Basic Information

Insect: Cydalima perspectalis
Gene Symbol: -
Assembly: GCA_951394215.1
Location: OX596226.1:6077219-6079063[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.5e-10 9.7e-08 32.1 0.1 3 37 17 51 16 60 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.5e-10	9.7e-08	32.1	0.1	3	37	17	51	16	60	0.95

Sequence Information

Coding Sequence: ATGGTACGAACGTATAAGAAGAAAAGTTCGAGGCGTAGTTGGTGCATGGAAAACATGAAACAGGCAATTGATGCAGTCTTAAGTAAAACTGCTGGCTATAGAAAAGCTGCTCAACTGTACAGTGTACCACAGACCACATTAGAGCGTCACGTCGCTAAAATAAGGAAAGGCGAACTTTCACTAGACTCTACTCCAGGTAACTTCAAGCCCGTGTTTTCCAAACAAGAAGAAGATGAGCTGGTAAGGTACATTAAAGAAATGGAGAAACGTTTGTTTGGTTTAACTACTGTTGTCCTACGGAAACTAGCTTATCAGTTAGCGGAAAAAAATGGCAAAGCTCACAATTTTAATCATGATAAAAAGATAGCTGGCTTAGATTGGTTAAAGGGCTTCTTGAAGCGCCACCCAGATTTATCTATCCGAAAACCGGAAGCTACATCGGCAGCTCGAGCAATGGGCTTTAATAAAGTGGCAGTAGGtaaattttattctttgctCGGAGAAATATatgacaaatataatttgacgCCAGACAGAATTTTCAATTGCGACGAGACTGGCATATCATGCGTCTCAAAAACGAAGAGCAAAATTATTGCAGAAAAAGGGCGAAAACAGGTAGGATCGCTTTCTTCAGCAGAACGAGGGCAGACTGTTACGgttgaaatatgttttaatgcAGCAGGAACTTACATGCCTCCTACGCTAATATTTCCTCGACAGAGAATGAAGCAAGAGTTGCTGGATCGAGCTCCTCCAGGAACAGTAGCAGAATGCAACCTTAAAGGCTGGATGACTACTGAAATATTTGTGAGCTGGTTCCAACGGTTTGTCAAGTTTTCTTGTGCATCAATAACTAACCCGGTCTTGCTTCTTTTAGATGGTCATGTAACACATACGCAAAACATATCTGTAATTGAATACGCACGCAAAAATGGCGTTGTAATGCTTTGCTTTCCTCCGCACTGCACCCATAGGCTTCAACCCTTAGACGTTGCCTTTATGAAACCTTTAAGTGTATATTATGACCACGCCTGCTCTAATTGGTTAAGGTCTCACCCGGGGCgaataataacaacatttcaAATAAGCGAAATATTTGCAAATGCATATATTCAAGCTGCAACAATGTCTACAGCAATCAATGCCTTCCAAAAATGTGGCATATGGCCTTTCAATCAAAATAACTTTACAGATTCAGATTTTTTAGCTGCCTCAACCACAGACGTTCCGCTAGCAAACAATGAGCCTGAAACAGGTCCTGTAAATGCTGGAATCCAGCAACAACTGCCACCTATCCTTGAAGACCATTCACTGGAAGCAGATTTGCCTGCATCAGCTACACCTCAGCCTCAGCCTGGATCATCAACACAACATAGCCTAATCCAATCTCCGATTCGAAAAGTATGTCGTGATTTGACAACTGCGTTTGAAAATGCTTTGCCTCAAGAAATTCTCGTGATTCCGACAGTCGAACAAAGAAATCAAACGAGAAAAAACTATCGCCGAGGGAAAACTGTTGTTCTTACTTCAACCCCCTACAAAATTGAGCTAGAAGAGCGGGAACAACTTAAGAAAACGAAGAAATGTTCTAATCCAAATGACCCCAGGTTAAAGAAGAACTCTAAGAAACAGAAGACCCAAAAAGCTCCCTCTGATGTAGAAAATGCCGATGAGGATGCCCTATGCCTATACTGCCATGACGTGAACCACACTTATTTAAAGTCTTCGGAACGTTGGGTGGCTTGCCAACTATGTGGACGGTGGGCTCATACAGCATGTGCTGGTGTAGACGACGAGAATATAGAAGAAATCCACATCTGCTTGTACTGTGAcgcaaaataa
Protein Sequence: MVRTYKKKSSRRSWCMENMKQAIDAVLSKTAGYRKAAQLYSVPQTTLERHVAKIRKGELSLDSTPGNFKPVFSKQEEDELVRYIKEMEKRLFGLTTVVLRKLAYQLAEKNGKAHNFNHDKKIAGLDWLKGFLKRHPDLSIRKPEATSAARAMGFNKVAVGKFYSLLGEIYDKYNLTPDRIFNCDETGISCVSKTKSKIIAEKGRKQVGSLSSAERGQTVTVEICFNAAGTYMPPTLIFPRQRMKQELLDRAPPGTVAECNLKGWMTTEIFVSWFQRFVKFSCASITNPVLLLLDGHVTHTQNISVIEYARKNGVVMLCFPPHCTHRLQPLDVAFMKPLSVYYDHACSNWLRSHPGRIITTFQISEIFANAYIQAATMSTAINAFQKCGIWPFNQNNFTDSDFLAASTTDVPLANNEPETGPVNAGIQQQLPPILEDHSLEADLPASATPQPQPGSSTQHSLIQSPIRKVCRDLTTAFENALPQEILVIPTVEQRNQTRKNYRRGKTVVLTSTPYKIELEEREQLKKTKKCSNPNDPRLKKNSKKQKTQKAPSDVENADEDALCLYCHDVNHTYLKSSERWVACQLCGRWAHTACAGVDDENIEEIHICLYCDAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00408364; iTF_00238753; iTF_01158721; iTF_00238754; iTF_00238755; iTF_00213368; iTF_00238751; iTF_00238752; iTF_00726256; iTF_00213363; iTF_00238750; iTF_01431777; iTF_01431778; iTF_01431779; iTF_01431780; iTF_01431781; iTF_01431793; iTF_01430709; iTF_01430710; iTF_01091673; iTF_01091674; iTF_01430746; iTF_01431776; iTF_01264388; iTF_01264385; iTF_01264387; iTF_01342930; iTF_01430706; iTF_01430707; iTF_00206934; iTF_00206933; iTF_00637498; iTF_01264384; iTF_01333698; iTF_00710951; iTF_01161263; iTF_01333713; iTF_01338613; iTF_00352982; iTF_00737410; iTF_00737411; iTF_00666440; iTF_01251673; iTF_00408363; iTF_00771829; iTF_00636266; iTF_01375693; iTF_01158676; iTF_01158677; iTF_01158678; iTF_01158679; iTF_00874390; iTF_01375701; iTF_00876089; iTF_00120425; iTF_00875243; iTF_01375700; iTF_01538678; iTF_00888187; iTF_01375739; iTF_01375712; iTF_01339991; iTF_01339992; iTF_01339993; iTF_01339994; iTF_01339995; iTF_01339996; iTF_01491836; iTF_00042557; iTF_00042556; iTF_01140863;
90% Identity: iTF_00636266;
80% Identity: -