Gmel004435.1
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_958496185.1
- Location
- OY292286.1:2312700-2328418[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.28 7e+03 -3.6 0.3 51 65 39 53 23 82 0.44 2 3 6.7e-76 1.6e-71 241.5 22.3 1 270 134 404 134 423 0.86 3 3 0.017 4.2e+02 0.4 14.3 1 83 424 509 424 555 0.64
Sequence Information
- Coding Sequence
- ATGGGCAATCTATCCAAATTGGCAACGCCTGACAACAGTGGCGATGAGAGCGGAGATGCTTTCACAGATGGGGACTTTGATAACTCGGACGAAGAGACTGTCGTTGAACGGGATGAgcaacacagtcatacaaataTGACCGTCAATGAGGCTGTAAATATTGAAACTAAGAAGATGAATGTAGAAACTGTCAGTGAATCAGATACTAATAACCCAAAAGATAAATGTACTGGTGAGATCAAATCGAAAATTAATGGACATAAAATATGTGATGTTGGACAATCTAGTGACGTAGATAATAACGTTAATGGCAATTATGGAATGTCTGACGTGCGTCGCGATTCACACGAGGAGCAAAATCCATCAATTGTTGGAATCTTGGGTGGACAGCAAAATCATgcTGAGCAGCGGctggcggcgcggcgggcggcccGCGCGGAGGCGCGCGAGATACGTATGCGCGAGCTCGAGAGGCAGCAGCGCGAGCAAGAGGACCATGCCGACAAAGCGTATGACATGTATGCAGAGACGGTGGGTCGCCGCGGCGGCACCCGGCTGGCGGCCCTCAGTCCGTCGGTACACTCGCCCCGGCGGAGCTCCGAGGACTCCGCCGACGACACGTTTAGTATCAAGGACCTTAGACACGAGTTGAAAGAAGTGCAGGAGAAATTCCGCAAGGCGATGATCCTGAACGCGCAGTTGGACAACGACAAAGCGGCGCTCGGCTACCAGCTCGAGCTGCTCAAGGACCGGATAGAGGAGCTACACGAGGAGTACGCACAATTGCAGCGGGAACACAAAGAGAAGTGTTCGGCGCACGAGCGCTTAAAGCGCGAGCACGCGTCGCTGGAGCGCGAGGTGGCGGCGGCGCGGGACGCGGTGCGCGCGCGggacgccgccgccgccgccgccggctaCGCCTTCGTGGACGCCGCCACGCTGCCCGCCGCGCCGGCCTCGCCCtccgccgccgctgccgccgccgcgccggccTTCGGCGCCGTGCCGCCGCTCGCGCTCGTCTCGCACCAGTCCGAGCAGCTGCTCAACGACGCGGGAGAAGGCACCCTCGATGTGCGATTGCAAAAGCTGCTCGCGGGCAAGCAGTCGCTAGAGTCGGAAGTACGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGTGCCGCCAGGCAGAACGGTGTCGCCAACCATCACGACCAGGAGTACGAGAATGAACTGGAGGCGGTGCGGCGCAGCGCTGCGGAGGCGaaggcgcgggcggcgcgcgcggAGGCGGAGGCGGCGCTGCAggcggccgccgccgcgcgcctcGACGCGCAGCTGGCCCGCCTGCGCGCGCGCCAGGACCACCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGCGAGGTCACCACGCGCACTCCACACGCGCACACggacacacacacgcgcacgcacgcggacacgcacacgcacatgcacaagGACACAGTCACTACAACAGACACTCACACGTACATGCACAAGGACACGGATACGCGCACAGACACGACAACGGACACTCACACGTACATGTACACggacacgcgcacgcacaccaATACGCACACGACAACtgacacgcacacgcacaaggACACGGATACGCACCTGCACCACCACACCAGACGAAGACTTGCGATAATGATCTGA
- Protein Sequence
- MGNLSKLATPDNSGDESGDAFTDGDFDNSDEETVVERDEQHSHTNMTVNEAVNIETKKMNVETVSESDTNNPKDKCTGEIKSKINGHKICDVGQSSDVDNNVNGNYGMSDVRRDSHEEQNPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPSVHSPRRSSEDSADDTFSIKDLRHELKEVQEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHKEKCSAHERLKREHASLEREVAAARDAVRARDAAAAAAGYAFVDAATLPAAPASPSAAAAAAAPAFGAVPPLALVSHQSEQLLNDAGEGTLDVRLQKLLAGKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYENELEAVRRSAAEAKARAARAEAEAALQAAAAARLDAQLARLRARQDHQDEHEEQLKQERRRLQREVTTRTPHAHTDTHTRTHADTHTHMHKDTVTTTDTHTYMHKDTDTRTDTTTDTHTYMYTDTRTHTNTHTTTDTHTHKDTDTHLHHHTRRRLAIMI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00008032;
- 90% Identity
- -
- 80% Identity
- -