAGTTTTAAGCAAAACAGCAGGTTTCAGAAAAGCAGCTCAATTGCACGGTGTTCCACAGACCACATTGGAGCGTCACGTCGCAAAAATAAAGAAGGGCGAGGTATCTCTTAATTCAGCTCCAGGTAACTTTAAGCccgtattttccaaacaagaagaagaggagcttgttaggtatgtaaaagatatggagaaacgattatttggattgacaactgtcgtcctacgaaaactagcctatcagctcgcagaaaaaaatgctaagactcacaattttaaccatgttaaaaagattgctggcatagattggttaaaaggcttcatgaaacgtcacccggatttatcaattcggaaaccagaagccacatcggcagcgcgagctatggggtttaacaaagtggccgtgaataagttttattccttgcttggggaagtatacgacaaatataatttaacgccagatagaatatacaactgcgacgagactggaatatcatgcgtctccaaaacaaagagcaaaatcattgctgaaaaaggacgaaaacaagtaggctccctttcgtctgcggaacgagggcagacagttaccgtcgagatatgtttcaatgcagccggaacgtatatgcctcctatgctaatatttcctcgacagagaatgaagcaggagttgttggatcgagctcctccagggacaacggcagaatgcaacgctcgaggctggatgacaactgaaaccttcatgagctggttccaacggttcgttaaattttctggggcctcaataactaacccggtcttgttacttctagatgggcacgtaacgcatacgcaaaatatagagattattgaatgtgcacgtaagaatggtgttgtaatgctttgctttcccccccattgcacccacagactccaacccttggatgttggcttcatgaaaccattgagtgtgtattatgatcatgcttgttctaactggttacggtcgcacccagggcgaataataacaacttttcaaataagcgaaatttttgcagatgcttatattcaagctgcaacaatggccacggcaattaatgctttcagaaaatgtgggatatggccatttaaccaaaataatttcacagattcagatttTTTAGCTGCATCAACAACAGACATACCGTTAACAAATGAAGAGCCTGAAACCGCTGCTTCAACTGCTGAAATTCAGCAACCGCCTCCCTTTGAAGAGATACCTCGTGAACCTGTTTTACCTGCAATATCGACACATTTACATCAGGAGACTCCTATCTCAGAGCCTCAGCCTGGACCATCTATGCAAAACGAAAATAACGTTTCCGGATCTCCAATTCGAAGAGTATGTCGTGATCTAACAACTTTCTTTGAAAACGCTTCTCCCAAAGACATTCTCCCCATCCCCACAGTCGAACAAAGAAACCAAGCGAGAAAAaattatcgcagagggaaaacggttgttctcacttcaaccccctacaaaaacgaactagaagaacgcgaacaacttaaacgaacgaagaagtgttcaaatccgaatgatccccgattgaaaaaaaactcaaaaaaacagaagactcggacagatggagaaaatattaaggacgatgtcttatgcatctactgtgttgactcgaaccacacttatttgaagtcttcggagcgttgggtggcctgccagctatgtggacagtgggcccataccgcctgtgcaggagttgatgacgcagatttagaagaaatccatatctgcttattctgtgacaaataa
- Protein Sequence
- MVRTYKKKTSRGSWSVESMKHAIDAVLSKTAGFRKAAQLHGVPQTTLERHVAKIKKGEVSLNSAPGNFKPVFSKQEEEELVRYVKDMEKRLFGLTTVVLRKLAYQLAEKNAKTHNFNHVKKIAGIDWLKGFMKRHPDLSIRKPEATSAARAMGFNKVAVNKFYSLLGEVYDKYNLTPDRIYNCDETGISCVSKTKSKIIAEKGRKQVGSLSSAERGQTVTVEICFNAAGTYMPPMLIFPRQRMKQELLDRAPPGTTAECNARGWMTTETFMSWFQRFVKFSGASITNPVLLLLDGHVTHTQNIEIIECARKNGVVMLCFPPHCTHRLQPLDVGFMKPLSVYYDHACSNWLRSHPGRIITTFQISEIFADAYIQAATMATAINAFRKCGIWPFNQNNFTDSDFLAASTTDIPLTNEEPETAASTAEIQQPPPFEEIPREPVLPAISTHLHQETPISEPQPGPSMQNENNVSGSPIRRVCRDLTTFFENASPKDILPIPTVEQRNQARKNYRRGKTVVLTSTPYKNELEEREQLKRTKKCSNPNDPRLKKNSKKQKTRTDGENIKDDVLCIYCVDSNHTYLKSSERWVACQLCGQWAHTACAGVDDADLEEIHICLFCDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00408365;
- 90% Identity
- iTF_00737411; iTF_00666440; iTF_01264387; iTF_01264385; iTF_01264388; iTF_01264384; iTF_00352982; iTF_01161263;
- 80% Identity
- iTF_00737411;