Gnym006727.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- Trerf1_1
- Assembly
- GCA_963978555.1
- Location
- OZ021704.1:42519127-42546691[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-08 2.6e-05 25.4 0.2 2 46 1098 1142 1097 1142 0.96
Sequence Information
- Coding Sequence
- atgttatatttttttgcagTGTCGACAACTACATCTGATGATAAGAAATCTCCAAGTACGGAATTGGTTAAGGTTTCCACAAAACGTGCCAGACCTAAACCCACATCGCCAAATAGACAGGGTCCTCAGCAATGTCAGGTCTGTGCCAAAGTATTCGGAAACGCCTCTGCCTTGGCAAAACACAAACTGACTCATAGCGACGAAAGAAAATATGTTTGTAGCATGTGTGGAAAAGCTTTCAAGCGACAAGACCACCTAAACGGTCACATGCTAACCCATCGCAATAAGAAGCCCTATGAGTGTAAAGCAGAAGGTTGCGGCAAGAGTTACTGCGACGCGAGATCCTTACGAAGACATACTGAAAATCACCATAGCTCTCCCGTCACAACGGTGAACACAACAACTACAACATTATCACCCGCCCAAGGTGCTGCTTCAGGAGATGCTGCCTCGCCACACGGTTCCAGTTGCATACAGTATGCACCGCCTCCGACGTCGATTACCGCTTCGACTACGACGTCGATTACTGCTTCCAACGGAAAGAGTCAGTTGCAGCAGCTGTTGGCTACAGATTCAACAAAAGGCAGCAACAGTTCCAACAATGACGGTTTAACTAAACAGCAGCTGGATTTGATACATCAAATAATGGAACAAACTCAGCGACAATCCCAGGCTGTAGCAGCGGCAGCGGCATCAAACAAATCCCCTACGTCAAAAACTTCCTCCAGTGGCGGCGGCAGTATCAAAAGCAGCAGCAAATCCACGTCGAAATCGCATCAGAGCAAAAACACATGGTTGCCAACGGCAAGTCAACAACAGCAGACAAGTAAAAGCAGCAGTACTAGTAGCAGCACCTCCACAAGCGGAACTTCGAGTCCGCAGTCTAAAGTTACGACCACGTCAACGCCCACATCGCCAGTAAATTCTACAACTGGCAAAACCGAACCAAAACCAGTGGAGTGCAACTTGTGTCATCGAAAGTTCAAAAATATACCGGCCCTCAATGGTCACATGAGACTTCATGGAGGGTATTTCAAAAAGgacaatgaaaacaaaaaaaacgaaAAGAAAGATCCGGGTGGTCCTCCATTACAAACGGCCAGTTTCAGCGTTCGAGCTCTTATAGAagaaaaaatcatcaacaagAGGATAACGAACACACCTCAACCATCTAATGAAGACCAAAAGTCTAACGCTCCACCTCTATTTCCTTTAAACGTGCATTCCTCTCCATCTAACACCGATCTAGAATCGAAAATTTCTTCTTTCGTTGTACCAGCACCTCCACAACAGACCTCCGAGAAATCCCGTAGACATTCCGATGCGGACGCATTCCGTAGCAGTACCACACAGCAGGAGGCTCAAGCGTTAGCCGATCTCATTCTCAAACGCGAAAAAGCTACAGTGAAAAGAGCTACCTCGGATCCAGGTCAATCCTCGCCAATACTACAATTCCAAACGAATGATTCCTTCACTTTGGCCAACGTTACTTACCAATCCGAGGAAGCAGAATTTATATCTTCAAGTTTGCAAGAAGGGGTGTTCACTCAAGTACAAGACAGTATGCTTCTACAAGGTGTAGATCCCAATCAACTAGCATCGATTCAATTTCAAGCTGAATCTCTTCTGCAAGATCAAAACGAGCAGCAAATCCAAGAATTTaaaattgaagatataaatCTTCAGGAAACTGTAGTTCAACAATCGCCTTCGTATCAGTCTAATCACTCGGTCAATCAGGAATTGCAAGCGGTACTTGATTCGCCCTTACCGGAAAGTTTGGCTGAATTCAGCACTTTTCATTCGACAAACAGTATCGACATGCCTTCTCCAAGCTACCAAACTCAATCGCCTGCACAATATGCTCGGTCGCCGCACACGATTACCGCACAATCTCCACTGCAAAGTCCGTTAATAAGGCACGACTCTCCCGGATTTGCATATCCTACGCCACCTGCAAGTCATGAAGGTCAAAGTCCAGGGTTCGGACAAAATACAATGCTGCCTATGGTATCTCCCAATGCTCAAGAATATGGACAGATTGTCGAAAGAGGTGTTTACGAAGAACCACCACAAGCGTCTTCACCGTTATCTGCAGCCTTTTTCACTTCAACAATGTCTAGTTCGGCAGCAGTAGAAGAAGCGTTAGAGGAAGTACTGCCAGGAGAACCTCTTTATCCTCTAACAAACTCACCTTCTCCTCAATCTCCTCTCGGTCTTACTCCGGTACCGTCACCGATATCTAACATAGTAAGCACTTCGGATCCGCAGCCTTCTACAACATTCTCACCGTCTCCGAATACTTCTACATTTTCCATGTCCGGCAATTGGTGCAACGCAGTGATGCTACCAAACTCGGATGATCCCTTACTATCCAGCAGTCCCAAAGATTTTGTCCCGAGGAGAAAACTCGAAATCAACGGAGTGCCATTGAGACTTATAAGCAACAACGGCCTAATTGAATTGAACAGCTCGAATTTTGCCGGAATACTCGTCGATGCCAACGGAGAGATCAAACTCTTTCAAACTGGCGGTAGTACCTttcaaactaaaaatattttgttgacgAATACTCCTTTGATTACTCATGATATCGACGACAAATGTAAAAAAGTGATAAAAACCGTACAATGCACAATTCCAACGAAGCACGTTATTAACAGGCCTAAgcaaattaatgaaattaagAAAGAAGACAACAACGATGTTTTTTTAAGTCCTACTTCgaTACCTGCTAGTCCGGTAAGAATATCTAGAAAAAGGCCTAGAATGGAACCCCTTCAATTACCTGTATTGCATCAATCGAAACTTAGAGCTACAAGAAGTAAACCTCCAGGATGTGCTAGATATACTCCTCAGCCAATCTTGAGCCCACAAAGACCAGGAACGGGACTTTACACAAATATTAAACACAGAAGTGAGGATGGTATAAACTGGACCAGTGATCCCATTCCAGAAAGTGATTCCACCCCTCACGTTAACGTCGGATCTCAGTTCCAATGTAAAATACCGAACTTTTCATCGGCGCCTAATAGAGGCAGCTCGGAACCAACGTATGAAGATCTTTTATGGGATCCTGGTATAAGTAATTGTACAGATAGCGAAGtgGATATGTACCTGGATTTCGCTTGCTGCGCTGCTGTTCCAGGCGGTGGAAGAAATAAAGAATATGCGATGCATCTTCTTCATATGTGTGGGGGAAACATACATGACGCAATGTTGAGGTTGATGCAACCCTCTCCGAATCTTCCTGCCGATCATCCTCTCTTAGCGTATCAGTATTGCGAAAGTGACAAATGGTCAACGACAGAAACTGACATCTTCCACAAGTCACTGCTCAAGTACGATAAGGATTTCCGCAATATTGCACAAGAGattCGAACGAAAACTGTTAAGCAGTGTGTGCAATTTTATTACGTTTGGAAAAAAGTATGCGCCGATGAGTATAGGAGATTGAAACATCTCAGAGAGAGGAGGAATTATTACTACAAACACGCAGAAATGGATATAGATGAAAAGCTGTTTGCCGATGTCAAGCTACTGGGGATTGCAGATAGTGGTTGTCCGATACCCATACCTGATACAAGAAACTTTGTGTGCGAGTTCCCCGATTGTTCAGCGAGTTTCAATTCTCGAGCAGCATTAAACGGTCACATTCGAATACACGGCGGTACCGCAAGAAACTCGCCGACTCCGTCATCGACAACGTCAGAAAGGCGAACAGCATCTGTCACTTCTTCGAGCATGTGTCACCCGGACTCGACCGAAGAGTACCCCTGTAAGATATGCGGGAAAGTGTTCACAAAAATCAAAAGTCGTAGTGCCCATATGAAGTCCCATCGACCCCCCGACGCTGAACCGgtcaaaagaaaagaaaaagatacCCCCAGCTACGAACTTTCCGTGCCAAGCCCGTTTAGTACTTAG
- Protein Sequence
- MLYFFAVSTTTSDDKKSPSTELVKVSTKRARPKPTSPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSPVTTVNTTTTTLSPAQGAASGDAASPHGSSCIQYAPPPTSITASTTTSITASNGKSQLQQLLATDSTKGSNSSNNDGLTKQQLDLIHQIMEQTQRQSQAVAAAAASNKSPTSKTSSSGGGSIKSSSKSTSKSHQSKNTWLPTASQQQQTSKSSSTSSSTSTSGTSSPQSKVTTTSTPTSPVNSTTGKTEPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDNENKKNEKKDPGGPPLQTASFSVRALIEEKIINKRITNTPQPSNEDQKSNAPPLFPLNVHSSPSNTDLESKISSFVVPAPPQQTSEKSRRHSDADAFRSSTTQQEAQALADLILKREKATVKRATSDPGQSSPILQFQTNDSFTLANVTYQSEEAEFISSSLQEGVFTQVQDSMLLQGVDPNQLASIQFQAESLLQDQNEQQIQEFKIEDINLQETVVQQSPSYQSNHSVNQELQAVLDSPLPESLAEFSTFHSTNSIDMPSPSYQTQSPAQYARSPHTITAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPGFGQNTMLPMVSPNAQEYGQIVERGVYEEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGEPLYPLTNSPSPQSPLGLTPVPSPISNIVSTSDPQPSTTFSPSPNTSTFSMSGNWCNAVMLPNSDDPLLSSSPKDFVPRRKLEINGVPLRLISNNGLIELNSSNFAGILVDANGEIKLFQTGGSTFQTKNILLTNTPLITHDIDDKCKKVIKTVQCTIPTKHVINRPKQINEIKKEDNNDVFLSPTSIPASPVRISRKRPRMEPLQLPVLHQSKLRATRSKPPGCARYTPQPILSPQRPGTGLYTNIKHRSEDGINWTSDPIPESDSTPHVNVGSQFQCKIPNFSSAPNRGSSEPTYEDLLWDPGISNCTDSEVDMYLDFACCAAVPGGGRNKEYAMHLLHMCGGNIHDAMLRLMQPSPNLPADHPLLAYQYCESDKWSTTETDIFHKSLLKYDKDFRNIAQEIRTKTVKQCVQFYYVWKKVCADEYRRLKHLRERRNYYYKHAEMDIDEKLFADVKLLGIADSGCPIPIPDTRNFVCEFPDCSASFNSRAALNGHIRIHGGTARNSPTPSSTTSERRTASVTSSSMCHPDSTEEYPCKICGKVFTKIKSRSAHMKSHRPPDAEPVKRKEKDTPSYELSVPSPFST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015119;
- 90% Identity
- iTF_00910662;
- 80% Identity
- iTF_00736121;